mRNA_L-elsbetiae_contig17400.4882.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: D7G8P0_ECTSI (Superoxide dismutase [Fe] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P0_ECTSI) HSP 1 Score: 230 bits (587), Expect = 6.070e-74 Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVVG 354 LAKAIDEAFGSMD+MKAQF TTAAGVFGSGWAWLGCT DGKLAITGTPNQDNPLM+GAA TAMVPILGLDVWEHAYYLKYQNRRPEYI AFWNVVNWAVVSENYEMYAS+GKGVPV G Sbjct: 183 LAKAIDEAFGSMDEMKAQFGTTAAGVFGSGWAWLGCTPDGKLAITGTPNQDNPLMEGAAGTAMVPILGLDVWEHAYYLKYQNRRPEYISAFWNVVNWAVVSENYEMYASQGKGVPVQG 300
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A835ZFH9_9STRA (Superoxide dismutase [Fe] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH9_9STRA) HSP 1 Score: 197 bits (500), Expect = 4.350e-61 Identity = 94/118 (79.66%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVVG 354 L AID +FGS D MK +F AAGVFGSGWAWLG TKDGKL IT TPNQDNPLM+GAACTAM+PILGLDVWEHAYYLKYQNRRPEYI AFWNVVNWA VSE YE YA K +GVPV G Sbjct: 158 LTMAIDASFGSFDAMKEKFGAAAAGVFGSGWAWLGVTKDGKLDITTTPNQDNPLMEGAACTAMIPILGLDVWEHAYYLKYQNRRPEYIAAFWNVVNWAKVSEYYEQYALKQEGVPVQG 275
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A7S2XZ78_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ78_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.070e-56 Identity = 86/118 (72.88%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVVG 354 LAKAIDEAFGSMD+MKA+F A G FGSGW+WLG DGKLA+ GTPNQDNPLM+GA T M ILG DVWEHAYYLKYQNRRPEY+ +WNVVNW VSE Y+ YASKG VPV G Sbjct: 53 LAKAIDEAFGSMDEMKAKFNAAATGQFGSGWSWLGVQADGKLAVVGTPNQDNPLMEGATATPMNVILGCDVWEHAYYLKYQNRRPEYVENWWNVVNWGYVSEIYDKYASKGMPVPVEG 170
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A8J5XSB1_DIALT (Superoxide dismutase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSB1_DIALT) HSP 1 Score: 172 bits (437), Expect = 1.170e-51 Identity = 83/115 (72.17%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVP 345 LA IDEAFGS D K +F+ +AG FGSGW WLG DGKLAI TPNQDNPLMDG T MVPILGLDVWEHAYYLKYQNRRPEYI +++NVVNW V+ NYE YASKG+GVP Sbjct: 152 LAAKIDEAFGSFDKFKEEFSAKSAGRFGSGWCWLGVKPDGKLAIDTTPNQDNPLMDGGCETKMVPILGLDVWEHAYYLKYQNRRPEYISSWFNVVNWEKVAFNYEKYASKGQGVP 266
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A7S0L727_9EUKA (Superoxide dismutase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L727_9EUKA) HSP 1 Score: 172 bits (435), Expect = 5.220e-51 Identity = 82/116 (70.69%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPV 348 LA ID AFGS D+ KA+F+ AAGVFGSGWAWL KDG + I TPNQDNPLMDGA +VPILG+DVWEHAYYLKYQNRRPEYI AF+NVVNWA V E Y+ YASKG+ VP+ Sbjct: 181 LATKIDAAFGSYDEFKAKFSAAAAGVFGSGWAWLAVAKDGSVQIVTTPNQDNPLMDGATEPGLVPILGIDVWEHAYYLKYQNRRPEYITAFYNVVNWAKVGEYYDEYASKGEPVPL 296
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: H8ZWH8_SACJA (Superoxide dismutase n=2 Tax=cellular organisms TaxID=131567 RepID=H8ZWH8_SACJA) HSP 1 Score: 169 bits (428), Expect = 5.400e-51 Identity = 83/118 (70.34%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVVG 354 LA AI+ AFGS D K +F+ A FGSGWAWL G+L + TPNQDNPLM A C PILGLDVWEHAYYLKYQNRRPEYI AFWNVVNWAVVSENYEMYAS G+GVPV G Sbjct: 96 LANAIESAFGSFDGFKDEFSGAAGSRFGSGWAWLCVHPGGELKVCSTPNQDNPLMPEAGCDGY-PILGLDVWEHAYYLKYQNRRPEYISAFWNVVNWAVVSENYEMYASAGRGVPVQG 212
