mRNA_L-elsbetiae_contig16726.4542.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A6H5L399_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L399_9PHAE) HSP 1 Score: 452 bits (1163), Expect = 2.150e-156 Identity = 228/249 (91.57%), Postives = 239/249 (95.98%), Query Frame = 1 Query: 1 RMTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSKENMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPMDAAWQALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGVTR 747 RMTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVK QMD+K+ +SPY+SITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVA+QSIY EGGL+GFFGKGGLK QWARDIPYAMVTLLVYETLQKAAARRKGP PG+ K AKANP+ENMVIGAIAGG+GSLVTNPMDMIKTRMMTSPELYAGPMDAAW+ALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRS+LGVTR Sbjct: 243 RMTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKNQMDAKQGISPYLSITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVAIQSIYHEGGLVGFFGKGGLKTQWARDIPYAMVTLLVYETLQKAAARRKGP---PGTKKKGAKANPIENMVIGAIAGGMGSLVTNPMDMIKTRMMTSPELYAGPMDAAWKALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSILGVTR 488
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A836CPL2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL2_9STRA) HSP 1 Score: 291 bits (744), Expect = 8.990e-96 Identity = 146/248 (58.87%), Postives = 184/248 (74.19%), Query Frame = 1 Query: 4 MTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSKENMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPMDAAWQALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGVTR 747 + AGR LL R GV LY GLGV+LVG+MP++G+YFG+YQ+ + ++D +SP SI +SAG+GNF+ASFFRVPYE+VKQRLQ G YP T AL+ +Y +GG+ FFG+GG+ Q ARD+PYAMVTL+VYE+LQ AARR+ G AK + LE M+IGAIAGGVG+L TNPMD++KTRMMT+P LYA DAA L +G +AF +GATPRLLHK+PAN FF AYE FR++LGV R Sbjct: 42 LNFFTAGRLLLKRNGVGALYSGLGVSLVGAMPSIGIYFGIYQYCRGKLDQSPRLSPLGSIALSAGIGNFVASFFRVPYEIVKQRLQAGVYPDTATALRIMYADGGVGAFFGRGGIATQLARDVPYAMVTLMVYESLQ-TAARRRAAARG------AAKPSHLETMLIGAIAGGVGTLATNPMDVVKTRMMTAPHLYASAWDAAVVTLRADGARAFARGATPRLLHKVPANGLFFAAYELFRTLLGVRR 282
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: W7TPC5_9STRA (Mitochondrial carrier n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC5_9STRA) HSP 1 Score: 256 bits (654), Expect = 3.000e-80 Identity = 144/257 (56.03%), Postives = 180/257 (70.04%), Query Frame = 1 Query: 4 MTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSKENMSP-----YISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYR-EGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAA-RRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPMDAAWQALSK----EGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGV 741 + +L+A +DL++R GV LY GLGVTLVGS+PAV VYFG+YQ VKK + + + P + + SAGVGN +AS FRVPYEVVKQRLQ G Y +T AL+++YR EGGLL FFG G+ Q RD+PYA+VTLL YE++++ A RR GPGE G K + A LE+ V+GA+AGGVGSLV+NPMD++KTR+MT P LY W A+SK EGP AF KG PRLLHK+PANA FF YE FR +L V Sbjct: 175 LGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKAL--LQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTA--LEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYP----TVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRV 423
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A7S1BCN2_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCN2_9STRA) HSP 1 Score: 223 bits (569), Expect = 6.470e-68 Identity = 125/251 (49.80%), Postives = 162/251 (64.54%), Query Frame = 1 Query: 46 GVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMD----------SK---------ENMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYA-GPMDAAWQALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLG 738 G+ +LY GLGVT+VGSMP+VG+YFG+Y + K+++ SK E S +SA +GN +ASF RVP+EVVKQ+LQ G +P T +AL+S+ EGGL FF GG+ Q ARDIPYA+ TL+ YE +++ R P E KE ++ NMV GA AGG+GS +TNPMD++KTR+ TSPE+Y G + A L +EGP AFLKG PRL+HKIPANA FF+ YEFFR VL Sbjct: 130 GIGQLYAGLGVTVVGSMPSVGLYFGVYSYCKQRIGPALLRKYDLYSKDIGFEGKHWEGTVVVFSQALSAAIGNTVASFSRVPFEVVKQKLQTGVFPNTFIALRSMINEGGLRSFFPVGGVSAQMARDIPYAIFTLVTYEYIKQKWVR---PNEL-----KEGASSAWRNMVTGATAGGIGSFLTNPMDVVKTRLQTSPEIYGRGVLQCAMTTLQEEGPAAFLKGMRPRLMHKIPANAVFFLWYEFFRRVLN 372
