prot_L-elsbetiae_contig1670.4530.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1670.4530.1
Unique Name	prot_L-elsbetiae_contig1670.4530.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	104

Homology

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BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A0R6M4T4_UNDPI (50S ribosomal protein L21, chloroplastic n=25 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4T4_UNDPI)

HSP 1 Score: 171 bits (432), Expect = 2.410e-53
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYAIIEASG+QFWVEPKKFIE NRL +K GS ILIRRVLFVK+  N LIGQP+LNNV ++G+++KHFLGPKILVFKMKPKKKY+KK GHRQKLTRLLINKI
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRVLFVKQKKNTLIGQPYLNNVVVKGVVSKHFLGPKILVFKMKPKKKYRKKIGHRQKLTRLLINKI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8F0JZ48_9PHAE (Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ48_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 9.430e-51
Identity = 80/102 (78.43%), Postives = 91/102 (89.22%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYAIIEASG+QFWVEPKKFIE NRL +K GS +LIRRVLFVKK  N LIG+P+L  + ++GII+KHFLGPKI+VFKMKPKKKY+KK GHRQKLTRLLINKI
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTVLIRRVLFVKKEANTLIGRPYLEGIVLKGIISKHFLGPKIIVFKMKPKKKYRKKIGHRQKLTRLLINKI 102

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BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8F0F7S8_9PHAE (Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S8_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 5.460e-50
Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYAIIEASG+QFWVEPKKFIE N L IK GS ILIRRVLF K   N  IGQP+LN+V ++GII+KHFLGPK+LVFKMKPKKKY+KK GHRQKLTRLLIN+I
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNXLIIKIGSTILIRRVLFFKNETNTFIGQPYLNDVVVKGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A2R4QQ35_9PHAE (50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ35_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.210e-49
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYAIIEASG+QFWVEPKKFIE NRL +K GS I+I+RVLFVKK  +  IGQP+L N+ + GII+KHFLGPK+LVFKMKPKKKY+KK GHRQKLTRLLIN+I
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKADTFIGQPYLKNILLTGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A141BSP2_9PHAE (50S ribosomal protein L21, chloroplastic n=14 Tax=Sargassum TaxID=3015 RepID=A0A141BSP2_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.940e-48
Identity = 77/102 (75.49%), Postives = 89/102 (87.25%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYAIIEASG+QFWVEP KFIELNRL ++ GS ILI+R+LFVKK  N  IGQP+L N+ ++GII+KHFLG KILVFKMKPKKKY+KK GHRQKLTRLLI+ I
Sbjct:    1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSTILIKRILFVKKKTNTFIGQPYLTNIVLKGIISKHFLGSKILVFKMKPKKKYRKKMGHRQKLTRLLISSI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A1I9LVJ3_9PHAE (50S ribosomal protein L21, chloroplastic n=10 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ3_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.500e-47
Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYAIIEASG+QFWVEPKKFIE NRL +K GS ILIRR+LF K      IGQP+L N+ ++G I+KHFLGPKILVFKMKPKKKY+KK GHRQK+TRLLI+KI
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRILFAKNKTTTHIGQPYLKNILVKGKISKHFLGPKILVFKMKPKKKYRKKIGHRQKMTRLLIHKI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8F0JYD6_9PHAE (Ribosomal protein L21 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYD6_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.010e-45
Identity = 73/102 (71.57%), Postives = 87/102 (85.29%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            MEYA+IEASG+QFWVEPKKFIE NRL I  GS ++++R+LF+ K   I IGQP+L N  I+GII+KHFLGPKILVFKMKPKKKY++K GHRQKLTRL IN+I
Sbjct:    1 MEYAVIEASGRQFWVEPKKFIEFNRLLINIGSTLIMQRILFMNKTGAINIGQPYLPNTLIKGIISKHFLGPKILVFKMKPKKKYRRKIGHRQKLTRLFINQI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8E5XRL0_9PHAE (50S ribosomal protein L21, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRL0_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.530e-45
Identity = 69/102 (67.65%), Postives = 90/102 (88.24%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            M+YAIIEASG+QFWVEP+KF+ELNRL +  G+ ILI+RVLF K      IGQP++N+++I+G+++KHFLGPK+LVFKMKPKKKY+K+ GHRQKLTRLLI++I
Sbjct:    1 MKYAIIEASGRQFWVEPEKFVELNRLPVNIGTKILIKRVLFAKTGEKTRIGQPYINHIEIKGVVSKHFLGPKLLVFKMKPKKKYRKRIGHRQKLTRLLISQI 102

