prot_L-elsbetiae_contig1670.4526.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1670.4526.1
Unique Nameprot_L-elsbetiae_contig1670.4526.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length431
Homology
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: M2XXY3_GALSU (DNA-directed RNA polymerase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXY3_GALSU)

HSP 1 Score: 365 bits (938), Expect = 1.080e-118
Identity = 197/427 (46.14%), Postives = 292/427 (68.38%), Query Frame = 0
Query:    7 KKIKRTILKGIIHIQSTYNNTIVTITDLNGNTLSWASAGTVDFKGSRKSTPFAAQKAAEQATIKAKELYGLKRVNVIIKGPGSGREPAIRGVHLNKIKILSIKDVTQIAYNGCRPPKRRRY---CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTNYFELII 430
            KK K+ I  GI HI+ST+NNTIV ITD+NGNT++WASAG V FKG++K+TPFAAQ  AE+A  +A E  G+++  + I GPGSGRE AIR +    +KI +IKD+T I +NGCRPPKRRR    C+ES  + PTN +G+F+  PL+ GQG ++G  LRR ++A+L G  I  +RI+G+N+EF+ + G+REDVL+I+LNLK+IIFKSDL E  ++RL++ GP IVTA  L+LP  +E+++P  +I TI +N+  E+E+K++ GKGY+L  +   +   + + +D+ +MP+ K+ F  +E         EKL L+I TNGSITP+E+I +A+ + +  L  ++ I   +  +  K++SQ  KK   + +PIE L LS R  N LK+++I  + +L  ++ +DLLEIKN G KS +E+   L NY  + +
Sbjct:  111 KKQKKNIYNGITHIKSTFNNTIVNITDINGNTIAWASAGQVGFKGAKKATPFAAQTTAEKAGKQALE-NGMRQTEIRINGPGSGRETAIRALQALGLKITTIKDITPIPHNGCRPPKRRRLQIECLESFNQNPTNQYGKFIIYPLNKGQGITLGNALRRIMLAELEGLAISSVRISGVNHEFTTVEGVREDVLDILLNLKQIIFKSDLDEPQFIRLKVSGPSIVTASDLELPTRLELVDPRQYIATIDNNTNLEMEMKIEKGKGYDLVNKKTGENLTESLKVDAVYMPIRKVMFHVKEQYNGESLLFEKLILEIITNGSITPKEAIIKASDIFIKMLEPLKEI-AIESEEENKDNSQEEKKL--HQVPIEELHLSVRAYNCLKRAQIFSVADLLDYSEEDLLEIKNFGYKSAEEVMQALQNYLGITL 533          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A8E5XRJ1_9PHAE (DNA-directed RNA polymerase subunit alpha n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ1_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 7.050e-88
Identity = 143/306 (46.73%), Postives = 211/306 (68.95%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEI--EPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIK---KDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTNYFEL 428
            CIE + KTPT+ FGRFVF+PLD+G G +IG +LRR L++ L G RI  +RIA +NNEF+ I G+RED LEI+LNLKEIIF+S    + + RL++QGP +VTA+ L LPP +E++NP  H+LTISD+S+ E+E++L+ GK Y LAE+ K +   D IPIDSNFMPV K+N++ + +  +  ++ KKE++F D+WTNG++TP+ESI +AT + + WL  IQ +      +I + +    +   K      P+E L LS R    LKK+ IN+++EL ++   DL +I+N G KS+DEI  K++  + +
Sbjct:    8 CIEEDAKTPTDSFGRFVFKPLDVGDGVTIGNLLRRVLLSSLSGLRITAVRIANVNNEFASIEGVREDTLEILLNLKEIIFRSKNIGSGWGRLKVQGPAVVTANSLDLPPEVELVNPFAHLLTISDDSIIELEVRLEWGKSYVLAEDQKIEGPSDLIPIDSNFMPVRKMNYYVKPLFSKDNVDEKKEQVFFDVWTNGTVTPKESIAQATDISLDWLTAIQKMLSSLSKEIQEENKMVPEFPPKQGKAKTPLEELNLSTRAYRSLKKADINFLEELVQYPIGDLKKIRNFGRKSLDEIMEKVSTLYNI 313          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A222AIC1_9CRYP (DNA-directed RNA polymerase subunit alpha n=2 Tax=Chroomonas TaxID=3028 RepID=A0A222AIC1_9CRYP)

HSP 1 Score: 269 bits (687), Expect = 5.880e-84
Identity = 139/292 (47.60%), Postives = 205/292 (70.21%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKD-KNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEI 418