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A7S3V944_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V944_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.470e-66 Identity = 126/264 (47.73%), Postives = 172/264 (65.15%), Query Frame = 1 Query: 4 MTLLQAGRDLLAR-GGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQM------------DSKENMSPY----ISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAK-ANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPM-DAAWQALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLG 738 +TL QA +R GGV ELY GLGV+ +G+MP+VG+YFG+Y + K+++ D + +S +++ SA +GN IASF RVPYEVVKQ+LQ G+Y +T AL+ + GGL FF GG+ +Q RDIPYA+VTLL YE L+ + E G+EAK P ++M+ G +AGG+GS +TNPMD+IKTR+ + ELY+G + A + L + GP AFL+G+ PRL+HK+PANA FFV YEFFR VLG Sbjct: 115 LTLKQAANVATSRPGGVLELYAGLGVSAIGAMPSVGLYFGVYSYAKEKIGPFVQNRLGKDEDCVDGLSKAGVRSLTVATSAAIGNTIASFSRVPYEVVKQKLQTGEYSSTFGALKHMCANGGLRSFFPMGGVAIQMYRDIPYAIVTLLTYECLRDHWVNKNE--ELSLKDGQEAKKVAPWKDMIAGGVAGGMGSFMTNPMDVIKTRLQVNSELYSGNVWVCASRTLEEGGPSAFLRGSVPRLIHKVPANACFFVFYEFFRRVLG 376
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A7S2V6F4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6F4_9STRA) HSP 1 Score: 217 bits (552), Expect = 5.240e-66 Identity = 126/259 (48.65%), Postives = 160/259 (61.78%), Query Frame = 1 Query: 1 RMTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSKENMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLEN-------MVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGP---MDAAWQALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGVTR 747 ++ + AG ++ RGG LY GLGVT+VGS P+ VYFG Y ++ D + +SI SAG+GN +AS R PYE+VKQRLQ G YP T AL SI R+ G+ GFF GLK+Q ARDIPYAM+TLLVYETLQ ++K P LEN + IG IAGGVG+ +TNPMD++KTR+MT+ GP A + L++EG F +GA PRLLH+IPANA FF YE FR +LG+ R Sbjct: 93 QVGMFAAGSQVMQRGGFKALYSGLGVTVVGSAPSSAVYFGTYHCCRRWFDGL-GLQKSVSILASAGIGNTVASCLRAPYELVKQRLQYGMYPNTWTALTSIVRDEGVQGFFMSSGLKIQMARDIPYAMMTLLVYETLQDYV-KKKHP-------------RLLENGKKVWVDLAIGGIAGGVGTWMTNPMDVVKTRIMTAAVGPQGPPLVTTTANKILAEEGLLGFYRGAVPRLLHRIPANAVFFPFYECFRDLLGIKR 336
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: K0R3I4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3I4_THAOC) HSP 1 Score: 211 bits (536), Expect = 3.700e-64 Identity = 120/269 (44.61%), Postives = 169/269 (62.83%), Query Frame = 1 Query: 4 MTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDS----------KENMSPY--------ISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSP----ELYAGPMDAAWQALSKEG-PQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGV 741 + L +AGR ++ RGGV ELY GL V+ +GSMP+VG+YFG+Y + K+ + S ++ P ISI SA +GN +ASF RVPYEVVKQ LQ G+Y +T+ A+QS++ E GL FF GG+ +Q ARDIPYA+ TLL YE L++ A ++ ++ +MV G +GG+GS +TNPMD++KTR+ T P +G + A A+ +EG P AFL+G+ PRLLHK+PAN+ FF+ YEFF+ +L V Sbjct: 31 LGLFEAGRIVVGRGGVGELYAGLAVSALGSMPSVGLYFGVYSYCKRTVGSAFTRCLGSQRQDGKRPLCSDESLRTISIACSAAIGNTVASFSRVPYEVVKQNLQTGKYSSTVTAMQSMWNESGLRAFFPLGGISVQMARDIPYAIFTLLSYEFLREKWALKRSQ--------QDPNGRWWRDMVAGGASGGLGSYLTNPMDVVKTRIQTPPVGDSTACSGSIMACANAVWEEGGPSAFLRGSVPRLLHKVPANSCFFLFYEFFKRLLRV 291
