mRNA_L-elsbetiae_contig15966.4113.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15966.4113.1
Unique NamemRNA_L-elsbetiae_contig15966.4113.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 3.510e-164
Identity = 262/376 (69.68%), Postives = 291/376 (77.39%), Query Frame = 1
Query:    1 FMQVVGAIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKE---EEANKMGEESSSDS--SSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSC-DMGRYENFLRAEAATLEELIEVEGRCKWAELALLLVSQRLANALEPPQQXXXXXXXXXXXXXXXEASTGGDADEAAKVRTSCRSMAARLSELDPMHRRFYEFVERGGSVFG-EHVGGAAGET 1107
            + +VVGAIRHKRA GQMD EYKQLLGKLLRLHPDYYSMWNFRKEAVLAELS I D  S++   ++ +K  EE SS +  S + +E ++K     +Y+EEL LSVDCIKRNPKSYPAWHHHKWALERGLDLLG RSAL+                          AERMGLSA+EEF+FTTDKIKQNFSNYSAFHFRSKVLPRMVEEAG+DRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA++G  SC D  RYEN LRAEAATL ELIEVE RCKWAE+ALLLVSQRLANALEP  Q      XXXXXXXXX  + G  + EA +VR SCR MAARLSELDPMH RFYEFVE+GG+V G + + G+A E 
Sbjct:   26 YKKVVGAIRHKRATGQMDAEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKK----IYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCKWAEVALLLVSQRLANALEPRPQPPRAQDXXXXXXXXXVTAAGNGSTEAGEVRESCRGMAARLSELDPMHGRFYEFVEKGGTVMGGQQMRGSAREA 397          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.040e-57
Identity = 121/328 (36.89%), Postives = 163/328 (49.70%), Query Frame = 1
Query:   70 LLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAG-NDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSCDM-GRYENFLRAEAATLEELIEVEGRCKWAELALLLVSQRLANALEPPQQXXXXXXXXXXXXXXXEASTGGDADEAAKVRTSCRSMAARLSELDPMHRRFYE 1047
            ++ K++R++PDYYSMWN+RKEA L  L          E   K+G +            ER+A    V ++EL L+    KRNPK Y AWHH +W LERG D +G  +A                             E+ GLSA+E+F FTT+KI +NFSNYSAFH+RSK+LP + E  G      L+  EL++ H A FTEP DQS WWYH FL+ WA E     +   +Y   L+ E   + EL+ VE RCKWA    L+    L  AL                     A T  D  E  ++    RS+   L ++DPMH+ +Y+
Sbjct:   55 VVDKVVRVNPDYYSMWNYRKEAALPILEAA-------EGQAKVGVQ------------ERRAQ---VVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWA----LVTLHHLLCAL---------------------ARTAQDT-EGVELMAEARSLVTTLVDVDPMHKSYYD 334          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A7S1TWU3_9STRA (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWU3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.140e-35
Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 1
Query:   19 AIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGER-SALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSCDMGRYENFLRAEAATLEELIEVEGRCKWAELAL 843
            A++  R  G        L  +LLR++PD YS WN R+E + A  +               GE     +  A +      L   V   EL L+ + ++R PKSYPAWHH +W LER   L G+R +A +EXXXXXXXXXXXXXXXXXXXXXXXX A   G++ +E   +T D++  NFSNYSAFH RS+VLPR+ E    D   +L++EL L  +   TEP DQS WWY+ FLL  A       + G     LR E   L +L+E+E  CKWA + L
