mRNA_L-elsbetiae_contig1670.4530.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A0R6M4T4_UNDPI (50S ribosomal protein L21, chloroplastic n=25 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4T4_UNDPI) HSP 1 Score: 171 bits (432), Expect = 2.410e-53 Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYAIIEASG+QFWVEPKKFIE NRL +K GS ILIRRVLFVK+ N LIGQP+LNNV ++G+++KHFLGPKILVFKMKPKKKY+KK GHRQKLTRLLINKI Sbjct: 1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRVLFVKQKKNTLIGQPYLNNVVVKGVVSKHFLGPKILVFKMKPKKKYRKKIGHRQKLTRLLINKI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8F0JZ48_9PHAE (Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ48_9PHAE) HSP 1 Score: 164 bits (415), Expect = 9.430e-51 Identity = 80/102 (78.43%), Postives = 91/102 (89.22%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYAIIEASG+QFWVEPKKFIE NRL +K GS +LIRRVLFVKK N LIG+P+L + ++GII+KHFLGPKI+VFKMKPKKKY+KK GHRQKLTRLLINKI Sbjct: 1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTVLIRRVLFVKKEANTLIGRPYLEGIVLKGIISKHFLGPKIIVFKMKPKKKYRKKIGHRQKLTRLLINKI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8F0F7S8_9PHAE (Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S8_9PHAE) HSP 1 Score: 162 bits (410), Expect = 5.460e-50 Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYAIIEASG+QFWVEPKKFIE N L IK GS ILIRRVLF K N IGQP+LN+V ++GII+KHFLGPK+LVFKMKPKKKY+KK GHRQKLTRLLIN+I Sbjct: 1 MEYAIIEASGRQFWVEPKKFIEFNXLIIKIGSTILIRRVLFFKNETNTFIGQPYLNDVVVKGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A2R4QQ35_9PHAE (50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ35_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.210e-49 Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYAIIEASG+QFWVEPKKFIE NRL +K GS I+I+RVLFVKK + IGQP+L N+ + GII+KHFLGPK+LVFKMKPKKKY+KK GHRQKLTRLLIN+I Sbjct: 1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKADTFIGQPYLKNILLTGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A141BSP2_9PHAE (50S ribosomal protein L21, chloroplastic n=14 Tax=Sargassum TaxID=3015 RepID=A0A141BSP2_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.940e-48 Identity = 77/102 (75.49%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYAIIEASG+QFWVEP KFIELNRL ++ GS ILI+R+LFVKK N IGQP+L N+ ++GII+KHFLG KILVFKMKPKKKY+KK GHRQKLTRLLI+ I Sbjct: 1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSTILIKRILFVKKKTNTFIGQPYLTNIVLKGIISKHFLGSKILVFKMKPKKKYRKKMGHRQKLTRLLISSI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A1I9LVJ3_9PHAE (50S ribosomal protein L21, chloroplastic n=10 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ3_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.500e-47 Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYAIIEASG+QFWVEPKKFIE NRL +K GS ILIRR+LF K IGQP+L N+ ++G I+KHFLGPKILVFKMKPKKKY+KK GHRQK+TRLLI+KI Sbjct: 1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRILFAKNKTTTHIGQPYLKNILVKGKISKHFLGPKILVFKMKPKKKYRKKIGHRQKMTRLLIHKI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8F0JYD6_9PHAE (Ribosomal protein L21 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYD6_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.010e-45 Identity = 73/102 (71.57%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 MEYA+IEASG+QFWVEPKKFIE NRL I GS ++++R+LF+ K I IGQP+L N I+GII+KHFLGPKILVFKMKPKKKY++K GHRQKLTRL IN+I Sbjct: 1 MEYAVIEASGRQFWVEPKKFIEFNRLLINIGSTLIMQRILFMNKTGAINIGQPYLPNTLIKGIISKHFLGPKILVFKMKPKKKYRRKIGHRQKLTRLFINQI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A8E5XRL0_9PHAE (50S ribosomal protein L21, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRL0_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.530e-45 Identity = 69/102 (67.65%), Postives = 90/102 (88.24%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 M+YAIIEASG+QFWVEP+KF+ELNRL + G+ ILI+RVLF K IGQP++N+++I+G+++KHFLGPK+LVFKMKPKKKY+K+ GHRQKLTRLLI++I Sbjct: 1 MKYAIIEASGRQFWVEPEKFVELNRLPVNIGTKILIKRVLFAKTGEKTRIGQPYINHIEIKGVVSKHFLGPKLLVFKMKPKKKYRKRIGHRQKLTRLLISQI 102
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A1L2F1Q6_9PHAE (Ribosomal protein L21 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q6_9PHAE) HSP 1 Score: 150 bits (378), Expect = 4.380e-45 Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLIN 300 MEYAIIEASG+QFWVEP KFIELNRL ++ GS ILI+R+LFVKK N IGQP+L N+ ++GII+KHFLGPKI+VFKMK KK KK GHRQKLTRLLIN Sbjct: 1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSIILIKRILFVKKKTNTFIGQPYLTNIILKGIISKHFLGPKIIVFKMKTKKNTVKKIGHRQKLTRLLIN 100
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Match: A0A7S6UA35_9STRA (50S ribosomal protein L21, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA35_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.460e-44 Identity = 69/102 (67.65%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 1 MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIGQPFLNNVKIEGIITKHFLGPKILVFKMKPKKKYKKKFGHRQKLTRLLINKI 306 M+YAIIEASG+Q+W+EPK FI +NR+ IKTGS + IRR+LFVKK +I IGQP+LN KI+ + KHFLGPK++VFKMKPKKKYK+K GHRQ+L+RL+IN I Sbjct: 1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTI 102 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1670.4530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1670.4530.1 >prot_L-elsbetiae_contig1670.4530.1 ID=prot_L-elsbetiae_contig1670.4530.1|Name=mRNA_L-elsbetiae_contig1670.4530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp MEYAIIEASGKQFWVEPKKFIELNRLTIKTGSNILIRRVLFVKKNNNILIback to top mRNA from alignment at L-elsbetiae_contig1670:23679..23990- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1670.4530.1 ID=mRNA_L-elsbetiae_contig1670.4530.1|Name=mRNA_L-elsbetiae_contig1670.4530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=312bp|location=Sequence derived from alignment at L-elsbetiae_contig1670:23679..23990- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1670:23679..23990- >mRNA_L-elsbetiae_contig1670.4530.1 ID=mRNA_L-elsbetiae_contig1670.4530.1|Name=mRNA_L-elsbetiae_contig1670.4530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig1670:23679..23990- (Laminarionema elsbetiae ELsaHSoW15)back to top |