prot_L-elsbetiae_contig15832.4053.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15832.4053.1
Unique Nameprot_L-elsbetiae_contig15832.4053.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
BLAST of mRNA_L-elsbetiae_contig15832.4053.1 vs. uniprot
Match: A0A6H5JGM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM7_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 3.540e-43
Identity = 64/119 (53.78%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    5 RAACGKALHGKQVPGVG-LPLCFACGRPGSRDGCMKKWRHVGSTPLWGDLGVWSSTAVAGDAWVHERDLQADPLQVGECICCRPDCVGTMYDNFKLRHRKEGEGSMLKMVVGQSSPMGR 122
            RA+CGK +HGK+    G L  CFAC RPGSRDGC   W+HV  +  W +LG WS+T   G+ W HERDL  DPL+ GECIC R DCV  +Y  +K R ++E +G++  MV+GQ SPMGR
Sbjct:    6 RASCGKVVHGKEPAAAGELRRCFACDRPGSRDGCSTNWQHVVDSEYWAELGEWSATV--GEGWTHERDLVGDPLKAGECICRRADCVVNLYQRYKGRRQREEKGALHTMVIGQRSPMGR 122          
BLAST of mRNA_L-elsbetiae_contig15832.4053.1 vs. uniprot
Match: A0A6H5KE39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE39_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 6.070e-41
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0
Query:    3 GIRAACGKALHGKQVPGVGLPLCFACGRPGSRDGCMKKWRHVGSTPLWGDLGVWSSTAVAGDAWVHERDLQADPLQVGECICCRPDCVG 91
            G   +CG+A+HGK+ PG GL LCFACGRPGSRDGC  +W+HVG T  W ++G WS  A+ G  W HERDLQ DPL+VGECIC RPDC G
Sbjct:    4 GFLGSCGRAVHGKEAPGGGLGLCFACGRPGSRDGCSSRWKHVGQTTYWAEVGEWS--AMVGQEWPHERDLQGDPLKVGECICTRPDCAG 90          
BLAST of mRNA_L-elsbetiae_contig15832.4053.1 vs. uniprot
Match: D7FTC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC1_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.760e-22
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   10 KALHGKQVPGVGLPLCFACGRPGSRDGCMKKWRHVGSTPLWGDLGVWSSTAVAGDAWVHERDLQADPLQVGECICCRPDCVGTMY 94
            +A+HGK+ PG G  LCFACGRPGSRDGC  +W+HVG    W +LG WS  A+ G+ W HERD             CRP   G ++
Sbjct:    7 RAVHGKEAPGGGPGLCFACGRPGSRDGCSSRWKHVGQGTYWAELGEWS--AIVGEEWPHERDT------------CRPSQSGRVH 77          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15832.4053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGM7_9PHAE3.540e-4353.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE39_9PHAE6.070e-4164.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTC1_ECTSI1.760e-2248.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15832contigL-elsbetiae_contig15832:2004..2396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15832.4053.1mRNA_L-elsbetiae_contig15832.4053.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15832 1656..2401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15832.4053.1 ID=prot_L-elsbetiae_contig15832.4053.1|Name=mRNA_L-elsbetiae_contig15832.4053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MGGIRAACGKALHGKQVPGVGLPLCFACGRPGSRDGCMKKWRHVGSTPLW
GDLGVWSSTAVAGDAWVHERDLQADPLQVGECICCRPDCVGTMYDNFKLR
HRKEGEGSMLKMVVGQSSPMGRYPSTGSQV*
back to top