mRNA_L-elsbetiae_contig1736.4858.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: D7FVH7_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH7_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 2.540e-15 Identity = 42/131 (32.06%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 +H AV H + +++L+DAGAN++ GGVTPL+A C+ + + + +++++ GA + D ++ + YA+ + + IL P VN + DG TPLY+A+ G+ V+ LLS GA Sbjct: 37 IHVAVIHHDRKCLKVLIDAGANLDVTYSGGVTPLMAACKMRV------EEHGIEMVKEVIEAGANPLIQDNKRWACLWYAINLGRIRTIQTILSVAPTTVNQVAPDGSTPLYMASGFGQYEAVSLLLSAGA 161
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.440e-11 Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 +HAAV +R LLDAGA+ NA D G TPL+ C F D R + R+LL+ GA+ + G ++HYA ++ +++ ++L +N + G TPL AA G +V LLS GA Sbjct: 86 VHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAAD------RYVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGA 210
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: A0A167MPK9_CORDF (Ankyrin repeat-containing domain protein n=1 Tax=Akanthomyces lecanii RCEF 1005 TaxID=1081108 RepID=A0A167MPK9_CORDF) HSP 1 Score: 68.6 bits (166), Expect = 6.530e-11 Identity = 42/131 (32.06%), Postives = 63/131 (48.09%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 LH A + +V +LL AGA+ +A D G TPL A C D K +AI R LL GA + +G + H AV+ +N+ L++ +L + V G ++ A+ G V +L+S GA Sbjct: 304 LHLAARYSSVAIVDILLSAGADADATDCSGTTPLFAACVR-------PDGKALAIVRFLLDHGASTHIASVSGEQAFHRAVKAQNIVLIEELLVRGTIEVGATDRKGRAGIHYASKEGNIDVVRYLISSGA 427
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: A0A8C3UJ89_CATUS (Euchromatic histone lysine methyltransferase 2 n=2 Tax=Passeriformes TaxID=9126 RepID=A0A8C3UJ89_CATUS) HSP 1 Score: 68.2 bits (165), Expect = 9.170e-11 Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 LHAA H ++ LLL AGAN+NAVD+ TPL+ E D ++ AR LL++G DG+ + +H+A + N+E+++++L V VN + G+TP+ AA + LL+RGA Sbjct: 146 LHAAAQKGHLEICHLLLQAGANINAVDKQRRTPLM---EAVAND-------QLEAARYLLRRGGCVYSKDGS--TCLHHAAKNGNLEMVELLLSTGQVDVNAQDNGGWTPIIWAAEHKHIEVIRRLLTRGA 264
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: A0A8C3MVW8_GEOPR (Uncharacterized protein n=1 Tax=Geospiza parvula TaxID=87175 RepID=A0A8C3MVW8_GEOPR) HSP 1 Score: 68.2 bits (165), Expect = 9.770e-11 Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQG--AEASVLDGT--GYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 LHAA H ++ LLL AGAN+NAVD+ TPL+ E D ++ AR LLQ+G A + V D G + +H+A + N+E+++++L V VN + G+TP+ AA + LL+RGA Sbjct: 427 LHAAAQKGHLEICHLLLQAGANINAVDKQRRTPLM---EAVAND-------QLETARYLLQRGGCAYSQVRDTPEDGSTCLHHAAKNGNLEMVELLLSTGQVDVNAQDSGGWTPIIWAAEHKHIEVIRRLLTRGA 551
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: UPI0014433D03 (transient receptor potential channel pyrexia-like n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI0014433D03) HSP 1 Score: 67.4 bits (163), Expect = 1.780e-10 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDD-SKRVAIARQLLQQGAEASVL-DGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSR 387 LH AV H H+ VV++L++A A+VNA D G TPL+ +P + SK V I + L+ A V TG + +H A + N E ++L G + G TPL+ AA +G G + ++L + Sbjct: 140 LHQAVQHNHSDVVKILVEANADVNAKDERGFTPLLLAGSNDEIRKNPKEMSKYVDIVKSLVAANASTDVFRKDTGTTVLHRAAELGNAEATQILLDGGASPYHQCIRYGNTPLHTAASVGSYGVLLNILKK 270
