mRNA_L-elsbetiae_contig17119.4757.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17119.4757.1
Unique NamemRNA_L-elsbetiae_contig17119.4757.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: D8LIM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM0_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 9.650e-69
Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 1
Query:   70 MRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRGSTGQQ 465
            MRMAGLEVDKLYS DRR VLLKIRLPR KLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFS G  GDLFRSGESQKVIDHLIRAKIKDGGSELDDR+ELGKHICKRMPLHNQ RL ALY +WVVYWRG + QQ
Sbjct:    1 MRMAGLEVDKLYSLDRRHVLLKIRLPRIKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSGGTSGDLFRSGESQKVIDHLIRAKIKDGGSELDDRTELGKHICKRMPLHNQARLQALYDSWVVYWRGPSQQQ 132          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A482RUE1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUE1_9ARCH)

HSP 1 Score: 151 bits (382), Expect = 5.480e-39
Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 1
Query:   10 GAPPEF----FLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSE-GAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRGST 456
            GAPP      FLGW S GTQIW+R+++AGL+V  +YS+D  RV+LK++ P  +LE++AE MR+K++ R G +  F+   R SF   GA G++FRS E Q+VID+++R+KI DGG+ELD+ +ELGK I +R PLH   RL  +   WV +W+  T
Sbjct:  195 GAPPSLPIAQFLGWNSAGTQIWARLKLAGLDVKVVYSYDLYRVILKLKCPAWRLEQMAEQMRIKIKTRGGYMKPFRVSRRDSFIPYGAMGNIFRSSERQQVIDYILRSKICDGGAELDEHTELGKFIVQRFPLHMYSRLQEIRHGWVTFWKRET 348          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S4HJC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJC6_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.490e-38
Identity = 76/166 (45.78%), Postives = 107/166 (64.46%), Query Frame = 1
Query:   16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF--SEGAGG--------------------DLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447
            P ++FLG+ S GTQIWSR+R AGLE  ++Y+ D RRV++K+R P  +L +VAEV+RLK++ RDGT   F++     F  +E  GG                     LFRS E Q +ID +IR++I+D G+EL +R+ELGK +  R+PLH   RL+ALYG WV++WR
Sbjct:  593 PSDYFLGFKSSGTQIWSRLRQAGLETQRIYALDSRRVMIKVRCPADRLMDVAEVLRLKLKTRDGTYTAFRESIMHQFLPTEDVGGISSSARSSDTSLLSASHYGARLFRSSERQTIIDFIIRSRIRDSGAELGERTELGKAVELRVPLHMHARLEALYGTWVLFWR 758          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S1TPM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPM3_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.630e-35
Identity = 62/133 (46.62%), Postives = 96/133 (72.18%), Query Frame = 1
Query:   19 PEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGG-DLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLD 414
            P FFLGWT+PGTQIW+R+RMAGL V +++  + + V+LKI +P+++LE+VAE M +K+ ++ G   RF+   +  F +  G    FRS + Q VID +IR++I+DGG+EL +++ LG+HI +R+PLH   RL+
