mRNA_L-elsbetiae_contig1716.4771.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI) HSP 1 Score: 432 bits (1111), Expect = 4.460e-149 Identity = 222/235 (94.47%), Postives = 225/235 (95.74%), Query Frame = 1 Query: 1 MATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQK 705 MATDSVELLALQRIDETCMQLQQQG+YLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGA + GG G DQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV + Sbjct: 1 MATDSVELLALQRIDETCMQLQQQGDYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGATVGDAGGEGG--DQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVTAR 233
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 388 bits (997), Expect = 2.060e-130 Identity = 200/259 (77.22%), Postives = 221/259 (85.33%), Query Frame = 1 Query: 10 DSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARD 786 D+ ELLALQRIDETCMQLQQQGNYL+ALECMERGLVLRQHFFG++SEEVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD G+AVTYNNLACYYRR+GKLHSALQYL KALKIE+KM VE+PADTHLNTCAVLSQ+GRH ALEHAQS++ILLQEELF G D PR DR+AVL IAYHN+GVEQEFLKK+E S+ SYRKGVEV +++LG HA+TVTLRNS +AARRA+ ARD Sbjct: 63 DNAELLALQRIDETCMQLQQQGNYLEALECMERGLVLRQHFFGAESEEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDQKGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMKD-VENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEELFQG--------------DGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A836CET2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET2_9STRA) HSP 1 Score: 383 bits (984), Expect = 6.070e-129 Identity = 199/240 (82.92%), Postives = 215/240 (89.58%), Query Frame = 1 Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGA-----AIAGVGG-GAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQK 705 A DS ELLALQRIDETCMQLQQQGNYL+ALECMERGLVLRQHFFGSDS+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD G+AVT NNLACYYRR+GKLH+ALQYL +ALKIEA++GSRV+ PADTHLNTCAVLSQ+GRHQGAL+HAQSALILLQEELFGGG+ + AG G G G PRADR+AVLAIAYHNMGVEQEFLK+F+HSLQSYRKGVEVAQK Sbjct: 3 AADSAELLALQRIDETCMQLQQQGNYLEALECMERGLVLRQHFFGSDSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDAVGKAVTLNNLACYYRRQGKLHAALQYLQRALKIEARLGSRVQTPADTHLNTCAVLSQLGRHQGALDHAQSALILLQEELFGGGSRALPSSCAGDGELGLGLSQASPRADRVAVLAIAYHNMGVEQEFLKRFDHSLQSYRKGVEVAQK 242
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 383 bits (983), Expect = 1.220e-128 Identity = 200/263 (76.05%), Postives = 229/263 (87.07%), Query Frame = 1 Query: 10 DSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSTMR 798 ++ ELLALQRIDETC QLQ QGNYL+ALECMERGLVLRQHFFG+DS+EVW ACK+VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD+AGRAVT+NNLACYYRR+GKLH+ALQYL KALKIE K+ +V++PADT+LNTCAVLSQ+GRHQ ALEHAQ ALILLQEEL + V G G++ P+ADRIAVLAIAYHN+GVE EFLKKF+ SLQSYRKGVEV++++LG +HA+TVTLRNS +AARRAI RD R Sbjct: 7 NNAELLALQRIDETCKQLQTQGNYLEALECMERGLVLRQHFFGADSDEVWRACKVVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKL-DQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL-------SRVLGPMADGNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQAR 261
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA) HSP 1 Score: 383 bits (984), Expect = 1.260e-128 Identity = 200/262 (76.34%), Postives = 228/262 (87.02%), Query Frame = 1 Query: 13 SVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSTMR 798 + ELLALQRIDETC +LQQQGNYL+ALECMERGLVLRQHFFG++S+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD AGRAVT+NNLACYYRR+GKLHSALQYL ALKIEAK+ +RV++PADT+LNTCAVLSQ+GRHQ ALEHAQ ALILLQEEL + V G G + P+ADRIAVLAI+YHN+GVE EFLKKF+ SLQSYRKGVEVA+++LG HA+T+TLRNS +AA+RAI ARD +R Sbjct: 16 NAELLALQRIDETCRKLQQQGNYLEALECMERGLVLRQHFFGAESDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHSALQYLQNALKIEAKL-ARVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL-------SRVVGPMADGKEAPKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA) HSP 1 Score: 373 bits (958), Expect = 6.500e-125 Identity = 198/263 (75.29%), Postives = 221/263 (84.03%), Query Frame = 1 Query: 10 DSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSTMR 798 D+ ELLALQRIDETC QQ G YL+ALECMERGLVLRQHFFG+ S+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD AGRAVT+NNLACYYRR+GKLH+ALQYL KALKIE ++ S V++PADT+LN CAVLSQ+GRHQ ALEHAQ ALILLQEEL + V G AG PP+ADR+AVLAIAYHN+GVEQEFLKK SLQSYRKGVEVA++YLGG+HA+T TLRNS +AARR + ARD R Sbjct: 15 DNAELLALQRIDETCTNFQQNGQYLEALECMERGLVLRQHFFGAGSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIEGRLES-VDNPADTYLNACAVLSQLGRHQSALEHAQQALILLQEEL-------SSVLGSDNAG--PPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARDPQAR 267