Sbjct:   78 ALQDVRRRGDNSDAAVDLGAQLLRVNPDAYSAWNHRREMLFARTTAA------------AGETEGGGAGGAWE------LAADVAAGELRLTAEALRRQPKSYPAWHHRRWVLER---LAGDRETAFAEXXXXXXXXXXXXXXXXXXXXXXXXAAAVAGVTPEENLAYTQDRLDVNFSNYSAFHERSQVLPRL-EAYREDPLAVLAEELMLVQNITVTEPEDQSAWWYYRFLL--AALLQVEAEDGVKLTALRGEQQNLRDLLELETDCKWALVML 329          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A7R9U2X8_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X8_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.490e-34
Identity = 113/263 (42.97%), Postives = 147/263 (55.89%), Query Frame = 1
Query:   34 RANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSCDMGRYENFLRAEAATLEELIEVEGRC 822
            R  G      K L  +LLR++PD YS+WN+R++ + A  SG                E++ +S  A  +         V QEELV+S + +KR PKSYPAW+H KW L+R L+   ER+  SEXXXXXXXXXXXXXXXXXXXXX    A   G++ +E + +T D++  NFSNYSAFH RS++L  + E  G D+   L  ELD       T P DQS WWY+ FLL    + A    +      LR E   L EL+EVE  C
Sbjct:   52 RDKGTFTSAAKDLTAQLLRVNPDNYSVWNYRRQILFA--SG----------------ETAPESWKAPPD---------VAQEELVMSAEALKRQPKSYPAWYHRKWILDR-LESGRERTLQSEXXXXXXXXXXXXXXXXXXXXXRYV-AHLAGVTPEENYEYTEDRLNANFSNYSAFHERSRILASLAEY-GEDKISTLQQELDFVQQITVTAPDDQSAWWYYRFLLAAVTDDA-DIPIEEKLRLLRQEVGRLNELVEVELEC 283          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: UPI000C78249F (geranylgeranyl transferase type-2 subunit alpha-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78249F)

HSP 1 Score: 132 bits (333), Expect = 4.420e-31
Identity = 79/244 (32.38%), Postives = 125/244 (51.23%), Query Frame = 1
Query:    1 FMQVVGAIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEG 732
            + + +G +  +RA G++D +   + G++L+ +PD  ++WN RKE +   L  I  GT KE++  + GE+   +     +E         +   EL L+  C+  NPKSY AWHH  W LE  ++        S                          A++ G+  Q+E  FT +KI++NFSNYSA+H+RSK+LP +  +  + +   +  ELDL  +A FT+PAD S W+YH +LL    EG
Sbjct:   28 YRKAMGVLLSRRAEGKLDDQQLVISGQVLQGNPDISTLWNIRKEIL---LHYINLGTQKEKDVGE-GEKGQEEVDCGKEENVPMHDQDEMLSSELDLTQQCLIANPKSYGAWHHRTWCLEHMIN-----PDWSRELALCRKFLKLDERNFHCWDYRKWVADKAGVKPQQELEFTLEKIEENFSNYSAWHYRSKLLPLLNPDTSSIQEDQVHKELDLVQNAAFTDPADSSAWFYHTWLLGQESEG 262          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A0P1AIP1_PLAHL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIP1_PLAHL)

HSP 1 Score: 128 bits (322), Expect = 2.490e-30
Identity = 97/353 (27.48%), Postives = 154/353 (43.63%), Query Frame = 1
Query:    1 FMQVVGAIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSCDMGRYENFLRAEAATLEELIEVEGRCKWAELALLLVSQRLANALEPPQQXXXXXXXXXXXXXXXEASTGGDADEAAKVRTSCRSMAARLSELDPMHRRFYEFVER 1059
