mRNA_L-elsbetiae_contig17119.4757.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: D8LIM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM0_ECTSI) HSP 1 Score: 234 bits (597), Expect = 9.650e-69 Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 1 Query: 70 MRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRGSTGQQ 465 MRMAGLEVDKLYS DRR VLLKIRLPR KLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFS G GDLFRSGESQKVIDHLIRAKIKDGGSELDDR+ELGKHICKRMPLHNQ RL ALY +WVVYWRG + QQ Sbjct: 1 MRMAGLEVDKLYSLDRRHVLLKIRLPRIKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSGGTSGDLFRSGESQKVIDHLIRAKIKDGGSELDDRTELGKHICKRMPLHNQARLQALYDSWVVYWRGPSQQQ 132
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A482RUE1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUE1_9ARCH) HSP 1 Score: 151 bits (382), Expect = 5.480e-39 Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 1 Query: 10 GAPPEF----FLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSE-GAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRGST 456 GAPP FLGW S GTQIW+R+++AGL+V +YS+D RV+LK++ P +LE++AE MR+K++ R G + F+ R SF GA G++FRS E Q+VID+++R+KI DGG+ELD+ +ELGK I +R PLH RL + WV +W+ T Sbjct: 195 GAPPSLPIAQFLGWNSAGTQIWARLKLAGLDVKVVYSYDLYRVILKLKCPAWRLEQMAEQMRIKIKTRGGYMKPFRVSRRDSFIPYGAMGNIFRSSERQQVIDYILRSKICDGGAELDEHTELGKFIVQRFPLHMYSRLQEIRHGWVTFWKRET 348
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S4HJC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJC6_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.490e-38 Identity = 76/166 (45.78%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF--SEGAGG--------------------DLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447 P ++FLG+ S GTQIWSR+R AGLE ++Y+ D RRV++K+R P +L +VAEV+RLK++ RDGT F++ F +E GG LFRS E Q +ID +IR++I+D G+EL +R+ELGK + R+PLH RL+ALYG WV++WR Sbjct: 593 PSDYFLGFKSSGTQIWSRLRQAGLETQRIYALDSRRVMIKVRCPADRLMDVAEVLRLKLKTRDGTYTAFRESIMHQFLPTEDVGGISSSARSSDTSLLSASHYGARLFRSSERQTIIDFIIRSRIRDSGAELGERTELGKAVELRVPLHMHARLEALYGTWVLFWR 758
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S1TPM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPM3_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.630e-35 Identity = 62/133 (46.62%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 19 PEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGG-DLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLD 414 P FFLGWT+PGTQIW+R+RMAGL V +++ + + V+LKI +P+++LE+VAE M +K+ ++ G RF+ + F + G FRS + Q VID +IR++I+DGG+EL +++ LG+HI +R+PLH RL+ Sbjct: 28 PNFFLGWTAPGTQIWARLRMAGLIVKRIFDINTQVVILKITIPQTRLEQVAEAMHVKILKKGGGWDRFRVAKKDDFVQRPGSKSCFRSSDRQLVIDFIIRSRIRDGGAELGEQTALGRHIARRLPLHMITRLE 160
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S2EGT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGT0_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.730e-35 Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 1 Query: 16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDH------------RSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447 P ++FLG+ S GTQIWSR+R AGLE ++Y+ D++RV++K+R P +L +VAEV+RLK++ RDG F++ R S+S LFRS E Q +ID +IR++I+D G+EL ++LGK I R+PLH RL++LY WV+YW+ Sbjct: 776 PSDYFLGFKSSGTQIWSRLRQAGLETTRIYALDKKRVMIKLRCPPERLMDVAEVLRLKLKTRDGVYAPFRESMISQYLPTNDGVPRESYSSNPA-SLFRSSERQAIIDFIIRSRIRDSGAELGQGTDLGKKIHLRVPLHMHARLESLYEGWVLYWK 930
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: K0TEN3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEN3_THAOC) HSP 1 Score: 141 bits (355), Expect = 2.360e-35 Identity = 68/161 (42.24%), Postives = 104/161 (64.60%), Query Frame = 1 Query: 1 VLGGAPPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGG------------DLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447 V+ P ++FLG+ SPGTQIWSR+R AGLE ++Y+ D RRV+LK+R P +LE+VAE ++LK++ + G F++D + F G LFRS E Q++I ++ +KI+D G+EL+ L K I KR+PLH+ RL++LY +WV++W+ Sbjct: 694 VIQAPPSDYFLGYGSPGTQIWSRLRSAGLETQRVYALDTRRVMLKVRCPVDRLEDVAEALKLKLKTKSGDYVPFREDLITEFVPTDDGFVSCEDNVERVISLFRSSERQRIISFIMNSKIRDSGAELEPSERLSKSIQKRVPLHSHARLESLYSSWVLFWK 854
