prot_L-elsbetiae_contig16539.4431.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16539.4431.1
Unique Nameprot_L-elsbetiae_contig16539.4431.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length296
Homology
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BLAST of mRNA_L-elsbetiae_contig16539.4431.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.090e-40
Identity = 168/343 (48.98%), Postives = 181/343 (52.77%), Query Frame = 0 
Query:    1 QVALCALAQLFIVVTHPPLVRLLVLETLGSGDGAREPCPA-----------------------------------AERGAGSSAPLLALLQGDREELCLGALVVLQALAQNRVVRTDLGLAQGPDTDXXXXXXXFPAHDHEGL----TGATNAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQA---STGSLGVQILDAAVDALCCMLAPSAA--AVRETTAXXXXATAAGQSAGPATVTVAGSGMERLEAXXXXXXXXXXXXXXXXXXXXENG---QGGEKVAAGAXXXAGAGRRGVRESGGAGAVPAPATPLCPRRPRRHHLVLRLCGKVLASL 296
            QVALCALAQLFIVVTHPPLVRLLVLETLGS +  +E  P                                    A  G G + PLLALLQGDREELCLGALVVLQALAQN+VVRTDLGL Q  DT          A  HEGL     G T AADG                 XXXXXXXXXXXXXXX  A   S   LG+++LDAAVDALCCMLAPS A  AVR            G+ AG +    AG     + A        XXXXXX      E G   +GG + AAG+            E G    VP P TP  PR PRRHHLVLRLCGKVLASL
Sbjct:  706 QVALCALAQLFIVVTHPPLVRLLVLETLGS-EATQELRPVGAVAXXXXXXXXXXXXXXXTAEVDNIGAAAGGEERAGSGVGRAPPLLALLQGDREELCLGALVVLQALAQNQVVRTDLGLTQ--DTAYNS------AQYHEGLPDAAAGGTGAADGQPNGGYAEEGGQQTAAPXXXXXXXXXXXXXXXXAAADLSARPLGMEMLDAAVDALCCMLAPSTATQAVR------------GEGAGESGEETAG-----VVAVGTAAGAKXXXXXXALESGGEGGVHPKGGREEAAGS------------ERGHESTVPVPPTPFLPR-PRRHHLVLRLCGKVLASL 1009
[Close]
BLAST of mRNA_L-elsbetiae_contig16539.4431.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.650e-28
Identity = 132/315 (41.90%), Postives = 142/315 (45.08%), Query Frame = 0 
Query:    1 QVALCALAQLFIVVTHPPLVRLLVLETLGSGDGAREPCPAAERGAGSSAPLLALLQGDREELCLGALVVLQALAQNRVVRTDLGLAQGPDTDXXXXXXXFPAHDHEGLTGA----TNAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD----QASTGSLGVQILDAAVDALCCMLAPSAAAV-----------RETTAXXXXATAAGQSAGPATVTVAGSGMERLEAXXXXXXXXXXXXXXXXXXXXENGQGGEKVAAGAXXXAGAGRRGVRESGGAGAVPAPATPLCPRRPRRHHLVLRLCGKVLASL 296
            QVALCALAQLFIVVTHPPLVRLLVLETLGS                                        +ALAQN+VVRTDLGL Q    D         A DHEGL GA    T AADG                   XXXXXXXXXXXXX       S   LG+++LDAAVDALCCMLAPS A              ETT      TAAG   G  +  +   G   +                         +GG K AAG+            E G    VP P TP  PR PRRHHLVLRLCGKVLASL
Sbjct:  335 QVALCALAQLFIVVTHPPLVRLLVLETLGS----------------------------------------EALAQNQVVRTDLGLTQDAAEDS--------AQDHEGLPGAAAAGTGAADGQPNGGCAEEEKQQTAAGEGXXXXXXXXXXXXXPAPAVDPSARPLGMEMLDAAVDALCCMLAPSTATQAVGGEGAGESGEETTGVVAVGTAAGTKEGAPSSALGSGGGAGVHP-----------------------EGGRKEAAGS------------ERGHESTVPVPPTPFLPR-PRRHHLVLRLCGKVLASL 565
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16539.4431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K768_9PHAE1.090e-4048.98FPL domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FXA7_ECTSI1.650e-2841.90FPL domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..296
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16539contigL-elsbetiae_contig16539:1499..3111 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16539.4431.1mRNA_L-elsbetiae_contig16539.4431.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16539 1498..3111 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16539.4431.1 ID=prot_L-elsbetiae_contig16539.4431.1|Name=mRNA_L-elsbetiae_contig16539.4431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp
QVALCALAQLFIVVTHPPLVRLLVLETLGSGDGAREPCPAAERGAGSSAP
LLALLQGDREELCLGALVVLQALAQNRVVRTDLGLAQGPDTDGDGDGDGF
PAHDHEGLTGATNAADGGSSGGGGDAANQAEGSAAAAAAAAAAAAAAAAD
QASTGSLGVQILDAAVDALCCMLAPSAAAVRETTAAAAVATAAGQSAGPA
TVTVAGSGMERLEAAAAAADATASSETVGCSAALENGQGGEKVAAGAGAG
AGAGRRGVRESGGAGAVPAPATPLCPRRPRRHHLVLRLCGKVLASL
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