            + +V G +   +     +     L   LL L+P+++ +WN+R++ + A                            A+K  +  A  + + + EL L++D ++RNPKSY  W   KW ++  L  L +   L +                          E   +  +++  FTT KI+QNFSNYSA H RS  LP+ +        +++ DE++L   A+FTEP DQS W+Y+ +L+T   E   S      E FL+ +A  LEEL+E+E   KWA + L  +  RL   +                      + GG   E AKV   C  +  R   LDP HR +Y+ ++R
Sbjct:   31 YHEVAGKVLDLKRQQFFEPSVLPLTSHLLLLNPEFHMVWNYRRQTIDA---------------------------LATKSADPAAEWQELAKTELKLTLDALQRNPKSYSTWFQRKWIIDHRLGDLQKEIGLCDKLLNLDERNFHCWNYRRHV------CELANVPKEDQLAFTTQKIEQNFSNYSALHHRSINLPKPLTA------EVIFDEIELIQQAVFTEPDDQSAWFYYRWLVTSMVELVKSSAENAVE-FLKKQAQWLEELVEMEAEAKWAIVTLADICGRLGVII----------------------NVGGW--EEAKVH--CLDLYDRAIALDPDHRSYYDDMKR 317          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A225WMF4_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WMF4_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.230e-29
Identity = 94/349 (26.93%), Postives = 151/349 (43.27%), Query Frame = 1
Query:    1 FMQVVGAIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSCDMGRYENFLRAEAATLEELIEVEGRCKWAELALLLVSQRLANALEPPQQXXXXXXXXXXXXXXXEASTGGDADEAAKVRTSCRSMAARLSELDPMHRRFYE 1047
            + +V G +   +     +     L   LL L+P+++ +WN+R++A+ A                            A K    +A ++ + + EL L++D ++RNPKSY AW   KW ++RGL  L +   L +                          +  G+S  ++  FTT KI+QNFSNYSA H RS  LP  +         ++ +E+ L   A+FTEP DQS W+Y+ +L+T   E   S        FL+++   L+EL E+E   KW  +AL  +  R+    E                        G  +++ K       +  R+ +LDP HRR+YE
Sbjct:   31 YHEVAGKVLDMKRQQVYEPSVLPLTSHLLLLNPEFHVVWNYRRQAIDA---------------------------LAQKAENPEAEMQEMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRGLGDLKKEIGLCDKLLNLDERNFHCWNYRRHV------GKLAGMSEDDQLGFTTQKIEQNFSNYSALHHRSISLPDPLTA------DVVFEEIGLVQQAVFTEPDDQSAWFYYRWLVTSMLELVESSAEDT-AGFLKSQVQWLDELQEMETEAKWVIVALADLHYRIGTITEV-----------------------GGWEQSKKQSVD---LYHRVIDLDPDHRRYYE 313          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A2B4S3B1_STYPI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S3B1_STYPI)

HSP 1 Score: 127 bits (318), Expect = 1.460e-29
Identity = 88/291 (30.24%), Postives = 138/291 (47.42%), Query Frame = 1
Query:    1 FMQVVGAIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMV--EEAGNDRWQ--LLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATS--CDMGRYE------NFLRAEAATLEELIEVE--GRCKWA 831
            + +    I  KR NG+MD E   L  ++L  +PD+ ++WNFR+E  L +     D +  EE                         ++ + Q+EL    +C++ NPKSY  W+H +W +E        +    E                          ++  +S  +EFNF+T+KIK+NFSNYS++H+RSK+LP +   +  G++R +   L  E DL  +A FT+P DQS W+YH +LL   E G     C MGR E      + L+ E  +   L+E E   +CK++