Sbjct:   28 PNFFLGWTAPGTQIWARLRMAGLIVKRIFDINTQVVILKITIPQTRLEQVAEAMHVKILKKGGGWDRFRVAKKDDFVQRPGSKSCFRSSDRQLVIDFIIRSRIRDGGAELGEQTALGRHIARRLPLHMITRLE 160          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S2EGT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGT0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.730e-35
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 1
Query:   16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDH------------RSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447
            P ++FLG+ S GTQIWSR+R AGLE  ++Y+ D++RV++K+R P  +L +VAEV+RLK++ RDG    F++              R S+S      LFRS E Q +ID +IR++I+D G+EL   ++LGK I  R+PLH   RL++LY  WV+YW+
Sbjct:  776 PSDYFLGFKSSGTQIWSRLRQAGLETTRIYALDKKRVMIKLRCPPERLMDVAEVLRLKLKTRDGVYAPFRESMISQYLPTNDGVPRESYSSNPA-SLFRSSERQAIIDFIIRSRIRDSGAELGQGTDLGKKIHLRVPLHMHARLESLYEGWVLYWK 930          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: K0TEN3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEN3_THAOC)

HSP 1 Score: 141 bits (355), Expect = 2.360e-35
Identity = 68/161 (42.24%), Postives = 104/161 (64.60%), Query Frame = 1
Query:    1 VLGGAPPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGG------------DLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447
            V+   P ++FLG+ SPGTQIWSR+R AGLE  ++Y+ D RRV+LK+R P  +LE+VAE ++LK++ + G    F++D  + F     G             LFRS E Q++I  ++ +KI+D G+EL+    L K I KR+PLH+  RL++LY +WV++W+
Sbjct:  694 VIQAPPSDYFLGYGSPGTQIWSRLRSAGLETQRVYALDTRRVMLKVRCPVDRLEDVAEALKLKLKTKSGDYVPFREDLITEFVPTDDGFVSCEDNVERVISLFRSSERQRIISFIMNSKIRDSGAELEPSERLSKSIQKRVPLHSHARLESLYSSWVLFWK 854          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S3QEB7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEB7_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.410e-35
Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 1
Query:   13 APP-EFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF-----SEGA----GGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447
            APP +FFLG+ SPGTQIW R+R AGLE D++Y+ D RRV++K+R P  +L +VAEV+RLK++  DG    F++D   +F     SE      G  LFRS + Q+++D +I ++I+D G++L   ++LGK+I  R P+H   +L+A+Y  WV ++R
Sbjct: 1172 APPSDFFLGFRSPGTQIWGRLRQAGLETDRIYALDTRRVMIKVRCPADRLMDVAEVLRLKMKTNDGYYATFREDMIEAFQIADDSESCLSKQGSSLFRSSDRQRILDFIINSRIRDSGAQLSGHNDLGKNIMCRAPIHMHAKLEAIYDVWVHFYR 1326          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: B8BRZ9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRZ9_THAPS)

HSP 1 Score: 136 bits (342), Expect = 1.320e-33
Identity = 65/152 (42.76%), Postives = 104/152 (68.42%), Query Frame = 1
Query:    7 GGAPP-EFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRD--GTIGRFKKDHRSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRGS 453
            G APP ++FLG++SPGTQIW R+R AGL+  ++Y+ D R+V++K+R P  +L++VAE ++LK++ +D  G +     D + +        LFRS + QK+ID +I ++I+D G+EL   ++LGK + +R+PLH+  RL+ LY  WV+YW  S