            CI+S +  P +H+ +F+ EPLD GQG ++G  LRR L+ADL G  I+ +RIAG+N+EFS IPGIREDVLEI+LNLKEIIFKSD  ETT  R+R+QGP IVTA+  +LPP + +++P  ++ TI  N+V E+E +++ GKGY L E+   +  LD++ IDS FMPV K+N+  E+I       +++L L++WTNGSI+P+E+I +++ +L     N+ N  P + I      SQ++++D K N I IE LQLS R  N LK+++I+ + +L  ++++DLLEIKN G KS +E+
Sbjct:    8 CIDSRIDGPRDHYDKFILEPLDQGQGITVGNSLRRVLLADLQGTAIVSVRIAGVNHEFSTIPGIREDVLEILLNLKEIIFKSDSNETTIGRVRVQGPAIVTANDFELPPELTLVDPKQYVATICGNNVLEMEFRIEKGKGYRLVEKGIDETSLDFLQIDSIFMPVKKVNYIVEDIRYKQNILQDRLILEVWTNGSISPKEAISQSSNILT----NLFN--PLKNINFKSEESQDLQEDSKINQILIEELQLSVRAYNCLKRAQIHSVADLLDYSQEDLLEIKNFGQKSAEEV 293          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A7S6UA03_9STRA (DNA-directed RNA polymerase subunit alpha n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA03_9STRA)

HSP 1 Score: 264 bits (674), Expect = 5.430e-82
Identity = 135/276 (48.91%), Postives = 190/276 (68.84%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNI-------KPYQQIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQEL 396
            C+E N++TPT +FGRFVF+PLD G+G +IG MLRR L+  L G  IIG+RIAG+N+EFS IPG+RED+LE+ILNLK++IFK++  ET + RL++QGP IVTA  L+LP   EI+NP++++ TISDNS+ E+EIK+  GKGY LA++ K +  +D++ IDS FMP++K N+F E     +   KE+L LDIWTNGSITP+E++ +A  +L+ WL  I+NI       K   + Q               +I +E L+LS R  N LK+  IN + +L
Sbjct:    8 CVELNIETPTEYFGRFVFKPLDFGEGITIGNMLRRVLLNGLPGLSIIGVRIAGVNHEFSAIPGVREDILELILNLKQVIFKTESRETCFGRLKVQGPAIVTASSLQLPQYFEIVNPYSYLATISDNSILELEIKIDWGKGYTLAKDQKIEGPVDFLAIDSIFMPITKTNYFVEPFSSEIIVTKEQLILDIWTNGSITPQEALSQAANILIQWLEPIKNIDTNLKESKKKIETQXXXXXXXXXXXXXTKDILLENLKLSSRSYNALKRENINSLNDL 283          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A812TYL6_9DINO (RpoA protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812TYL6_9DINO)

HSP 1 Score: 280 bits (715), Expect = 5.070e-80
Identity = 163/455 (35.82%), Postives = 264/455 (58.02%), Query Frame = 0
Query:    5 KKKKIKRTILKGIIHIQSTYNNTIVTITDLNGNTLSWASAGTVDFKGSRKSTPFAAQKAAEQATIKAKELYGLKRVNVIIKGPGSGREPAIRGVHLNKIKILSIKDVTQIAYNGCRPPKRRRYC----------------------------IESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEE---SKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKD----KNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTN 424
            K+KKI++ ++KGI HIQ+++NNTIVTITD  G TL W SAGT+ FKGSRKSTPFAA +A E    KA+++ G+  + V ++G G+GRE AI G+    +++ +++D T + +NGCRP KRRR                              +  + K  T  FGRF+ EP + G GT++G  LRR L++ L G  I  ++I G ++EF+ IPG+ EDV EIILN+K+++ K +  E   + L   GP  VTAD ++    I ILN  + + T++D   FE+E  +  G+GY  A E   ++ ++ +  IP+D+N+ PV ++ +  E+     ++  +KL +DIWT+G+ TPE+++  A  +L   L            ++ + ++     D    +  N+PI  L+LS R  N L+ ++I+ + +L   +  DLL++++ G  S+ E++ KLT+
Sbjct:    4 KQKKIRKNVVKGIAHIQASFNNTIVTITDTAGETLCWDSAGTIGFKGSRKSTPFAATRAGESCGAKARKM-GMIEIEVRLRGSGAGRESAINGLVSKGLRVSALEDHTPVPHNGCRPRKRRRKAPAATGRAADSAEQTHGSSSWRGLELPSKVNVDPKFATETFGRFIVEPFERGFGTTVGNSLRRVLLSSLEGAAITNVKIKGADHEFTTIPGVMEDVTEIILNVKDLVVKLEGDEPKTMTLAAGGPGEVTADLIEADTAITILNKDHVLATLTDEITFEMEFTVAKGRGYVPASEQYNNQEEQEIGVIPVDANYSPVQRVRYKVEDTRVGQKTNYDKLIMDIWTDGTTTPEDALVEAAKILRKHLNAFVQFFEVGVERVSEAAAAAASVDDELIRKLNMPITELELSVRASNCLESAQIDTVAQLVTKSESDLLKVRSFGKTSLREVKRKLTD 457          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: UPI001FCD5B8A (RNA polymerase alpha subunit n=1 Tax=Glaucosphaera vacuolata TaxID=38265 RepID=UPI001FCD5B8A)

