Homology
BLAST of mRNA_L-elsbetiae_contig10392.404.1 vs. uniprot
Match:
D8LKD7_ECTSI (ACB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD7_ECTSI)
HSP 1 Score: 211 bits (538), Expect = 5.020e-63
Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = 1
Query: 241 LLASSGSWSEAPDDQALTKKFRVSLMFYTKELMANAKQYGEGDKLALYGLFKQAKWGDCPAGLVSAQRDNPVGSVKVRAWVTNRGKPTSQAMEEFIAVLGRVSPGWESRVLRPSSSD 591
+LAS+GSWSEAPDD ALTKKFRVSLMFYTKELMANA+QYGE DKLALYGLFKQAKWGDCP GLV+AQR NPVGSVKVRAWVTNRGKPT+QAM+EFI VLGRVSPGWESRV+ +SD
Sbjct: 86 MLASTGSWSEAPDDLALTKKFRVSLMFYTKELMANARQYGEADKLALYGLFKQAKWGDCPDGLVTAQRGNPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVISGNSD 202
BLAST of mRNA_L-elsbetiae_contig10392.404.1 vs. uniprot
Match:
A0A6H5LAN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN0_9PHAE)
HSP 1 Score: 209 bits (533), Expect = 4.270e-57
Identity = 99/120 (82.50%), Postives = 110/120 (91.67%), Query Frame = 1
Query: 232 SKILLASSGSWSEAPDDQALTKKFRVSLMFYTKELMANAKQYGEGDKLALYGLFKQAKWGDCPAGLVSAQRDNPVGSVKVRAWVTNRGKPTSQAMEEFIAVLGRVSPGWESRVLRPSSSD 591
S +L S+GSWSEAPDD ALTKKFRVSLMFYTKELM+NA+QYGE DKLALYGLFKQAKWGDCPAG+V+AQR +PVGSVKVRAWVTNRGKPT+QAM+EFI VLGRVSPGWESRV+ +SD
Sbjct: 1726 SSSMLPSTGSWSEAPDDVALTKKFRVSLMFYTKELMSNARQYGEADKLALYGLFKQAKWGDCPAGMVAAQRGDPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVMSGNSD 1845
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10392.404.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 5.02e-63 / Id = 86.32 Expect = 4.27e-57 / Id = 82.50 Sequence D8LKD7_ECTSI A0A6H5LAN0_9PHAE
Match Name E-value Identity Description
D8LKD7_ECTSI 5.020e-63 86.32 ACB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LAN0_9PHAE 4.270e-57 82.50 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation
Ec32 ortholog description Acyl-CoA-binding protein, ACBP
Ec32 ortholog Ec-05_001140.1
Exons 4
Model size 1001
Cds size 999
Stop 0
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815265.154141-CDS-L-elsbetiae_contig10392:576..1032 1622815265.154141-CDS-L-elsbetiae_contig10392:576..1032 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 577..1032 -
1691682805.155693-CDS-L-elsbetiae_contig10392:576..1032 1691682805.155693-CDS-L-elsbetiae_contig10392:576..1032 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 577..1032 -
1622815265.1669788-CDS-L-elsbetiae_contig10392:1974..2187 1622815265.1669788-CDS-L-elsbetiae_contig10392:1974..2187 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 1975..2187 -