Sbjct:  706 GVAPPSDYFLGFSSPGTQIWGRLRQAGLDTQRVYALDTRKVMIKVRCPIDRLQDVAEALKLKLKTKDDDGFVSCDDYDEKVA-------SLFRSSDRQKIIDFIIGSRIRDSGAELGPSTQLGKQVQRRVPLHSHARLEILYSCWVLYWNQS 850          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A7S2JXK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXK3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.000e-33
Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF-----------------SEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447
            P ++FLG++S GT+IW+R+R AGLE  ++Y  DR+RV+L +R P  +L++VAEV+RLK+R +DG    F++ H   F                 + G    LFRS + Q +I+ ++++K+ D G++L   + LGKHI   +PLHN+ RL+ L+ AWV +W+
Sbjct:  516 PSDYFLGFSSAGTKIWARLRQAGLETQRVYGLDRKRVMLLVRCPEDRLQDVAEVIRLKLRTKDGLFLPFRETHSHIFLRNSETSENANPEQKSGNTGPNDSLFRSADRQFIINFILQSKLHDTGADLGPSNSLGKHITNHVPLHNRARLEDLFYAWVYFWK 676          
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Match: A0A1Z5KN45_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN45_FISSO)

HSP 1 Score: 130 bits (327), Expect = 1.350e-31
Identity = 65/156 (41.67%), Postives = 99/156 (63.46%), Query Frame = 1
Query:   16 PPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKD------------HRSSFSEGAGGDLFRSGESQKVIDHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWR 447
            P ++FLG+ SPGT IWSR+R AGLE  ++Y+ DRR V++KIR P  +L +VAEV+RLK++ RDG+   F++D             + S S    G  F S   Q +ID ++ ++I+D G+EL   ++LGK I  R+PLH   +LDA++ +W  +W+
Sbjct:  870 PSDYFLGFRSPGTSIWSRLRQAGLETQRVYALDRRSVMIKIRCPNDRLMDVAEVLRLKLKTRDGSFAPFREDMIEFYHDLNDPLEKLSGSCDPDGFQFPSAFRQTIIDFIVGSRIRDTGAELGQNTDLGKLIQARVPLHMPEKLDAIFNSWFYFWK 1025          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17119.4757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LIM0_ECTSI9.650e-6989.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RUE1_9ARCH5.480e-3948.70Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S4HJC6_9STRA3.490e-3845.78Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S1TPM3_9STRA1.630e-3546.62Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2EGT0_9STRA1.730e-3544.87Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
K0TEN3_THAOC2.360e-3542.24Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S3QEB7_9STRA2.410e-3544.52Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8BRZ9_THAPS1.320e-3342.76Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2JXK3_9STRA4.000e-3339.75Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1Z5KN45_FISSO1.350e-3141.67Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17119contigL-elsbetiae_contig17119:213..2701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.3
Seed ortholog evalue2.3e-59
Seed eggNOG ortholog2880.D8LIM0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2513@1,KOG2513@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size575
Cds size573
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17119.4757.1prot_L-elsbetiae_contig17119.4757.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17119 213..2701 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815713.944624-CDS-L-elsbetiae_contig17119:212..4911622815713.944624-CDS-L-elsbetiae_contig17119:212..491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17119 213..491 -