HSP 1 Score: 256 bits (655), Expect = 2.180e-79
Identity = 132/293 (45.05%), Postives = 197/293 (67.24%), Query Frame = 0
Query:  134 KTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTNYF 426
            K P NH+GRF+ EPL  GQG +IG  LRR L+ DL G  I+ IRI GI++EF+ IPG+REDVLEI+LNLK+IIFKS++TE    R+++QGP +VTA   +LP  I I++P  +I TI +N++FE+E +++ G+ Y + E+   + F D++PID+ F PV + N+  EEI      + +KL ++IWTNGS +PEE++ +A+ +L      ++N+K  Q+++ +K           N I IE LQLS R  N LK++KI++I +L ++  +DLLEIKN G KS DE+   L++ F
Sbjct:   14 KKPRNHYGRFLIEPLKQGQGITIGNALRRTLLTDLTGTAIVAIRIVGIDHEFTCIPGVREDVLEILLNLKQIIFKSNITEPQIGRVKVQGPAVVTAGLFELPSEIGIVDPSQYIATICNNTIFEMEFRIEQGQAYRIVEKGIDNTFADFLPIDAIFAPVMQANYEVEEI------RVKKLMIEIWTNGSCSPEEALSKASNILSQIFYTLKNLKYVQKVKYVKI----------NQISIEELQLSVRAYNCLKRAKIHFISDLLEYNYEDLLEIKNFGQKSADEVMAALSDRF 290          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A4D6WZP7_9FLOR (DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphondylothamnion multifidum TaxID=193186 RepID=A0A4D6WZP7_9FLOR)

HSP 1 Score: 255 bits (652), Expect = 8.970e-79
Identity = 134/292 (45.89%), Postives = 193/292 (66.10%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKDKN-NNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEI 418
            CIESN K     +G FV EPL  GQG ++G  LRR +++DL G  I+ +RIAGIN+EFS I G+REDVLEI+LNLKE+I KS  +E    R+RIQGP ++T+    LP  +EI++P  +I T+ +N++FE+E +++ GKGY L E+   ++ +D++ ID+ FMP  K N+  EE +    + +EKLFL+IWTNGS++P+E+I +   VL +         P   I     S+  + KDK  N IPIE LQLS R  N LK+++IN I +L  +++D+LLEIKN G KS +E+
Sbjct:    8 CIESNTKGAREQYGHFVLEPLKRGQGITVGNSLRRTILSDLEGTAIVAVRIAGINHEFSTITGVREDVLEILLNLKEVILKSYSSEPQIGRIRIQGPAVITSGLFDLPTEVEIIDPKQYIATVCNNTIFEMEFRIEKGKGYRLIEKGIDNKSIDFLQIDAVFMPAKKFNYTIEEKKINTNTIEEKLFLEIWTNGSLSPQEAISQGADVLTNLF------HPLTNINFKTKSTNEVNKDKQINQIPIEELQLSVRAYNCLKRAQINSIADLLHYSQDELLEIKNFGQKSAEEV 293          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A1C9CD00_9RHOD (DNA-directed RNA polymerase subunit alpha n=1 Tax=Bangiopsis subsimplex TaxID=139980 RepID=A0A1C9CD00_9RHOD)

HSP 1 Score: 255 bits (652), Expect = 1.050e-78
Identity = 129/299 (43.14%), Postives = 196/299 (65.55%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTNYF 426
            C+ES +  P +H+G+F   PL   Q  +IG  LRR L++DL G  I  +++AG+N+EFS I G+REDVLEI+LNLK IIF++ +  +   R+R+QGP IVTA  L+LPPG+E+++P  +I TI +NS+FE+E +L++  GY +      ++ LD+I IDS FMPV K+NFF +E +     +KE L L++WTNGS+TP+E++ ++  +L     +++N+    + + I  +  N  +     IPIE LQLS R  N LK+++IN I +L  ++ ++LLEIKN G KS DE+   L   F
Sbjct:    8 CLESRIDKPRDHYGQFAISPLRSSQAITIGNALRRTLLSDLEGTAIAAVKLAGVNHEFSTISGVREDVLEILLNLKSIIFRTQIQNSGLGRVRVQGPGIVTAGLLELPPGVELVDPRQYIATICNNSIFELEFRLETNTGYKIVNRGVDEKSLDFIQIDSKFMPVKKVNFFMDETQSNNLFEKETLLLEVWTNGSLTPQEAVSQSASLLTKLFNSLKNLDFKCETEDISTNEHNTAQ-----IPIEELQLSVRAYNCLKRAQINSISDLLNYSNEELLEIKNFGQKSADEVIDALYKRF 301          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A0B5W2M2_9FLOR (DNA-directed RNA polymerase subunit alpha n=4 Tax=Vertebrata TaxID=1261581 RepID=A0A0B5W2M2_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 1.190e-78