1691682805.1728103-CDS-L-elsbetiae_contig10392:1974..2187 1691682805.1728103-CDS-L-elsbetiae_contig10392:1974..2187 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 1975..2187 -
1622815265.1849382-CDS-L-elsbetiae_contig10392:3239..3523 1622815265.1849382-CDS-L-elsbetiae_contig10392:3239..3523 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 3240..3523 -
1691682805.1846364-CDS-L-elsbetiae_contig10392:3239..3523 1691682805.1846364-CDS-L-elsbetiae_contig10392:3239..3523 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 3240..3523 -
1622815265.1945825-CDS-L-elsbetiae_contig10392:3646..3692 1622815265.1945825-CDS-L-elsbetiae_contig10392:3646..3692 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 3647..3692 -
1691682805.201628-CDS-L-elsbetiae_contig10392:3646..3692 1691682805.201628-CDS-L-elsbetiae_contig10392:3646..3692 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig10392 3647..3692 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10392.404.1
>prot_L-elsbetiae_contig10392.404.1 ID=prot_L-elsbetiae_contig10392.404.1|Name=mRNA_L-elsbetiae_contig10392.404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
TTKSAAPTAAAAAAAVAEAAAAAAAAAVAASGQAAEGAAGGAGGGVRGAG AASSGARAGAGGKAASGAGAAAGAAAGSKILLASSGSWSEAPDDQALTKK FRVSLMFYTKELMANAKQYGEGDKLALYGLFKQAKWGDCPAGLVSAQRDN PVGSVKVRAWVTNRGKPTSQAMEEFIAVLGRVSPGWESRVLRPSSSDGAS THPKTTVAATRGTPRRPSSTFSSASSTTLSSSPSAATATAASTATAAAAA AAVAASPLAMPASSAEAVGGGPLRPLARVTSAGSSGMSSPEELSRLPVSR TNGASAARGQKHHGRRGDVGTVVPASGSAAAAA back to top mRNA from alignment at L-elsbetiae_contig10392:575..3692-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10392.404.1 ID=mRNA_L-elsbetiae_contig10392.404.1|Name=mRNA_L-elsbetiae_contig10392.404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3118bp|location=Sequence derived from alignment at L-elsbetiae_contig10392:575..3692- (Laminarionema elsbetiae ELsaHSoW15)ACCACCAAGTCTGCTGCCCCAACCGCCGCCGCAGCGGCCGCGGCGG GTTT
GTCGCCGCCAGGGCGGCCCGCCGCCGCCGTGGCCTCCTCCGACCTCCTGG
ACAGCGCGCTGACCGCGCCGCCGGACAACGGCCCCCGGCCGGGATCGGGG
AAGTGGCCGGGCCTGACAGTAGCGGAGGCGGCAGCGGCGGCGGCCGCGGC
GGCGGTGGCGGCATCTGGCCAGGCGGCCGAGGGGGCAGCCGGTGGTGCCG
GCGGCGGTGTGAGAGGGGCGGGGGCGGCCTCGTCGGGGGCGCGGGCCGGC
GCCGGCGGCAAGGCGGCGTCCGGCGCCGGGGCCGCGGCGGGAGCCGCGGC
TGGAAGCAAGATACTGCTCGCGTCGTCTGGCAGCTGGTCGGAGGCTCCGG
ACGACCAGGCGCTCACCAAAAAGTTCAGGGTTTCCCTCATGTTCTACACC
AAG GTGCGTAGGTTGCTTGGTTAGTTTGTTTCGACGGCTCGGTTTGTCTT
TTGTTGGTGTTTGTTTGTCGAAGATTTTTTTCCCGAAACTCTGACACATG
ACGTCATTGCTGCATATACGAACATGTGTGACCCCGGTTGGGGTCGTGTA