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A7S3XQ28_HETAK (Superoxide dismutase [Fe] n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ28_HETAK) HSP 1 Score: 171 bits (433), Expect = 5.410e-51 Identity = 85/119 (71.43%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACT-AMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVVG 354 LA AIDEAFGSMD MK +F A G FGSGWAWLG DGKL I GTPNQDNPLM G AM PILGLDVWEHAYYL+Y+NRR EY+ FW +VNWA VS+NYE YASKG GVPV G Sbjct: 154 LATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 272
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A7S0JAI9_9EUKA (Superoxide dismutase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JAI9_9EUKA) HSP 1 Score: 167 bits (422), Expect = 7.130e-51 Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVP 345 LA ID AFGS D+ K F+ AAGVFGSGWAWL KDG + I TPNQDNPLM+GA +VPI+G+DVWEHAYYLKYQNRRPEYI AF+NVVNW V E Y+ YASKG+ VP Sbjct: 38 LAAKIDAAFGSYDEFKTAFSAAAAGVFGSGWAWLAVAKDGAVKIVTTPNQDNPLMEGATEAGLVPIMGIDVWEHAYYLKYQNRRPEYIAAFYNVVNWEKVGEYYDTYASKGEAVP 152
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: L1K0Q9_GUITC (Superoxide dismutase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0Q9_GUITC) HSP 1 Score: 169 bits (428), Expect = 3.630e-50 Identity = 81/117 (69.23%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVV 351 L KAID +FGSMD MK +F AA FGSGWAWLG T +GKLAIT TPNQDNPLM+G M+P+LGLDVWEHAYYLKYQNRRPEYI +W+VVNW VS NYE +A+KG V VV Sbjct: 162 LQKAIDASFGSMDKMKEEFNAAAAKRFGSGWAWLGVTPEGKLAITSTPNQDNPLMEGCEGQKMIPVLGLDVWEHAYYLKYQNRRPEYITNWWSVVNWEAVSNNYEKFAAKGIPVEVV 278
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Match: A0A7S1DDM0_HEMAN (Superoxide dismutase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DDM0_HEMAN) HSP 1 Score: 168 bits (426), Expect = 1.060e-49 Identity = 80/118 (67.80%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 1 LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAACTAMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGKGVPVVG 354 L KAIDEAFGS D M F+ AA FGSGWAWLG + +GKL I TPNQDNPLM+GA C M+P+LGLDVWEHAYYLKYQN+RPEYI AF++V+NW VVS+NY +A KG VPV G Sbjct: 175 LQKAIDEAFGSTDKMVEAFSGCAAKRFGSGWAWLGVSPEGKLVIDSTPNQDNPLMEGAGCAKMIPVLGLDVWEHAYYLKYQNKRPEYIKAFFSVINWGVVSKNYADFAVKGLPVPVQG 292 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17400.4882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17400.4882.1 >prot_L-elsbetiae_contig17400.4882.1 ID=prot_L-elsbetiae_contig17400.4882.1|Name=mRNA_L-elsbetiae_contig17400.4882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp LAKAIDEAFGSMDDMKAQFATTAAGVFGSGWAWLGCTKDGKLAITGTPNQback to top mRNA from alignment at L-elsbetiae_contig17400:65..1546+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17400.4882.1 ID=mRNA_L-elsbetiae_contig17400.4882.1|Name=mRNA_L-elsbetiae_contig17400.4882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig17400:65..1546+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17400:65..1546+ >mRNA_L-elsbetiae_contig17400.4882.1 ID=mRNA_L-elsbetiae_contig17400.4882.1|Name=mRNA_L-elsbetiae_contig17400.4882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig17400:65..1546+ (Laminarionema elsbetiae ELsaHSoW15)back to top |