Sbjct:   28 YTETTSRIYQKRKNGEMDKESLSLSEQVLAANPDFSTLWNFRREVFLHKK----DESPPEE-------------------------IQDLCQKELFFLKNCLQVNPKSYGVWYHRQWIME-----FMPQPNWKEELQLCNKFLSYDERNFHCWDYRRYTVQKANVSPMDEFNFSTEKIKENFSNYSSWHYRSKLLPLIHPDQSGGSERVEEGALMKEFDLAQNAYFTDPYDQSAWFYHRWLLG-REMGYLELICQMGRSELTAVHSSVLQQELESCRLLLEEEPDNKCKYS 283          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A0M0JE27_9EUKA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE27_9EUKA)

HSP 1 Score: 126 bits (316), Expect = 2.020e-29
Identity = 87/296 (29.39%), Postives = 130/296 (43.92%), Query Frame = 1
Query:   19 AIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWALERG---------LDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDR----WQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSC-DMGRYENFLRAEAATLEELIEVEGRCKWAELALLLVSQRL 864
            A   +RA    D    + + K++  +PD+ +MWNFR+E VL  +    D                             A  +     E  L+ +C+  NPKSYP W+H +W L  G         L L  +  AL +                             G++A+ E  FTT KI+ NFSNYSA+H+RSK+LP +   AG +       +L +EL+L  +A FT P D S W+YH +L+     GA +      +E  +RAE   ++EL+E+E  CKW   A   + + L
Sbjct:   32 AAMERRAAKVYDAASLEAVAKVVTENPDFATMWNFRRE-VLGHMFPDAD----------------------------VAARKAACLAEFALTQECLGINPKSYPVWYHREWVLLWGECEWQWPVELKLTAKLLALDDRNFHCWTYRRNVVRVA-------------GVTAEAELAFTTTKIQANFSNYSAWHYRSKLLPAVHASAGAEGAAQLGAVLRNELELVRNAFFTAPEDSSAWFYHRWLIAQLAPGAAAALPPAEFEALVRAELQMVDELLELEPECKWPLAAAAFLGRTL 285          
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Match: A0A8J5DNR5_9CHEL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5DNR5_9CHEL)

HSP 1 Score: 124 bits (311), Expect = 2.140e-29
Identity = 78/240 (32.50%), Postives = 118/240 (49.17%), Query Frame = 1
Query:   31 KRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSGIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDCIKRNPKSYPAWHHHKWAL--------ERGLDLLGERSALSEXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGNDRWQL----LSDELDLTHDAMFTEPADQSVWWYHHFLL 714
            KR N ++D +  +L  ++L L+PD+YS+WNFRKE +L         T KEEE  K+                        ++++L  +  C++ NPKSY AWHH  W +        ER L +  +   L E                          +  G+S  +E  F+++KI+ NFSNYSA+H+RSK+LP  +  AGN   ++    L +E +L  +A FT+P DQS W+YH +LL
Sbjct:   38 KRENRELDEDALKLTTEILSLNPDFYSLWNFRKEIILEFKR-----TRKEEEIIKL------------------------FKDDLGFTEICLRNNPKSYCAWHHRHWVMQNTPKPDWERELKICNQYLLLDERNFHCWDYRRFV-------------VQESGISNNKELEFSSEKIENNFSNYSAWHYRSKLLP--LVHAGNSYKKIDESKLLEEFELVQNAAFTDPNDQSAWFYHRWLL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15966.4113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI3.510e-16469.68Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA2.040e-5736.89Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S1TWU3_9STRA5.140e-3543.12Geranylgeranyl transferase type-2 subunit alpha (F... [more]