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S3QEB7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEB7_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.410e-35 Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 13 APP-EFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF-----SEGA----GGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447 APP +FFLG+ SPGTQIW R+R AGLE D++Y+ D RRV++K+R P +L +VAEV+RLK++ DG F++D +F SE G LFRS + Q+++D +I ++I+D G++L ++LGK+I R P+H +L+A+Y WV ++R Sbjct: 1172 APPSDFFLGFRSPGTQIWGRLRQAGLETDRIYALDTRRVMIKVRCPADRLMDVAEVLRLKMKTNDGYYATFREDMIEAFQIADDSESCLSKQGSSLFRSSDRQRILDFIINSRIRDSGAQLSGHNDLGKNIMCRAPIHMHAKLEAIYDVWVHFYR 1326
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: B8BRZ9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRZ9_THAPS) HSP 1 Score: 136 bits (342), Expect = 1.320e-33 Identity = 65/152 (42.76%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 7 GGAPP-EFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRD--GTIGRFKKDHRSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRGS 453 G APP ++FLG++SPGTQIW R+R AGL+ ++Y+ D R+V++K+R P +L++VAE ++LK++ +D G + D + + LFRS + QK+ID +I ++I+D G+EL ++LGK + +R+PLH+ RL+ LY WV+YW S Sbjct: 706 GVAPPSDYFLGFSSPGTQIWGRLRQAGLDTQRVYALDTRKVMIKVRCPIDRLQDVAEALKLKLKTKDDDGFVSCDDYDEKVA-------SLFRSSDRQKIIDFIIGSRIRDSGAELGPSTQLGKQVQRRVPLHSHARLEILYSCWVLYWNQS 850
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S2JXK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXK3_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.000e-33 Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 1 Query: 16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF-----------------SEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447 P ++FLG++S GT+IW+R+R AGLE ++Y DR+RV+L +R P +L++VAEV+RLK+R +DG F++ H F + G LFRS + Q +I+ ++++K+ D G++L + LGKHI +PLHN+ RL+ L+ AWV +W+ Sbjct: 516 PSDYFLGFSSAGTKIWARLRQAGLETQRVYGLDRKRVMLLVRCPEDRLQDVAEVIRLKLRTKDGLFLPFRETHSHIFLRNSETSENANPEQKSGNTGPNDSLFRSADRQFIINFILQSKLHDTGADLGPSNSLGKHITNHVPLHNRARLEDLFYAWVYFWK 676
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A1Z5KN45_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN45_FISSO) HSP 1 Score: 130 bits (327), Expect = 1.350e-31 Identity = 65/156 (41.67%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKD------------HRSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447 P ++FLG+ SPGT IWSR+R AGLE ++Y+ DRR V++KIR P +L +VAEV+RLK++ RDG+ F++D + S S G F S Q +ID ++ ++I+D G+EL ++LGK I R+PLH +LDA++ +W +W+ Sbjct: 870 PSDYFLGFRSPGTSIWSRLRQAGLETQRVYALDRRSVMIKIRCPNDRLMDVAEVLRLKLKTRDGSFAPFREDMIEFYHDLNDPLEKLSGSCDPDGFQFPSAFRQTIIDFIVGSRIRDTGAELGQNTDLGKLIQARVPLHMPEKLDAIFNSWFYFWK 1025 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17119.4757.1 >prot_L-elsbetiae_contig17119.4757.1 ID=prot_L-elsbetiae_contig17119.4757.1|Name=mRNA_L-elsbetiae_contig17119.4757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp VLGGAPPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRback to top mRNA from alignment at L-elsbetiae_contig17119:213..2701- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17119.4757.1 ID=mRNA_L-elsbetiae_contig17119.4757.1|Name=mRNA_L-elsbetiae_contig17119.4757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2489bp|location=Sequence derived from alignment at L-elsbetiae_contig17119:213..2701- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17119:213..2701- >mRNA_L-elsbetiae_contig17119.4757.1 ID=mRNA_L-elsbetiae_contig17119.4757.1|Name=mRNA_L-elsbetiae_contig17119.4757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig17119:213..2701- (Laminarionema elsbetiae ELsaHSoW15)back to top |