AATGGCTAAAAAGTCGTAGTGGAGGAAGGGGGCCAGTGGGGCACACGGCG
AATAAGCCAACATTGGGAGGAGAAAAATAAAATTAAATAAAGAAACACGC
ACGGCGTTGCAAGCGTCCTTGGCGTGTCGGAAGGCCTGCATGCCTACTAT
TTAGCGGCGGCGCTAGCAGGCCGCTTGCAACCATACCGCCCGTGGCGAAG
TTGAGGGCTTCCCTCGCTCACCGTTGTATTTTACCTATAGAGGCTTCGGA
GGTTGGCTCGCGATCAATCATCCCCAGAGTTCGCAGGCTATCTACGGTGA
ACCTCGTGTGTGTGTGTGTGCGTGTGTGCGTTTGAGGAGGCCGTCGATGG
CCAGCACCAGTACTGCATGTCGAAAAGTCCATTACTTCTACTCTGCTGTA
CCCCGAGAATATGTCGACCCTCGTGGGCCCTTCCATTTAAGTGTACCTTT
TTTCAGGTGTAAGTTCTGCAGCCCCTTAACCACGGGATCGACCGCGTCAT
CGGTTGGATGAGTAGGGACGGATACACGGAGCCCCTGAGGAGAGACGTCG
GGAAGAAAAAAAAACACACACACACTTCGCGTCAAGACAGACGTTCGGGA
ACCACGAGTCGCGGGAATCAGGAAACAATAAAGGTGTCGGGGAGGGAATC
GCTCTCTCCCACCCAACTCTCTTAAACTCACTTTTGAGGCGCTTTTCTTA
TCCCCGAATTTTTGTATTTTCTTCAGCGGCGTCGAGTGTGTGCCCTATTC
TGTCACCACGGGGCCCCGCGGAGGTATCGGCCCGAAGTAGAGAAGACATG
TGAGGACCACACCACCAAAAAGAGCACCAACCGATAGCACCAATAATAAG
AACGACGACACCCTCCCCCCCCCCCACCCTCTCCCTGTCATCCAACGCAC
CACAGGAGCTCATGGCCAACGCCAAGCAGTACGGGGAAGGGGACAAGCTG
GCCCTCTACGGGCTGTTCAAGCAGGCCAAGTGGGGAGACTGCCCCGCCGG
CCTGGTGTCGGCGCAGAGGGACAACCCGGTGGGCTCGGTCAAGGTCCGCG
CGTGGGTGACGAATCGCGGGAAGCCCACTTCCCAGGCCATGGAGGAGTTT
ATCGCCGTGCTTGGAAGG GTAAGTGCACTCTTCTGGGACAAGCGGGGGGT
TACGCCGAAGTGGCGGTCGGGGGGGGGGGTTGTCGGCTGTTTTTATTTTT
TATTTTTTATTTTGAGGGTGTGTGTGTGTGTGTATTGTTTGGTCTTCAAA
GAAAAACAGTTATTGAATCAAAAATGGAACCTGACCCACATTGACCCGGA
ACTCCGTGAGATTCAATCTTCTTCTCTGAGTGCCCCCCCCCCCCCCCGAG
CTTTTTGGGTGTAACCGTAATCGTCTCTGATTTCCGGTTTTCCCCGGCGG
GCGGGGAACGAAATTTGCAGTCTCTTTTTCTATATGTAGCGGCGAGGGTG
CTATTTGTCGCCGAGCGATGCGCTGTTGTTTTTTCTTCTTTTTTTTCTCC
AGTGCTGGATGGGCTCCTTGCCACGCGGGGCATCTTGCCAGAGTATTGAC
CCGTGGTGGCACAGAAGAGCCCCTCTCCCCGAGGCCCCCCACTCCCACCT
TCTACGGTGCTTGCCTAAGATTTGTTATCGCGAGAAGGGTTCAGCCCGTC
CCTTTCCCTTTTGTCGACGGTGAGGTCGAAGACTGTGGCTCGCTAAATAA
ATGCGAATGAAGATTGTTCGTGCGCCGGCCTCTATTACAGTTGTGGTAGG
TAGATCCGTTACGTAAGTCCCTGCGGTGTTTGTTTAATTAATGTGTGTTG
TTCCTTCACATTTAAAACAGTTCCGATCTCTCCACCCAGTACTTCCCTAT
GGGCATACTATTCCAACACTTGATGCGGTCAATTCCCGTGGCCACAGGGT
AACTTACACCTAAAAAAGGAATACGAAAATAAAATGGACCCGAAGGGTCA
GCAAAGCGATAAAAATCAAAGATAAATACGTGTTTTTTGTGCATTTTTGA
GATGATGTGCATACATACACAGCTTTGACCCGCCATACATCTCTCGTCAC
GAAACCGCAGGTATCCCCCGGCTGGGAGTCACGAGTGTTGCGTCCGTCCA
GCAGCGACGGAGCCTCCACCCACCCGAAGACCACCGTGGCCGCCACCCGC
GGAACCCCCAGGCGTCCCTCCAGCACGTTCTCTTCCGCCAGCTCCACCAC
CCTGTCCTCCTCTCCTTCCGCCGCTACCGCTACCGCGGCGTCTACCGCTA
CCGCTGCTGCCGCTGCCGCCGCCGTCGCGGCGTCCCCTCTGGCGATGCCG
GCTTCTTCCGCGGAGGCGGTGGGGGGCGGTCCTCTACGCCCCCTCGCCCG
CGTGACGAGCGCCGGTTCTTCGGGGATGTCGTCGCCGGAGGAGCTCTCGC