A0A7R9U2X8_9STRA2.490e-3442.97Geranylgeranyl transferase type-2 subunit alpha n=... [more]
UPI000C78249F4.420e-3132.38geranylgeranyl transferase type-2 subunit alpha-li... [more]
A0A0P1AIP1_PLAHL2.490e-3027.48Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A225WMF4_9STRA1.230e-2926.93Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A2B4S3B1_STYPI1.460e-2930.24Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A0M0JE27_9EUKA2.020e-2929.39Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A8J5DNR5_9CHEL2.140e-2932.50Geranylgeranyl transferase type-2 subunit alpha n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15966contigL-elsbetiae_contig15966:398..2638 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score472.6
Seed ortholog evalue1.6e-130
Seed eggNOG ortholog2880.D8LK31
Preferred nameRABGGTA
KEGG koko:K14050,ko:K20306
Hectar predicted targeting categoryother localisation
GOsGO:0003008,GO:0003674,GO:0003824,GO:0004659,GO:0004661,GO:0004663,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005968,GO:0006464,GO:0006605,GO:0006612,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0007600,GO:0007601,GO:0008104,GO:0008150,GO:0008152,GO:0008318,GO:0009987,GO:0010035,GO:0010038,GO:0010941,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016740,GO:0016765,GO:0017016,GO:0017137,GO:0018342,GO:0018344,GO:0019538,GO:0019899,GO:0022607,GO:0031267,GO:0031974,GO:0031981,GO:0032501,GO:0032991,GO:0033036,GO:0034613,GO:0036211,GO:0042221,GO:0042579,GO:0042886,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046686,GO:0046907,GO:0046982,GO:0046983,GO:0048193,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090150,GO:0097354,GO:0140096,GO:1901564,GO:1902494,GO:1990234,GO:1990778
EggNOG free text desc.protein geranylgeranylation
EggNOG OGsCOG5536@1,KOG0529@2759
EC2.5.1.60
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01006,ko04131
Ec32 ortholog descriptionProtein prenyltransferase, alpha subunit
Ec32 orthologEc-06_007980.1
Exons6
Model size1110
Cds size1107
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815656.8861246-UTR-L-elsbetiae_contig15966:397..4001622815656.8861246-UTR-L-elsbetiae_contig15966:397..400Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15966 398..400 +
1691683018.8322313-UTR-L-elsbetiae_contig15966:397..4001691683018.8322313-UTR-L-elsbetiae_contig15966:397..400Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15966 398..400 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815656.8995228-CDS-L-elsbetiae_contig15966:400..5441622815656.8995228-CDS-L-elsbetiae_contig15966:400..544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 401..544 +