1691683054.6811442-CDS-L-elsbetiae_contig17119:212..4911691683054.6811442-CDS-L-elsbetiae_contig17119:212..491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17119 213..491 -
1622815713.9596004-CDS-L-elsbetiae_contig17119:1327..14561622815713.9596004-CDS-L-elsbetiae_contig17119:1327..1456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17119 1328..1456 -
1691683054.700682-CDS-L-elsbetiae_contig17119:1327..14561691683054.700682-CDS-L-elsbetiae_contig17119:1327..1456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17119 1328..1456 -
1622815713.9727514-CDS-L-elsbetiae_contig17119:2536..27011622815713.9727514-CDS-L-elsbetiae_contig17119:2536..2701Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17119 2537..2701 -
1691683054.7125497-CDS-L-elsbetiae_contig17119:2536..27011691683054.7125497-CDS-L-elsbetiae_contig17119:2536..2701Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17119 2537..2701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17119.4757.1

>prot_L-elsbetiae_contig17119.4757.1 ID=prot_L-elsbetiae_contig17119.4757.1|Name=mRNA_L-elsbetiae_contig17119.4757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp
VLGGAPPEFFLGWTSPGTQIWSRMRMAGLEVDKLYSFDRRRVLLKIRLPR
SKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSFSEGAGGDLFRSGESQKVI
DHLIRAKIKDGGSELDDRSELGKHICKRMPLHNQGRLDALYGAWVVYWRG
STGQQQQQQQAQQQEQQRRLELRIRRRKGQGKTRVDSKGE*
back to top

mRNA from alignment at L-elsbetiae_contig17119:213..2701-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17119.4757.1 ID=mRNA_L-elsbetiae_contig17119.4757.1|Name=mRNA_L-elsbetiae_contig17119.4757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2489bp|location=Sequence derived from alignment at L-elsbetiae_contig17119:213..2701- (Laminarionema elsbetiae ELsaHSoW15)
GTCCTGGGCGGAGCCCCTCCAGAGTTTTTCCTGGGCTGGACGAGCCCGGG GACCCAGATCTGGTCCCGGATGCGCATGGCGGGGCTCGAGGTGGACAAGC TCTACAGCTTCGACCGGCGTCGCGTGCTTCTCAAGATCAGGCTGCCGAGG AGCAAGCTGGAGGAGGTGAGCGAGCGGCGGCGCTGTTTAGACCATCGGCG CTGTATGTATTTATGTATGTATGTTTGTATGTGGCATGTAGGTAGTTTGC TCGTTTTTTTGTCTTCCTTTTTTTTTTTTTAACATAAATATATCTGTAAT CAAACATTTCACCACTGGGCCCCCCAGGGGGTGCCCTGTGACCAAGCATT CCACTCGGTATTGTGACCCAAGATTCCACTTCGTGGCTCGAGGGGTTTTT CTCTTCCATGTTTTTTTTTTTTTTTTCGCATGTATTGCCAGTGCTCGAAG GGCTCCTTGCGACGAGGGCATTTTGCCAAGAGTATTGACCCGTGGTCACA CAGAAGCGGTCCTCTCCCCGAGGCCCCCACTCCCCCCCTCTTCGGTGCTT GCCTACGTAATATTTTTTTATCGTGAGAGAGGGTTATGTCTGAAGCAATT TGACCGCCCACATATGATACATAGAAAAGCAAGAGAGGGCGAAAAGGACC TCGGACAAGATAAGACGCGAGCCAAAAGGATGAACAAACAAACAGACACA CAGACACCCGTAAGCTCCAGACAAGATAAGAAACAAACACTCATCACTCC TGCGGTGGGTGGTGCAGTGTTGTAGATACAACCTTCCACGAAATTATCGA ATCTCGTGCTTGTCTGTAAGCTATGTGCGTGTATTTCTACTTGTCGTATT ATGTGTACATATGTTTTCATCGCAAGCTTTTAGTTTTTTGGTCTGCGTAT TGTCGGATAGGACGGGACACGAGGAACGCAATGAACGCGAGGCTCGGGTT GCGAGATTCGGGGAAGGTACCTACCTCGGTGCATCGGTCGGAGGAGGAAG AGCAGGGCAAATGCTGACACTTGCTTTCTCGCGGCTTGTTGATCTTTGTC