prot_L-elsbetiae_contig16005.4150.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16005.4150.1
Unique Nameprot_L-elsbetiae_contig16005.4150.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length113
Homology
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BLAST of mRNA_L-elsbetiae_contig16005.4150.1 vs. uniprot
Match: A0A6H5L2H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H7_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 9.780e-17
Identity = 53/77 (68.83%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    1 SKYKKLKKKLKDAKMLKKKMMGEVTGSGASGKDKKXXXXXXXKLSTKTKSMKLDGHASASSWRFHDSGGESSDSCSS 77
            SKYKKLK  LKDAK LKK +M E  GS  S  +KK   X   KLSTKTKSM LDGHA +SSWR HDSGGESSD CSS
Sbjct:    5 SKYKKLKXTLKDAKALKK-IMDESVGS-TSSPEKKKVKXKIKKLSTKTKSMNLDGHAGSSSWRIHDSGGESSDPCSS 79
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BLAST of mRNA_L-elsbetiae_contig16005.4150.1 vs. uniprot
Match: D8LJ38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ38_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.760e-9
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:   43 KLSTKTKSMKLDGHASASSWRFHDSGGESSDSCS 76
            KLSTKTKSMKLDGHAS+SSWR H SGGESSDSCS
Sbjct:   59 KLSTKTKSMKLDGHASSSSWRIHGSGGESSDSCS 92
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16005.4150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2H7_9PHAE9.780e-1768.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ38_ECTSI1.760e-991.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16005contigL-elsbetiae_contig16005:687..2594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16005.4150.1mRNA_L-elsbetiae_contig16005.4150.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16005 687..2594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16005.4150.1 ID=prot_L-elsbetiae_contig16005.4150.1|Name=mRNA_L-elsbetiae_contig16005.4150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp
SKYKKLKKKLKDAKMLKKKMMGEVTGSGASGKDKKKAKKKIKKLSTKTKS
MKLDGHASASSWRFHDSGGESSDSCSSQSSDSDWEGSSCSSSSSSSSSDG
SDGGGSDGGGSD*
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