1691683018.84399-CDS-L-elsbetiae_contig15966:400..5441691683018.84399-CDS-L-elsbetiae_contig15966:400..544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 401..544 +
1622815656.914044-CDS-L-elsbetiae_contig15966:757..9961622815656.914044-CDS-L-elsbetiae_contig15966:757..996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 758..996 +
1691683018.8534465-CDS-L-elsbetiae_contig15966:757..9961691683018.8534465-CDS-L-elsbetiae_contig15966:757..996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 758..996 +
1622815656.9263268-CDS-L-elsbetiae_contig15966:1203..13571622815656.9263268-CDS-L-elsbetiae_contig15966:1203..1357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 1204..1357 +
1691683018.862498-CDS-L-elsbetiae_contig15966:1203..13571691683018.862498-CDS-L-elsbetiae_contig15966:1203..1357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 1204..1357 +
1622815656.9379654-CDS-L-elsbetiae_contig15966:1631..17481622815656.9379654-CDS-L-elsbetiae_contig15966:1631..1748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 1632..1748 +
1691683018.8722498-CDS-L-elsbetiae_contig15966:1631..17481691683018.8722498-CDS-L-elsbetiae_contig15966:1631..1748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 1632..1748 +
1622815656.948884-CDS-L-elsbetiae_contig15966:1976..21441622815656.948884-CDS-L-elsbetiae_contig15966:1976..2144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 1977..2144 +
1691683018.8829026-CDS-L-elsbetiae_contig15966:1976..21441691683018.8829026-CDS-L-elsbetiae_contig15966:1976..2144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 1977..2144 +
1622815656.9589198-CDS-L-elsbetiae_contig15966:2353..26381622815656.9589198-CDS-L-elsbetiae_contig15966:2353..2638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 2354..2638 +
1691683018.8943927-CDS-L-elsbetiae_contig15966:2353..26381691683018.8943927-CDS-L-elsbetiae_contig15966:2353..2638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15966 2354..2638 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15966.4113.1prot_L-elsbetiae_contig15966.4113.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15966 401..2638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15966.4113.1

>prot_L-elsbetiae_contig15966.4113.1 ID=prot_L-elsbetiae_contig15966.4113.1|Name=mRNA_L-elsbetiae_contig15966.4113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=369bp
MQVVGAIRHKRANGQMDGEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELS
GIGDGTSKEEEANKMGEESSSDSSSASKETERKALLRGVYQEELVLSVDC
IKRNPKSYPAWHHHKWALERGLDLLGERSALSEDLALCAKFLELDGRNFH
CWAHRMWVAERMGLSAQEEFNFTTDKIKQNFSNYSAFHFRSKVLPRMVEE
AGNDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGATSCDMG
RYENFLRAEAATLEELIEVEGRCKWAELALLLVSQRLANALEPPQQPPGA