ATGGGGGGTTCGTGAATGTATATTCATACTGTACCCCCCAACGGATAGCG GCAGAAGCGACCCACCCACCCCCAGCCGATGTGTGTGTTTTTTTAATTTT TTTTTAGTTTTTTTATGAGAGTGCGTTTTGTCTACACACACTATTATTAC GCCCCGACACGTACGTCTCTTCTGCGTGTTTTTTTGCTCATCAAGGTGGC CGAAGTGATGAGGCTGAAGGTCCGGAGGCGCGACGGCACCATCGGCCGCT TCAAGAAGGATCACCGCAGCTCCTTCTCTGAGGGTGCGGGGGGCGACCTA TTCCGGTCAGGGGAGAGCCAGAAGGTATTTATGACACAAGATAACACACC CCCTGGATCGATTTTTAAACGTCAAGTGTCAGCCCCGGAAAGGGCGTCAG CCCCGGAAAGGGCGTCAGCCCCGGAAAGGGCGGCGTTGGAAAGATTTAGA TTTCATCAACAGCTGTTCGAAGATTTCATCAAGAGCTGTTCGAAGACGTG TCGTTTTGGCATTATAACCACACTCGTTGCAGAGCTTTCGAGCTTTGAAA ATCGGTCCAGGGGGTGTGTTATCTTGTGTCGTATATCTTATACGGGTATG CCACACGCATACCGCCGTGGGTTGTCGCGGGAGAGAGTCCTGCACGTGCC TGACTGTCCGACCCCCGGTGTGTGTCCCATTACCATCCCATTAAATGATG GTATATGTAGGCTTCCCGCAGCAGGGCCCCCAATTCTCAAAAGTGGCTCC GTGGGGGATTTTTCACCCTGTTTATTTCCTATATTTAGATACATACCCCC CCGCGCGCGCTGCCCCCCCACACACGCATAGGATTGAGAGGGAATCAAAG ATTCAAGTAGCAATCCGCGTTTTGTGAGAGCGGAAGAATAGCCCCAGCCA ACCAGGTTGCAGCACGGCGAGAGGACCGACGTAAGTGCTGAGGTCACGCG TCGGTGAGCGAAACGAGCACGGGCTCGAGACGCTGGTGTGACCGCGCTGC AGCCTGTGGGGTATTCTGTGGTTTTCTATCAATACCCCCCCGCGCGCGCT GCCCTCCGCGCTTTTTGGGGGCTCTATGCATAAAGAGTATCTATACCATC CCATCACAACACCACGTACTACCATCCCATTAAAACAACCAAACGACCGA ACCCTTAAAGGTGATCGACCACCTGATTCGGGCGAAGATCAAGGACGGCG GCAGCGAGCTGGACGACCGCAGCGAGCTCGGCAAGCACATCTGCAAGCGC ATGCCCCTGCACAACCAGGGGCGCCTCGACGCCCTCTACGGCGCCTGGGT GGTCTACTGGCGGGGGTCCACGGGCCAGCAGCAGCAGCAGCAGCAGGCCC AGCAGCAGGAGCAGCAACGGCGGCTGGAGCTCCGGATCCGGCGGCGGAAG GGGCAGGGCAAGACGAGGGTGGACAGCAAGGGTGAGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig17119:213..2701-

>mRNA_L-elsbetiae_contig17119.4757.1 ID=mRNA_L-elsbetiae_contig17119.4757.1|Name=mRNA_L-elsbetiae_contig17119.4757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig17119:213..2701- (Laminarionema elsbetiae ELsaHSoW15)
GTCCTGGGCGGAGCCCCTCCAGAGTTTTTCCTGGGCTGGACGAGCCCGGG
GACCCAGATCTGGTCCCGGATGCGCATGGCGGGGCTCGAGGTGGACAAGC
TCTACAGCTTCGACCGGCGTCGCGTGCTTCTCAAGATCAGGCTGCCGAGG
AGCAAGCTGGAGGAGGTCCTGGGCGGAGCCCCTCCAGAGTTTTTCCTGGG
CTGGACGAGCCCGGGGACCCAGATCTGGTCCCGGATGCGCATGGCGGGGC
TCGAGGTGGACAAGCTCTACAGCTTCGACCGGCGTCGCGTGCTTCTCAAG
ATCAGGCTGCCGAGGAGCAAGCTGGAGGAGGTGGCCGAAGTGATGAGGCT
GAAGGTCCGGAGGCGCGACGGCACCATCGGCCGCTTCAAGAAGGATCACC
GCAGCTCCTTCTCTGAGGGTGCGGGGGGCGACCTATTCCGGTCAGGGGAG
AGCCAGAAGGTGGCCGAAGTGATGAGGCTGAAGGTCCGGAGGCGCGACGG
CACCATCGGCCGCTTCAAGAAGGATCACCGCAGCTCCTTCTCTGAGGGTG
CGGGGGGCGACCTATTCCGGTCAGGGGAGAGCCAGAAGGTGATCGACCAC
CTGATTCGGGCGAAGATCAAGGACGGCGGCAGCGAGCTGGACGACCGCAG
CGAGCTCGGCAAGCACATCTGCAAGCGCATGCCCCTGCACAACCAGGGGC
GCCTCGACGCCCTCTACGGCGCCTGGGTGGTCTACTGGCGGGGGTCCACG
GGCCAGCAGCAGCAGCAGCAGCAGGCCCAGCAGCAGGAGCAGCAACGGCG
GCTGGAGCTCCGGATCCGGCGGCGGAAGGGGCAGGGCAAGACGAGGGTGG
ACAGCAAGGGTGAGTGAGTGATCGACCACCTGATTCGGGCGAAGATCAAG
GACGGCGGCAGCGAGCTGGACGACCGCAGCGAGCTCGGCAAGCACATCTG
CAAGCGCATGCCCCTGCACAACCAGGGGCGCCTCGACGCCCTCTACGGCG
CCTGGGTGGTCTACTGGCGGGGGTCCACGGGCCAGCAGCAGCAGCAGCAG
CAGGCCCAGCAGCAGGAGCAGCAACGGCGGCTGGAGCTCCGGATCCGGCG
GCGGAAGGGGCAGGGCAAGACGAGGGTGGACAGCAAGGGTGAGTGA
back to top