mRNA_L-elsbetiae_contig167.4521.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI) HSP 1 Score: 137 bits (346), Expect = 8.810e-37 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVYQ 237 L ++VDDHCDAL+K+H AIR GALPF+GLSA+HFDAHPDLMVTPDMPA TCF P +LY TLA EGGIAEWILPLVYQ Sbjct: 18 LRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQ 96
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: A0A7S1GEV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEV3_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.140e-22 Identity = 46/79 (58.23%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPF-SGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 L V VVDDH DAL +HA IR G LPF S + +H DAHPDL+ P PA+ F P LY LA ++GGIAEW+LPLVY Sbjct: 72 LRVAVVDDHDDALRHIHAGIRDGTLPFASTFAVVHVDAHPDLLAMPSTPASLAFAPSALYDALADSDGGIAEWMLPLVY 150
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: A0A835Z3T2_9STRA (UPF0489 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T2_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 8.640e-19 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 13 VVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVYQ 237 VV+DH DAL H A+R+ L G++ +H DAHPDL VT DM A CF P+ LY L + GGIAEWI+PLVY+ Sbjct: 20 VVEDHHDALPFWHLAMRRKRLAQQGITMVHIDAHPDLCVTEDMQADICFQPRALYDALDNSVGGIAEWIIPLVYE 94
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: A0A1V9Z4E5_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4E5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.690e-14 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 L V+VVDDH H AIR+ LPFS ++ +H DAHPDL +PAAT F P+ LY L ++ GIA ++LPL Y Sbjct: 8 LPVYVVDDH-------HHAIRRRLLPFSNVTIVHLDAHPDLAFPRSIPAATIFAPEALYDALDASDAGIASFLLPLAY 78
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: UPI001B88CF36 (UPF0489 protein C5orf22 homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88CF36) HSP 1 Score: 72.4 bits (176), Expect = 5.430e-13 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 + F+V+DH + + +H I LPF GL+ +HFD+HPDL++ +MPA T F LY TL+ I WI+PLVY Sbjct: 15 IQAFIVEDHNEVVPYIHTYIGSKQLPFEGLTLIHFDSHPDLLIPLNMPADTVFNKHTLYETLS-----IENWIMPLVY 87
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: UPI001601E1B2 (UPF0489 protein C5orf22 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601E1B2) HSP 1 Score: 63.9 bits (154), Expect = 5.170e-10 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 7 VFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 V+VV+DH DAL ++ AI LP G++ +H D+HPD+++ MPA T F ++L+ TL+ I WILP Y Sbjct: 16 VWVVEDHNDALYYIYRAIGSHHLPLHGVTMVHLDSHPDMLIPWKMPADTVFNREELFNTLS-----IENWILPAAY 86
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: UPI001EAFD9A3 (UPF0489 protein C5orf22 homolog isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFD9A3) HSP 1 Score: 63.5 bits (153), Expect = 7.100e-10 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 + V +V+DH + + +H I LPFS L+ +HFD+HPD+++ DM A T F LY L+ I WILPLV+ Sbjct: 10 IPVLIVEDHHEVVPHIHRNIGSKHLPFSDLTLVHFDSHPDMLIPVDMQADTVFDKTALYDALS-----IENWILPLVH 82
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: A0A6P4YJT9_BRABE (UPF0489 protein C5orf22 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YJT9_BRABE) HSP 1 Score: 63.2 bits (152), Expect = 9.670e-10 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 7 VFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 V+VV+DH DAL ++ AI LP G++ +H D+HPD+++ MPA T F Q+L+ L+ I WILP Y Sbjct: 16 VWVVEDHNDALYYIYRAIGSHHLPLHGVTMVHLDSHPDMLIPWKMPADTVFDRQELFNALS-----IENWILPAAY 86
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: UPI001EE55A23 (LOW QUALITY PROTEIN: UPF0489 protein C5orf22 homolog n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE55A23) HSP 1 Score: 62.0 bits (149), Expect = 2.480e-9 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 + V +V++H + + +H I LPFS L+ +HFD+HPD+++ DM A T F + LY L+ I WILPL + Sbjct: 10 IPVLIVENHHEVVPLIHRDIGSKHLPFSDLTLIHFDSHPDMLIPVDMQADTVFVKEALYDALS-----IENWILPLAH 82
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Match: UPI001404140E (UPF0489 protein C5orf22 homolog isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001404140E) HSP 1 Score: 61.6 bits (148), Expect = 3.460e-9 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 1 LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAATCFCPQDLYYTLATAEGGIAEWILPLVY 234 L V+VV++H D L ++ A+ LP GL+ LH DAHPDL++ +PA T P L+ +E I W+LP V+ Sbjct: 12 LPVWVVEEHNDVLPHIYRAMGSRHLPMEGLTLLHVDAHPDLLLPVSLPARTVHDPHTLF-----SELSIENWVLPAVF 84 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig167.4521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig167.4521.1 >prot_L-elsbetiae_contig167.4521.1 ID=prot_L-elsbetiae_contig167.4521.1|Name=mRNA_L-elsbetiae_contig167.4521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp LSVFVVDDHCDALNKVHAAIRQGALPFSGLSALHFDAHPDLMVTPDMPAAback to top mRNA from alignment at L-elsbetiae_contig167:52290..52541+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig167.4521.1 ID=mRNA_L-elsbetiae_contig167.4521.1|Name=mRNA_L-elsbetiae_contig167.4521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=252bp|location=Sequence derived from alignment at L-elsbetiae_contig167:52290..52541+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig167:52290..52541+ >mRNA_L-elsbetiae_contig167.4521.1 ID=mRNA_L-elsbetiae_contig167.4521.1|Name=mRNA_L-elsbetiae_contig167.4521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=504bp|location=Sequence derived from alignment at L-elsbetiae_contig167:52290..52541+ (Laminarionema elsbetiae ELsaHSoW15)back to top |