EAGDSSGTSSGEASTGGDADEAAKVRTSCRSMAARLSELDPMHRRFYEFV
ERGGSVFGEHVGGAAGET*
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mRNA from alignment at L-elsbetiae_contig15966:398..2638+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15966.4113.1 ID=mRNA_L-elsbetiae_contig15966.4113.1|Name=mRNA_L-elsbetiae_contig15966.4113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2241bp|location=Sequence derived from alignment at L-elsbetiae_contig15966:398..2638+ (Laminarionema elsbetiae ELsaHSoW15)
TTCATGCAGGTGGTGGGTGCTATCCGCCACAAGCGCGCGAATGGCCAGAT GGACGGCGAGTATAAGCAGCTCTTAGGCAAGCTCTTGCGTCTGCACCCGG ACTACTACTCCATGTGGAACTTCCGCAAGGAGGCTGTACTAGCGGAGGTG AGAGCGAAAGAGACAAGGGGGTGCGAAGTAGGGTAGGGGACAGGACCAGA CCTGAAGAGGCGAGAGAGGGACACAGGGAGGCAGCGAAGCCACTCTAGCA TCAATGCTCGTCGTCCTATTACAGGCTAACCCGCTGTTTTATTTTCTTTC CCCGCCGCGCATGGATGATGAACGCCCAAAATACCCACATACAACCCGGC ACGACCAAAGCTTAGTGGAATAGGAGACGGCACCAGTAAAGAAGAGGAGG CGAATAAAATGGGCGAGGAGAGCAGCAGCGACTCATCGTCAGCTTCGAAG GAGACGGAAAGGAAAGCACTGCTGCGGGGCGTATACCAGGAGGAGCTCGT CCTTAGCGTGGACTGCATCAAGCGCAACCCGAAGTCCTACCCGGCGTGGC ACCACCACAAGTGGGCCCTGGAAAGAGGGCTGGACTTGCTGGGGGAGAGG TGAGGGAGGGAAAGTGCACCGGACGACGCACGCCTGAAACAGCAGCGTTT AGCACCCTCATTTGTAATTTCATCTGCGTGCTGTCTGCTGTCTGTCTCCG CCTTAACATGCCCACACCATCCCGTCCTCCCATGGAAGGGCTCACTTTCC AGCATAATAAAGAGCACGTGGGTCCCGCCAACCGATGCGTTACAAAACTG ATCCAGGTCAGCACTGTCAGAGGATTTGGCTCTGTGCGCCAAGTTTTTGG AGCTGGACGGCCGAAATTTCCACTGCTGGGCGCACCGTATGTGGGTGGCA GAGCGGATGGGCCTCTCGGCTCAGGAAGAGTTCAACTTCACCACCGACAA GATCAAGCAGGTATGAGTTGTAAATTAAAGCACAACTAGCTGGATCTGCA AGCGGACAGACACTGCACGCCTATTCTACCAAATCAGCTAAAAACATGGT AGATATGTTGCACGCGGAGGGGGCTCCATCACGGTTTGCGCCACTGAACC GCCATACCTGTTGAAAGGCGGGGCTATCCGGGCAGCTACGTGTGATCCAA ACATGAATCCCACTGGTTTCCTTCTTGCCTACGGTGAGACGCAAAACCGT GCCCTTCTCATGCGAGTCCTCCCGCTCCCCACAGAACTTCAGCAACTACA GCGCGTTCCACTTCCGGAGCAAGGTTCTGCCGAGAATGGTAGAGGAGGCG GGCAACGACCGATGGCAGCTGCTGTCCGACGAGCTAGACCTTACGCACGA TGTGAGTTGTGGCGTGTTGCGCCGCCGCGGTGATAACTTGGCTGCGTACC AACGGGTAGCTAAAGCTGATCCCTGGTGCACAGTGTATTCGATGGGACTG TAGAAGTTTCGTTTTCGTACATGTATCTAGTTCGCGAATCAAGAGTTGCT CGTGGCAGATGTGTTCTATCCGCTGGTATGGTCCTCGATGACACTTGTTT TGCCCGTGTGTCCTTCCCCTGCCAAACAGGCAATGTTCACCGAACCCGCG GACCAGAGCGTGTGGTGGTACCACCACTTCCTCCTCACGTGGGCCGAAGA GGGCGCCACCAGCTGCGACATGGGCCGATATGAGAACTTTCTTCGCGCCG AGGCGGCCACTCTTGAGGAGCTGATCGAGGTGGAGGGTCGGTGCAAGGTG TGTTTGGGGCTTGCGCCTCGGCAGTTCTTCCTTTTTTCCTGTTGTAGGTC CCGGGTCTTGTTTTGGATACAAATTCTACCAGCCGATAACTCACGCCTCT AGCGTAACCCCACCAACCTCCCCCGCCCTGCCTTTTCCCGTGTCTGCCTG TAACCGGCTTCTCTTTTCTCATTCAACTCTGTGCGCGTGGCACGTACTAC TCGCAGTGGGCCGAGCTTGCGCTACTCCTGGTGTCCCAACGGCTCGCCAA CGCTCTCGAACCACCACAACAGCCTCCCGGAGCGGAGGCAGGTGATAGTA GCGGTACTAGCAGTGGCGAGGCTTCAACCGGCGGGGACGCCGACGAAGCT GCGAAGGTCCGGACGAGCTGCCGTAGCATGGCGGCACGGTTATCGGAGCT CGATCCGATGCACCGCCGTTTCTACGAGTTCGTTGAGCGGGGCGGGTCAG TGTTTGGGGAGCACGTGGGAGGGGCCGCCGGCGAGACGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15966:398..2638+