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA) HSP 1 Score: 375 bits (962), Expect = 6.890e-123 Identity = 194/262 (74.05%), Postives = 227/262 (86.64%), Query Frame = 1 Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGG-AGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARD 786 + ++ ELLALQRIDETC+QLQQ GNYL+ALECMERGLVLRQHFFGSDS EVWSAC+ VGEMCNLLAMTYLQQ+D+ MVLELLKKAEILTERDD GRAVT+NN ACYYRR+GKLH+ALQ+L KAL+IE+++ V + ADT+LNTCAVLSQ+GRHQ ALEHAQ+ALILLQEELF G AG+GG AG P DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+++LGG+HA+ +TLRNS AARRA +++D Sbjct: 112 SNETAELLALQRIDETCVQLQQSGNYLEALECMERGLVLRQHFFGSDSNEVWSACRTVGEMCNLLAMTYLQQQDYAMVLELLKKAEILTERDDKGRAVTFNNFACYYRRQGKLHAALQFLQKALRIESRLVD-VPNAADTYLNTCAVLSQLGRHQSALEHAQNALILLQEELFHGIEGGAGMGGEEAGLAPPNPPKDRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKD 372
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA) HSP 1 Score: 357 bits (916), Expect = 2.740e-118 Identity = 184/256 (71.88%), Postives = 219/256 (85.55%), Query Frame = 1 Query: 13 SVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISA 780 + E+LALQR+DET QLQ+QGNYL+ALECMERGLVLRQHFFG+DS EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTE+D+AGRA T+NNLACYYRR+GKLH+ALQYL KALKIE+ + + V++PADTH+N CAVLSQ+GRHQ AL+HAQ+A+ILLQEEL + GV G A PP+ADRIAVLAIAYHN+GVEQEFLK++E S+ SY+KGVEVA++YLG HA+ VTL NS +AA++ +A Sbjct: 4 NAEVLALQRLDETSAQLQKQGNYLEALECMERGLVLRQHFFGADSPEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDEAGRAATFNNLACYYRRQGKLHAALQYLQKALKIESGL-TNVQNPADTHINACAVLSQLGRHQTALDHAQNAIILLQEELL----SPPGVVGAA-----PPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A024U4G6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4G6_9STRA) HSP 1 Score: 323 bits (827), Expect = 8.750e-105 Identity = 176/262 (67.18%), Postives = 201/262 (76.72%), Query Frame = 1 Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDS 789 A + EL ALQR+D C +LQQ+G Y +ALECME+GLVLRQHFFGSDS EV ACK VG+MCNLLAMTYLQQE+F +VLELLKKAEILTER AGRAVT NN ACYYRR+G LH AL +L +AL IEAK+ V + ADTHLN CAVLSQ+GRHQGALE AQ+ALILL EELF A G G+ D + DRIAVL IAYHN+GVEQEFLKK E S+ SYRKG EVA KYLG +H + +TLRNS + A RA+ AR S Sbjct: 27 AVEDQELYALQRLDTKCTELQQEGKYTEALECMEKGLVLRQHFFGSDSPEVRDACKTVGDMCNLLAMTYLQQENFPIVLELLKKAEILTERHPAGRAVTLNNFACYYRRQGNLHKALTHLTEALAIEAKL-EHVPNRADTHLNMCAVLSQLGRHQGALEQAQAALILLHEELFS--APTPGNQHGSPVADASVKLDRIAVLGIAYHNVGVEQEFLKKLELSIHSYRKGAEVAAKYLGESHGMVITLRNSLVTATRALEARAS 285
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Match: A0A2R5G2B1_9STRA (Clustered mitochondria protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2B1_9STRA) HSP 1 Score: 341 bits (875), Expect = 3.870e-103 Identity = 178/256 (69.53%), Postives = 211/256 (82.42%), Query Frame = 1 Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAIAGVGGGAGAGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRA 771 A + ELLAL RIDET +LQQQG YL+ALECMERGLVLRQHFFG S+EVW+ACK VG+MCNLLAMTYLQQE+F MVLELLKKAEILTERD+ GRAVTYNNLACY+RR GKLH+ALQYL KALK+E+++ V + ADTHLN CAVLSQ+GRH GALEHAQ+ALI LQEELF G + + + A DRIAVLAIAYHN+GVEQEFLK+FE ++ SYRKGV++++ +LG +H +TVTLRNS +AAR+A Sbjct: 440 AEANAELLALHRIDETSTRLQQQGKYLEALECMERGLVLRQHFFGPSSDEVWAACKTVGQMCNLLAMTYLQQEEFSMVLELLKKAEILTERDEHGRAVTYNNLACYFRRTGKLHAALQYLQKALKVESRL-ENVTNRADTHLNLCAVLSQLGRHAGALEHAQAALIQLQEELFPGALSASAKSSSSAA---LASTDRIAVLAIAYHNIGVEQEFLKRFEMAIDSYRKGVDISETHLGTDHGITVTLRNSYLAARQA 691 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1716.4771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1716.4771.1 >prot_L-elsbetiae_contig1716.4771.1 ID=prot_L-elsbetiae_contig1716.4771.1|Name=mRNA_L-elsbetiae_contig1716.4771.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=445bp MATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEback to top mRNA from alignment at L-elsbetiae_contig1716:4589..7886- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1716.4771.1 ID=mRNA_L-elsbetiae_contig1716.4771.1|Name=mRNA_L-elsbetiae_contig1716.4771.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3298bp|location=Sequence derived from alignment at L-elsbetiae_contig1716:4589..7886- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1716:4589..7886- >mRNA_L-elsbetiae_contig1716.4771.1 ID=mRNA_L-elsbetiae_contig1716.4771.1|Name=mRNA_L-elsbetiae_contig1716.4771.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2670bp|location=Sequence derived from alignment at L-elsbetiae_contig1716:4589..7886- (Laminarionema elsbetiae ELsaHSoW15)back to top |