mRNA_L-elsbetiae_contig15794.4035.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.870e-24 Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 1 ASELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLIDEGNI--AGLEACDDGS--SLDPDAEAG 276 A+ELWAFSA+ILPWI+ CD AV VR N+++ +APM DG+ A K +LE VYSCMGITCAQVGGL+D+ E CDDGS S+D +++G Sbjct: 1402 AAELWAFSASILPWISACDAAVGTAVRDNTELGSASAPMADGYAAIKTQLETVYSCMGITCAQVGGLLDDTGAYYTDFEPCDDGSLASIDRSSDSG 1497
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 103 bits (258), Expect = 5.950e-24 Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 1 ASELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLIDEGNI--AGLEACDDGSS 252 A+ELWAFSAAILPWI+ CD AV TVR N+++ +APM DG+ A K +LE VYSCMGITCAQVGGL+D+ E CDD ++ Sbjct: 92 AAELWAFSAAILPWISACDAAVGTTVRDNTELGSASAPMADGYAAIKVQLESVYSCMGITCAQVGGLLDDTGAYYTDFEPCDDSTT 177
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 3.330e-19 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 1 ASELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLIDEGNIA---GLEACDDGSS 252 A+ELWAFSAA+LP I ECD VA VRAN+D++ APM++G+V K +LE VYSCMGI+C+QVGGL+ + G E C D S Sbjct: 293 AAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQVGGLVIGESTTYYDGFEPCGDSDS 379
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 1.620e-18 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLIDEGN----IAGLEAC 237 +ELWAF+AAILP I EC VA TVR+NSD+ AP++ GFVA K ELE +YSC+G+TC QVGGL+ + + GLE C Sbjct: 656 AELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPC 737
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.030e-17 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLIDEGN---IAGLEACDD 243 +ELWAFSAA+LP IAECD VA +R NS + K PM DG+VA K LE YSC+G C+ VGG+ID G I+G+E C+D Sbjct: 524 AELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVKEALETTYSCLGFMCSDVGGIIDGGAGNYISGMEPCED 604
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: D8LDE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE2_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.570e-17 Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLI 204 +ELWAF+AAILP I EC VA TVR+NSD+ AP++ G VA K ELE +YSC+G+TC QV GL+ Sbjct: 119 AELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGLVAVKKELESIYSCLGMTCDQVVGLL 185
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: A0A7S2XA87_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XA87_9EUKA) HSP 1 Score: 80.5 bits (197), Expect = 9.650e-16 Identity = 42/85 (49.41%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLID--EGNIAGLEACDDGSS 252 +E WAF+ A+LP I C+P VA +R N P PM DG+ K + E VYSCMGITC VGGL++ EG G+E C D SS Sbjct: 282 AEGWAFAIAVLPQINRCNPTVAAEIRENLQYPNPQGPMVDGYRYVKQQFESVYSCMGITCDSVGGLLNGNEGYFDGMEPCRDPSS 366
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: A0A7S1TU13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.990e-14 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLI---DEGNI---AGLEACDD 243 +E WAF++A+LP I CD VA +RAN + +P+ DG+ A AE++KVYSC+GITCA VGG + +G I +G E CDD Sbjct: 207 AEGWAFTSAVLPQIDACDAGVASMIRANMEYGV-ASPVADGYAAVYAEMQKVYSCLGITCADVGGYVASVTDGTITYVSGTEPCDD 291
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: A0A7S3JU19_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU19_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 7.860e-13 Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRAN----SDMSKPTAPMTDGFVAAKAELEKVYSCMGITCAQVGGLIDE--GNIAGLEACDDGSSLDPDA 267 +E AF+ AILP +A CD A + AN SD++ + DGF A K+ E YSC+ ITC+ +GGL D G I+G+E+C+DGSS++ D+ Sbjct: 560 AEFVAFAEAILPRVAHCDANAAAVIAANTVIPSDLNN---AIPDGFAAVKSAFESTYSCLSITCSDIGGLSDGNGGFISGMESCEDGSSVEDDS 650
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Match: F0XWA3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWA3_AURAN) HSP 1 Score: 72.4 bits (176), Expect = 7.920e-13 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 4 SELWAFSAAILPWIAECDPAVAETVRAN----SDMSKPTAP--MTDGFVAAKAELEKVYSCMGITCAQVGG-LIDEGN-IAGLEACDDGSSLDPDAE 270 +E AF+ A LP +A CD A E + A+ +++++ +A + GF A KA LE YSC+GITCA VGG LI +G +AG+EACDDGS+++ AE Sbjct: 1061 AEYHAFAYAALPRVAHCDAAAGEVLAASMAIPTELTEASAATVVPGGFAAVKAALESTYSCLGITCADVGGPLIHDGAPVAGMEACDDGSTVNTRAE 1157 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15794.4035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15794.4035.1 >prot_L-elsbetiae_contig15794.4035.1 ID=prot_L-elsbetiae_contig15794.4035.1|Name=mRNA_L-elsbetiae_contig15794.4035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp ASELWAFSAAILPWIAECDPAVAETVRANSDMSKPTAPMTDGFVAAKAELback to top mRNA from alignment at L-elsbetiae_contig15794:829..1104+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15794.4035.1 ID=mRNA_L-elsbetiae_contig15794.4035.1|Name=mRNA_L-elsbetiae_contig15794.4035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=276bp|location=Sequence derived from alignment at L-elsbetiae_contig15794:829..1104+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15794:829..1104+ >mRNA_L-elsbetiae_contig15794.4035.1 ID=mRNA_L-elsbetiae_contig15794.4035.1|Name=mRNA_L-elsbetiae_contig15794.4035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig15794:829..1104+ (Laminarionema elsbetiae ELsaHSoW15)back to top |