>mRNA_L-elsbetiae_contig15966.4113.1 ID=mRNA_L-elsbetiae_contig15966.4113.1|Name=mRNA_L-elsbetiae_contig15966.4113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2214bp|location=Sequence derived from alignment at L-elsbetiae_contig15966:398..2638+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGGTGGTGGGTGCTATCCGCCACAAGCGCGCGAATGGCCAGATGGA
CGGCGAGTATAAGCAGCTCTTAGGCAAGCTCTTGCGTCTGCACCCGGACT
ACTACTCCATGTGGAACTTCCGCAAGGAGGCTGTACTAGCGGAGATGCAG
GTGGTGGGTGCTATCCGCCACAAGCGCGCGAATGGCCAGATGGACGGCGA
GTATAAGCAGCTCTTAGGCAAGCTCTTGCGTCTGCACCCGGACTACTACT
CCATGTGGAACTTCCGCAAGGAGGCTGTACTAGCGGAGCTTAGTGGAATA
GGAGACGGCACCAGTAAAGAAGAGGAGGCGAATAAAATGGGCGAGGAGAG
CAGCAGCGACTCATCGTCAGCTTCGAAGGAGACGGAAAGGAAAGCACTGC
TGCGGGGCGTATACCAGGAGGAGCTCGTCCTTAGCGTGGACTGCATCAAG
CGCAACCCGAAGTCCTACCCGGCGTGGCACCACCACAAGTGGGCCCTGGA
AAGAGGGCTGGACTTGCTGGGGGAGAGCTTAGTGGAATAGGAGACGGCAC
CAGTAAAGAAGAGGAGGCGAATAAAATGGGCGAGGAGAGCAGCAGCGACT
CATCGTCAGCTTCGAAGGAGACGGAAAGGAAAGCACTGCTGCGGGGCGTA
TACCAGGAGGAGCTCGTCCTTAGCGTGGACTGCATCAAGCGCAACCCGAA
GTCCTACCCGGCGTGGCACCACCACAAGTGGGCCCTGGAAAGAGGGCTGG
ACTTGCTGGGGGAGAGGTCAGCACTGTCAGAGGATTTGGCTCTGTGCGCC
AAGTTTTTGGAGCTGGACGGCCGAAATTTCCACTGCTGGGCGCACCGTAT
GTGGGTGGCAGAGCGGATGGGCCTCTCGGCTCAGGAAGAGTTCAACTTCA
CCACCGACAAGATCAAGCAGGTCAGCACTGTCAGAGGATTTGGCTCTGTG
CGCCAAGTTTTTGGAGCTGGACGGCCGAAATTTCCACTGCTGGGCGCACC
GTATGTGGGTGGCAGAGCGGATGGGCCTCTCGGCTCAGGAAGAGTTCAAC
TTCACCACCGACAAGATCAAGCAGAACTTCAGCAACTACAGCGCGTTCCA
CTTCCGGAGCAAGGTTCTGCCGAGAATGGTAGAGGAGGCGGGCAACGACC
GATGGCAGCTGCTGTCCGACGAGCTAGACCTTACGCACGATAACTTCAGC
AACTACAGCGCGTTCCACTTCCGGAGCAAGGTTCTGCCGAGAATGGTAGA
GGAGGCGGGCAACGACCGATGGCAGCTGCTGTCCGACGAGCTAGACCTTA
CGCACGATGCAATGTTCACCGAACCCGCGGACCAGAGCGTGTGGTGGTAC
CACCACTTCCTCCTCACGTGGGCCGAAGAGGGCGCCACCAGCTGCGACAT
GGGCCGATATGAGAACTTTCTTCGCGCCGAGGCGGCCACTCTTGAGGAGC
TGATCGAGGTGGAGGGTCGGTGCAAGGCAATGTTCACCGAACCCGCGGAC
CAGAGCGTGTGGTGGTACCACCACTTCCTCCTCACGTGGGCCGAAGAGGG
CGCCACCAGCTGCGACATGGGCCGATATGAGAACTTTCTTCGCGCCGAGG
CGGCCACTCTTGAGGAGCTGATCGAGGTGGAGGGTCGGTGCAAGTGGGCC
GAGCTTGCGCTACTCCTGGTGTCCCAACGGCTCGCCAACGCTCTCGAACC
ACCACAACAGCCTCCCGGAGCGGAGGCAGGTGATAGTAGCGGTACTAGCA
GTGGCGAGGCTTCAACCGGCGGGGACGCCGACGAAGCTGCGAAGGTCCGG
ACGAGCTGCCGTAGCATGGCGGCACGGTTATCGGAGCTCGATCCGATGCA
CCGCCGTTTCTACGAGTTCGTTGAGCGGGGCGGGTCAGTGTTTGGGGAGC
ACGTGGGAGGGGCCGCCGGCGAGACGTAGTGGGCCGAGCTTGCGCTACTC
CTGGTGTCCCAACGGCTCGCCAACGCTCTCGAACCACCACAACAGCCTCC
CGGAGCGGAGGCAGGTGATAGTAGCGGTACTAGCAGTGGCGAGGCTTCAA
CCGGCGGGGACGCCGACGAAGCTGCGAAGGTCCGGACGAGCTGCCGTAGC
ATGGCGGCACGGTTATCGGAGCTCGATCCGATGCACCGCCGTTTCTACGA
GTTCGTTGAGCGGGGCGGGTCAGTGTTTGGGGAGCACGTGGGAGGGGCCG
CCGGCGAGACGTAG
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