Identity = 135/297 (45.45%), Postives = 193/297 (64.98%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTN 424
            CIES  K    H+G FV EPL  GQG ++G  LRR ++++L G  I+ +RIAGIN+EFS I G+REDVLEIILNLKE+I KS  TE    R++IQGP ++T+    +PP IEI++P  +I TI  N++FE+E K++ G GY L E+   D+ +D++ ID+ FMP  K N+  EE +      KEKLFL++WTNGSI+P+E+I +   +L      + NI    +  I  N+ + I +     I IE LQLS R  N LK+++IN I +L  +++++LLEIKN G KS +E+   L+N
Sbjct:    8 CIESKTKGAREHYGHFVLEPLQQGQGITVGNSLRRTILSELKGAAIVSVRIAGINHEFSTITGVREDVLEIILNLKEVILKSYSTEPQIGRIKIQGPAVITSGLFDIPPEIEIIDPKQYIATICSNTIFEMEFKIEQGHGYKLVEKGIDDKSIDFLQIDAIFMPAKKFNYRVEEKKINASDIKEKLFLEVWTNGSISPQEAISQGANILTKLFHPLTNISFKSKEDISGNTEKQISQ-----ILIEELQLSVRAYNCLKRAQINSIGDLLDYSQEELLEIKNFGQKSAEEVIEALSN 299          
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Match: A0A1Z1MUL0_9FLOR (DNA-directed RNA polymerase subunit alpha n=1 Tax=Tolypiocladia glomerulata TaxID=860646 RepID=A0A1Z1MUL0_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 1.190e-78
Identity = 134/297 (45.12%), Postives = 193/297 (64.98%), Query Frame = 0
Query:  128 CIESNLKTPTNHFGRFVFEPLDIGQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIILNLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTISDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTEEIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQQIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWTRDDLLEIKNLGPKSVDEIQTKLTN 424
            CIES  K+    +G FV EPL  GQG +IG  LRR ++++L G  I+ +RIAGIN+EFS I G+REDVLEIILNLKE++ KS  TET   R++IQGP ++T     +PP +E+++P  +I TI  N++FE+E K++ G GY L ++   D+ +D++ ID+ FMP  K N+  EE +  L + +EKLFL++WTNGSI+P+E+I     +L      + NI    + +   NS + I     N I IE LQLS R  N LK+ +I+ I +L  +++DDLLEIKN G KS +E+   L+N
Sbjct:    8 CIESKNKSAREQYGHFVLEPLQKGQGITIGNSLRRTILSELKGAAIVAVRIAGINHEFSTITGVREDVLEIILNLKEVVLKSYSTETQIGRIKIQGPAVITTGLFDIPPEVEVIDPTQYIATICSNTIFEMEFKIEQGYGYKLVDKGIDDKSIDFLQIDAIFMPAQKFNYKVEEKKLNLNTTQEKLFLEVWTNGSISPQEAISEGASILTQIFHPLTNISFKSKKEAYINSEKQI-----NQILIEELQLSARAYNCLKRVQIHSIADLLNYSQDDLLEIKNFGQKSAEEVIEALSN 299          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1670.4526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2XXY3_GALSU1.080e-11846.14DNA-directed RNA polymerase n=1 Tax=Galdieria sulp... [more]
A0A8E5XRJ1_9PHAE7.050e-8846.73DNA-directed RNA polymerase subunit alpha n=1 Tax=... [more]
A0A222AIC1_9CRYP5.880e-8447.60DNA-directed RNA polymerase subunit alpha n=2 Tax=... [more]
A0A7S6UA03_9STRA5.430e-8248.91DNA-directed RNA polymerase subunit alpha n=1 Tax=... [more]
A0A812TYL6_9DINO5.070e-8035.82RpoA protein (Fragment) n=1 Tax=Symbiodinium necro... [more]
UPI001FCD5B8A2.180e-7945.05RNA polymerase alpha subunit n=1 Tax=Glaucosphaera... [more]
A0A4D6WZP7_9FLOR8.970e-7945.89DNA-directed RNA polymerase subunit alpha n=1 Tax=... [more]
A0A1C9CD00_9RHOD1.050e-7843.14DNA-directed RNA polymerase subunit alpha n=1 Tax=... [more]
A0A0B5W2M2_9FLOR1.190e-7845.45DNA-directed RNA polymerase subunit alpha n=4 Tax=... [more]