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A1L2F1Q6_9PHAE (Ribosomal protein L21 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q6_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 4.380e-45
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLIN 100
            MEYAIIEASG+QFWVEP KFIELNRL ++ GS ILI+R+LFVKK  N  IGQP+L N+ ++GII+KHFLGPKI+VFKMK KK   KK GHRQKLTRLLIN
Sbjct:    1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSIILIKRILFVKKKTNTFIGQPYLTNIILKGIISKHFLGPKIIVFKMKTKKNTVKKIGHRQKLTRLLIN 100

[Close]

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A7S6UA35_9STRA (50S ribosomal protein L21, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA35_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.460e-44
Identity = 69/102 (67.65%), Postives = 87/102 (85.29%), Query Frame = 0

Query:    1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 102
            M+YAIIEASG+Q+W+EPK FI +NR+ IKTGS + IRR+LFVKK  +I IGQP+LN  KI+  + KHFLGPK++VFKMKPKKKYK+K GHRQ+L+RL+IN I
Sbjct:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTI 102

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0R6M4T4_UNDPI	2.410e-53	81.37	50S ribosomal protein L21, chloroplastic n=25 Tax=...	[more]
A0A8F0JZ48_9PHAE	9.430e-51	78.43	Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxI...	[more]
A0A8F0F7S8_9PHAE	5.460e-50	78.43	Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2...	[more]
A0A2R4QQ35_9PHAE	1.210e-49	76.47	50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3...	[more]
A0A141BSP2_9PHAE	1.940e-48	75.49	50S ribosomal protein L21, chloroplastic n=14 Tax=...	[more]
A0A1I9LVJ3_9PHAE	1.500e-47	74.51	50S ribosomal protein L21, chloroplastic n=10 Tax=...	[more]
A0A8F0JYD6_9PHAE	1.010e-45	71.57	Ribosomal protein L21 n=1 Tax=Protohalopteris sp. ...	[more]
A0A8E5XRL0_9PHAE	1.530e-45	67.65	50S ribosomal protein L21, chloroplastic n=1 Tax=I...	[more]
A0A1L2F1Q6_9PHAE	4.380e-45	74.00	Ribosomal protein L21 n=1 Tax=Coccophora langsdorf...	[more]
A0A7S6UA35_9STRA	2.460e-44	67.65	50S ribosomal protein L21, chloroplastic n=1 Tax=S...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028909	Ribosomal protein L21-like	PFAM	PF00829	Ribosomal_L21p	coord: 3..102 e-value: 4.5E-32 score: 110.3
IPR028909	Ribosomal protein L21-like	PANTHER	PTHR21349	50S RIBOSOMAL PROTEIN L21	coord: 2..102
IPR001787	Ribosomal protein L21	TIGRFAM	TIGR00061	TIGR00061	coord: 3..102 e-value: 1.7E-29 score: 100.2
IPR001787	Ribosomal protein L21	HAMAP	MF_01363	Ribosomal_L21	coord: 2..103 score: 19.952
None	No IPR available	PANTHER	PTHR21349:SF3	50S RIBOSOMAL PROTEIN L21	coord: 2..102
IPR018258	Ribosomal protein L21, conserved site	PROSITE	PS01169	RIBOSOMAL_L21	coord: 73..95
IPR036164	L21-like superfamily	SUPERFAMILY	141091	L21p-like	coord: 3..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1670	contig	L-elsbetiae_contig1670:23679..23990 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1670.4530.1	mRNA_L-elsbetiae_contig1670.4530.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1670 23679..23990 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1670.4530.1 ID=prot_L-elsbetiae_contig1670.4530.1|Name=mRNA_L-elsbetiae_contig1670.4530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp
MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILI
GQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLIN
KII*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028909	L21p-like
IPR001787	Ribosomal_L21
IPR018258	Ribosomal_L21_CS
IPR036164	L21-like_sf