GGTTGCCAGTTTCGCGCACGAACGGGGCGTCGGCGGCGCGGGGGCAGAAG
CACCACGGCAGACGGGGGGATGTAGGCACGGTCGTTCCCGCGAGCGGGTC
GGCAGCGGCGGCGGCG GC back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10392:575..3692-
>mRNA_L-elsbetiae_contig10392.404.1 ID=mRNA_L-elsbetiae_contig10392.404.1|Name=mRNA_L-elsbetiae_contig10392.404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig10392:575..3692- (Laminarionema elsbetiae ELsaHSoW15) ACCACCAAGTCTGCTGCCCCAACCGCCGCCGCAGCGGCCGCGGCGGACCA CCAAGTCTGCTGCCCCAACCGCCGCCGCAGCGGCCGCGGCGGTAGCGGAG GCGGCAGCGGCGGCGGCCGCGGCGGCGGTGGCGGCATCTGGCCAGGCGGC CGAGGGGGCAGCCGGTGGTGCCGGCGGCGGTGTGAGAGGGGCGGGGGCGG CCTCGTCGGGGGCGCGGGCCGGCGCCGGCGGCAAGGCGGCGTCCGGCGCC GGGGCCGCGGCGGGAGCCGCGGCTGGAAGCAAGATACTGCTCGCGTCGTC TGGCAGCTGGTCGGAGGCTCCGGACGACCAGGCGCTCACCAAAAAGTTCA GGGTTTCCCTCATGTTCTACACCAAGTAGCGGAGGCGGCAGCGGCGGCGG CCGCGGCGGCGGTGGCGGCATCTGGCCAGGCGGCCGAGGGGGCAGCCGGT GGTGCCGGCGGCGGTGTGAGAGGGGCGGGGGCGGCCTCGTCGGGGGCGCG GGCCGGCGCCGGCGGCAAGGCGGCGTCCGGCGCCGGGGCCGCGGCGGGAG CCGCGGCTGGAAGCAAGATACTGCTCGCGTCGTCTGGCAGCTGGTCGGAG GCTCCGGACGACCAGGCGCTCACCAAAAAGTTCAGGGTTTCCCTCATGTT CTACACCAAGGAGCTCATGGCCAACGCCAAGCAGTACGGGGAAGGGGACA AGCTGGCCCTCTACGGGCTGTTCAAGCAGGCCAAGTGGGGAGACTGCCCC GCCGGCCTGGTGTCGGCGCAGAGGGACAACCCGGTGGGCTCGGTCAAGGT CCGCGCGTGGGTGACGAATCGCGGGAAGCCCACTTCCCAGGCCATGGAGG AGTTTATCGCCGTGCTTGGAAGGGAGCTCATGGCCAACGCCAAGCAGTAC GGGGAAGGGGACAAGCTGGCCCTCTACGGGCTGTTCAAGCAGGCCAAGTG GGGAGACTGCCCCGCCGGCCTGGTGTCGGCGCAGAGGGACAACCCGGTGG GCTCGGTCAAGGTCCGCGCGTGGGTGACGAATCGCGGGAAGCCCACTTCC CAGGCCATGGAGGAGTTTATCGCCGTGCTTGGAAGGGTATCCCCCGGCTG GGAGTCACGAGTGTTGCGTCCGTCCAGCAGCGACGGAGCCTCCACCCACC CGAAGACCACCGTGGCCGCCACCCGCGGAACCCCCAGGCGTCCCTCCAGC ACGTTCTCTTCCGCCAGCTCCACCACCCTGTCCTCCTCTCCTTCCGCCGC TACCGCTACCGCGGCGTCTACCGCTACCGCTGCTGCCGCTGCCGCCGCCG TCGCGGCGTCCCCTCTGGCGATGCCGGCTTCTTCCGCGGAGGCGGTGGGG GGCGGTCCTCTACGCCCCCTCGCCCGCGTGACGAGCGCCGGTTCTTCGGG GATGTCGTCGCCGGAGGAGCTCTCGCGGTTGCCAGTTTCGCGCACGAACG GGGCGTCGGCGGCGCGGGGGCAGAAGCACCACGGCAGACGGGGGGATGTA GGCACGGTCGTTCCCGCGAGCGGGTCGGCAGCGGCGGCGGCGGTATCCCC CGGCTGGGAGTCACGAGTGTTGCGTCCGTCCAGCAGCGACGGAGCCTCCA CCCACCCGAAGACCACCGTGGCCGCCACCCGCGGAACCCCCAGGCGTCCC TCCAGCACGTTCTCTTCCGCCAGCTCCACCACCCTGTCCTCCTCTCCTTC CGCCGCTACCGCTACCGCGGCGTCTACCGCTACCGCTGCTGCCGCTGCCG CCGCCGTCGCGGCGTCCCCTCTGGCGATGCCGGCTTCTTCCGCGGAGGCG GTGGGGGGCGGTCCTCTACGCCCCCTCGCCCGCGTGACGAGCGCCGGTTC TTCGGGGATGTCGTCGCCGGAGGAGCTCTCGCGGTTGCCAGTTTCGCGCA CGAACGGGGCGTCGGCGGCGCGGGGGCAGAAGCACCACGGCAGACGGGGG GATGTAGGCACGGTCGTTCCCGCGAGCGGGTCGGCAGCGGCGGCGGCG back to top