A0A1Z1MUL0_9FLOR1.190e-7845.12DNA-directed RNA polymerase subunit alpha n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 140..346
e-value: 5.4E-38
score: 142.2
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 146..338
e-value: 8.7E-13
score: 48.5
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 170..289
e-value: 9.7E-63
score: 213.1
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 170..290
IPR019981Ribosomal protein S11, bacterial-typeTIGRFAMTIGR03632TIGR03632coord: 7..124
e-value: 3.0E-49
score: 164.3
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 181..272
e-value: 3.7E-15
score: 56.2
NoneNo IPR availableGENE3D1.10.150.20coord: 356..428
e-value: 3.3E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR32108:SF0DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHAcoord: 127..428
NoneNo IPR availablePANTHERPTHR32108FAMILY NOT NAMEDcoord: 127..428
NoneNo IPR availablePRODOMPD001179coord: 371..422
e-value: 1.0E-6
score: 129.0
NoneNo IPR availableSUPERFAMILY47789C-terminal domain of RNA polymerase alpha subunitcoord: 367..425
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 12..126
IPR001971Ribosomal protein S11PFAMPF00411Ribosomal_S11coord: 16..126
e-value: 5.0E-38
score: 129.9
IPR001971Ribosomal protein S11HAMAPMF_01310Ribosomal_S11coord: 5..127
score: 30.514
IPR036603RNA polymerase, RBP11-like subunitGENE3D3.30.1360.10coord: 139..337
e-value: 9.7E-63
score: 213.1
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 126..345
IPR011260RNA polymerase, alpha subunit, C-terminalPFAMPF03118RNA_pol_A_CTDcoord: 362..423
e-value: 1.5E-17
score: 63.1
IPR036967Ribosomal protein S11 superfamilyGENE3D3.30.420.80coord: 1..127
e-value: 2.8E-46
score: 158.7
IPR011773DNA-directed RNA polymerase, alpha subunitTIGRFAMTIGR02027TIGR02027coord: 141..425
e-value: 7.4E-81
score: 269.5
IPR011773DNA-directed RNA polymerase, alpha subunitHAMAPMF_00059RNApol_bact_RpoAcoord: 111..430
score: 27.49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1670contigL-elsbetiae_contig1670:12365..13780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1670.4526.1mRNA_L-elsbetiae_contig1670.4526.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1670 12365..13780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1670.4526.1 ID=prot_L-elsbetiae_contig1670.4526.1|Name=mRNA_L-elsbetiae_contig1670.4526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=431bp
NFKIKKKKIKRTILKGIIHIQSTYNNTIVTITDLNGNTLSWASAGTVDFK
GSRKSTPFAAQKAAEQATIKAKELYGLKRVNVIIKGPGSGREPAIRGVHL
NKIKILSIKDVTQIAYNGCRPPKRRRYCIESNLKTPTNHFGRFVFEPLDI
GQGTSIGTMLRRALIADLVGFRIIGIRIAGINNEFSIIPGIREDVLEIIL
NLKEIIFKSDLTETTYVRLRIQGPCIVTADYLKLPPGIEILNPHNHILTI
SDNSVFEIEIKLKSGKGYNLAEESKTDEFLDYIPIDSNFMPVSKINFFTE
EIEPLLESKKEKLFLDIWTNGSITPEESIKRATIVLMSWLINIQNIKPYQ
QIQIIKNSSQNIKKDKNNNIPIEILQLSPRLCNILKKSKINYIQELKKWT
RDDLLEIKNLGPKSVDEIQTKLTNYFELII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR036643RNApol_insert_sf
IPR019981Ribosomal_S11_bac-type
IPR011262DNA-dir_RNA_pol_insert
IPR001971Ribosomal_S11
IPR036603RBP11-like
IPR011260RNAP_asu_C
IPR036967Ribosomal_S11_sf
IPR011773DNA-dir_RpoA