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 8.340e-10 Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 10 AVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 AVG+ A +V LL GAN NA D G TP++ C T S ++ + R LL+ GA+ +V + G ++H A + +++ ++L P +N+ + +G TPL AA G T++ L S GA Sbjct: 73 AVGNAGALLV--LLQLGANPNATDSDGGTPIMVTCGTGSV-----TSTKLTMMRSLLKAGADLAVENELGGLAIHIAAGRCDAQVVALLLSMAPSTLNNATHNGLTPLAAAAEKGNESTMSLLFSEGA 193
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: A0A8C8VQR5_9SAUR (Uncharacterized protein n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8VQR5_9SAUR) HSP 1 Score: 63.2 bits (152), Expect = 5.350e-9 Identity = 42/131 (32.06%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 LHAA H ++ +LL AGAN+NAVD+ TPL+ S +V AR ++++G DG+ + +H+A + N+ ++ ++L V VN + G+TP+ AA + LL+RGA Sbjct: 250 LHAAAQKGHLEICHVLLQAGANINAVDKMRRTPLMEAVV----------SNQVETARYIVRRGGCVYSKDGS--TCLHHAAKCGNLAMVSLLLATGQVDVNAQDNGGWTPIIWAAEHKHIEVIRLLLTRGA 368
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: UPI001EF8E83F (transient receptor potential channel pyrexia-like n=1 Tax=Diprion similis TaxID=362088 RepID=UPI001EF8E83F) HSP 1 Score: 63.2 bits (152), Expect = 5.370e-9 Identity = 45/129 (34.88%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLD-GTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLS 384 LH AV H +V LLLDAGAN +A D+ GVTPL T D D S+ I L+ A +++ TG +++H+AV + + +L G G TPL++AA G + LLS Sbjct: 150 LHQAVKAGHVDIVNLLLDAGANPDARDQRGVTPLHLAAVTVDPSDQMDMSRFERIVDALVSASASVNIVHPDTGTTALHHAVTLGSCKATKRLLEGGAWPTARCIGTGITPLHIAASAGFHDILRILLS 278
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Match: A0A8C8SUI2_9SAUR (Uncharacterized protein n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8SUI2_9SAUR) HSP 1 Score: 63.2 bits (152), Expect = 5.440e-9 Identity = 42/131 (32.06%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 1 LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSKRVAIARQLLQQGAEASVLDGTGYSSVHYAVQWENMELLDVILWGVPVAVNHRSEDGFTPLYLAAMLGRAGTVTHLLSRGA 393 LHAA H ++ +LL AGAN+NAVD+ TPL+ S +V AR ++++G DG+ + +H+A + N+ ++ ++L V VN + G+TP+ AA + LL+RGA Sbjct: 389 LHAAAQKGHLEICHVLLQAGANINAVDKMRRTPLMEAVV----------SNQVETARYIVRRGGCVYSKDGS--TCLHHAAKCGNLAMVSLLLATGQVDVNAQDNGGWTPIIWAAEHKHIEVIRLLLTRGA 507 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1736.4858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1736.4858.1 >prot_L-elsbetiae_contig1736.4858.1 ID=prot_L-elsbetiae_contig1736.4858.1|Name=mRNA_L-elsbetiae_contig1736.4858.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp LHAAVGHLHAQVVRLLLDAGANVNAVDRGGVTPLIALCETFPGDDDPDDSback to top mRNA from alignment at L-elsbetiae_contig1736:22922..23314- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1736.4858.1 ID=mRNA_L-elsbetiae_contig1736.4858.1|Name=mRNA_L-elsbetiae_contig1736.4858.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=393bp|location=Sequence derived from alignment at L-elsbetiae_contig1736:22922..23314- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1736:22922..23314- >mRNA_L-elsbetiae_contig1736.4858.1 ID=mRNA_L-elsbetiae_contig1736.4858.1|Name=mRNA_L-elsbetiae_contig1736.4858.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig1736:22922..23314- (Laminarionema elsbetiae ELsaHSoW15)back to top |