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A7S3L8P2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8P2_9STRA) HSP 1 Score: 204 bits (520), Expect = 9.270e-61 Identity = 115/249 (46.18%), Postives = 161/249 (64.66%), Query Frame = 1 Query: 4 MTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSKE--NMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPMDAAWQALSKEG-PQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGV 741 ++++ A R++ GG + Y GLGVT++G+MP V +YFG+YQ+ KK++ + +P +++ VSA +GN +ASF RVPYEV+KQ+LQ+G Y TT AL + + + F KGG+ +Q RD+PYA+ TLLVYE LQ A KE + ++G +AGG GS VTNPMD+IKTR+ T+ +LY G + +A+ EG AFL+GA PRL HKIPANAFFF+ YE FR +LGV Sbjct: 129 LSVVGACREIWNLGGFGKFYAGLGVTVIGAMPGVSLYFGVYQYCKKKLRATPWGERNPLVAVAVSAAIGNSVASFSRVPYEVLKQKLQMGVYDTTWEALVAAAKNPVAM-LFPKGGVAIQMIRDVPYAIATLLVYEMLQGAFT----------GVAKE------RDFLLGGLAGGFGSWVTNPMDVIKTRLQTNSDLYEGSVVVCAKAVWGEGGAAAFLRGAVPRLAHKIPANAFFFLFYETFRRILGV 360
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A7S1UWT0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWT0_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.410e-60 Identity = 119/260 (45.77%), Postives = 160/260 (61.54%), Query Frame = 1 Query: 4 MTLLQAGRDLLAR-GGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSK----------ENMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEA--KANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPMDAAWQALSKEG-PQAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGV 741 +TL QA +++R GG ELY G+GV +VGSMP+VG+YFG+Y + K+ + + + ++IT SA +GN IASF RVPYEV+KQ+LQ G Y T A+ + + G+ GFF GG+ +Q RDIPYAM TLL YE L+ P KE ++ L + GA+AGGVGS VTNPMD+IKTR+ T +LY G + + EG P AFL+G+ PRLLHK+PAN FF+ YE FR++L V Sbjct: 175 LTLKQAMDLVVSRPGGFFELYAGVGVAVVGSMPSVGLYFGVYSYCKRLIQPRLVPDDPNNKYRGLLMMLTITTSAAIGNTIASFSRVPYEVMKQKLQTGMYTNTWQAMMELAKHDGIRGFFPMGGIGIQMLRDIPYAMTTLLCYELLKVQF-----------QPWKERFKESTSLVDAFTGAVAGGVGSYVTNPMDVIKTRLQTESQLYGGSIMKCFHDTWMEGGPSAFLRGSVPRLLHKVPANGIFFLFYELFRTLLRV 423
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Match: A0A1Z5K4E5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4E5_FISSO) HSP 1 Score: 201 bits (512), Expect = 3.520e-60 Identity = 109/251 (43.43%), Postives = 160/251 (63.75%), Query Frame = 1 Query: 4 MTLLQAGRDLLAR-GGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSKE--NMSPYISITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVALQSIYREGGLLGF-FGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPGEGPGSPGKEAKANPLENMVIGAIAGGVGSLVTNPMDMIKTRMMTSPELYAGPMDAAWQALSKEGP-QAFLKGATPRLLHKIPANAFFFVAYEFFRSVLGV 741 +T+ +A R++++R GG Y GLGVT++G+MP+V +YFG+Y + KK + + P S+ +SA +GN +ASF RVPYEV+KQ+LQ G Y +T AL+ I + F KGG+ +Q RD+PYA++TL++YETLQ + +++N + + +G AGG GS TNP D+IKTR+ T+ ELY G + + +EG AFL+G+ PRL+HK+PANAFFF+ YE FR +LGV Sbjct: 75 LTIWEACREIMSRPGGFWNFYAGLGVTVIGAMPSVALYFGVYSYCKKTLLNSHWGKKHPTASVALSAAIGNSVASFSRVPYEVLKQQLQTGVYTSTWQALKEISSSKEYMSLLFPKGGIAIQMLRDVPYAVITLMLYETLQNTFHK--------------SRSNKVIDFCVGGAAGGFGSWATNPTDVIKTRLQTNSELYGGSVRTCTAEIWREGGIMAFLRGSVPRLVHKVPANAFFFLFYEGFRQLLGV 311 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16726.4542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16726.4542.1 >prot_L-elsbetiae_contig16726.4542.1 ID=prot_L-elsbetiae_contig16726.4542.1|Name=mRNA_L-elsbetiae_contig16726.4542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp MTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKKQMDSback to top mRNA from alignment at L-elsbetiae_contig16726:157..2756+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16726.4542.1 ID=mRNA_L-elsbetiae_contig16726.4542.1|Name=mRNA_L-elsbetiae_contig16726.4542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2600bp|location=Sequence derived from alignment at L-elsbetiae_contig16726:157..2756+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16726:157..2756+ >mRNA_L-elsbetiae_contig16726.4542.1 ID=mRNA_L-elsbetiae_contig16726.4542.1|Name=mRNA_L-elsbetiae_contig16726.4542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig16726:157..2756+ (Laminarionema elsbetiae ELsaHSoW15)back to top |