mRNA_L-elsbetiae_contig15765.4022.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: D7FYA9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA9_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.060e-67 Identity = 107/121 (88.43%), Postives = 117/121 (96.69%), Query Frame = 1 Query: 79 MCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 MCPRLGDAYARSEAVLDVRADV+FSRLRKV K+GLETLDASGGRLGFLP+EIRERPEMACLT++NLSRNQLFNSDHVFGIL L++L+KLDLTDNFFNGVLSA AG+LRELEELRLDVNQ+ Sbjct: 1 MCPRLGDAYARSEAVLDVRADVVFSRLRKVVKYGLETLDASGGRLGFLPDEIRERPEMACLTNLNLSRNQLFNSDHVFGILLGLKNLKKLDLTDNFFNGVLSAAAGRLRELEELRLDVNQI 121
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: A0A7S3YCW6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCW6_HETAK) HSP 1 Score: 152 bits (384), Expect = 1.370e-41 Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 1 Query: 34 VVVTTRFIEAERLRCMCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 V TT +I AER R MCPRLGD Y R + +++ DV+ ++ K A +G TLD SGG LGFLP+E+R RPE+ +T++NL++NQLFNSDHVFG++S LE +R L+L+DNF NG LS + G + ELRLD NQ+ Sbjct: 21 VPTTTPYIVAERERAMCPRLGDNYVRVQNSDEIKKDVVQWKIEKAAMNGASTLDISGGNLGFLPQELRTRPELQSITEINLAKNQLFNSDHVFGVVSALERIRVLNLSDNFLNGQLSDSVGLCISIRELRLDSNQL 156
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: A0A836C9T9_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T9_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.720e-36 Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 79 MCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 MCPRLGD Y +A +VRAD +F RLR+ +TL + G LG LP+EIR RPE+ L +++LSRNQLFNS+ VFG+L LE L+KLDL+DNFFNGVLS AG L +L+ + LD N + Sbjct: 1 MCPRLGDVYKNEQAADEVRADRMFFRLRRAIHESTDTLSLANGNLGSLPDEIRTRPELQNLKELDLSRNQLFNSNQVFGVLQSLEQLQKLDLSDNFFNGVLSPAAGLLTQLQNISLDNNHI 121
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: F0Y819_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y819_AURAN) HSP 1 Score: 133 bits (334), Expect = 2.680e-34 Identity = 70/135 (51.85%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 37 VVTTRFIEAERLRCMCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 VVTTR I ER RCMCPRLGDA RSE +R + +F ++R+ G ETLD S LGF+PEE+R PE+ LT+++LSRNQLF SDHVF L+DNFFNG LS K+ LE+L LD NQ+ Sbjct: 21 VVTTRTIIRERERCMCPRLGDAAVRSERADAIRLECVFFKIRRAVVQGKETLDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDHVFSXXXXXXXXXXXXLSDNFFNGPLSERCTKMVALEDLALDGNQL 155
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: A0A8J2SS54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS54_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.160e-32 Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 4 KKGKKSAPERVVVTTRFIEAERLRCMCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 KKGK A +VTTR + ER RCMCPRLGDA R E +++ + + +R++KV + + LD S LGF+P+E+ P + L V+LSRNQLF+SDHVF L + SL+ L+L NF NG L+ A + LEEL LD NQ+ Sbjct: 6 KKGKGGADADAIVTTRAMLVERERCMCPRLGDAIERRERANEIKRECVQARIKKVGEFKRDYLDMSASGLGFVPDEVPRSPSLTRLVRVDLSRNQLFSSDHVFQSLEHITSLKILNLAHNFLNGPLTGRATDVTSLEELYLDHNQL 151
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: A0A7S1U9P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9P1_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.940e-30 Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = 1 Query: 1 KKKGKKSAPERVVVTTRFIEAERLRCMCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 K KGK +AP ++TT I R C+CPRLGD+ E D R DVI+ R+ K A+ G L+ S L FLPE+I PE+ + ++LS N+LFNSDHVF IL+ L L+KL+L+ N +G LS A ++ LEELRLD N++ Sbjct: 3 KGKGKAAAP---ILTTPAIIKARQTCLCPRLGDSLRNMEIADDCRMDVIYWRMNKAAERGHNALNLSHAALDFLPEDIIHIPELVGVVSLDLSYNRLFNSDHVFEILTHLPLLKKLNLSHNRLHGALSVAACRIETLEELRLDSNEL 146
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: A0A7S2S4U1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4U1_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.160e-10 Identity = 53/158 (33.54%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 7 KGKKSAPERVVVTTRFIEAER---LRCMCPRLGDAYARSEAVLDVRADVIFSRLRKVAKHGLETLDASGGRLGFLPEEIRERPEMAC---------LTDVNLSRNQLFNSDHVFGILSCLE-SLRKLDLTDNFFNGVLSATAGKLRELEELRLDVNQV 441 KG + + VV+ T +A ++ C LG Y+ ++R +V SRLR V E LD G LG +PEE+ + LT ++LS+N L +DHVF L+CL +L KL+++ N +G L TA L LEEL N + Sbjct: 28 KGSAAELDPVVIVTSAQQARERSHIQRECIPLGRRYSVLCRAQEIRREVAESRLRAVYSRSAECLDLRGLDLGHVPEELAALSRLEADIEPAGWNGLTALDLSKNSLNTTDHVFQALACLGGTLLKLNVSANELSGPLPDTARALTHLEELDASRNHI 185
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Match: F0YRJ7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRJ7_AURAN) HSP 1 Score: 53.9 bits (128), Expect = 1.150e-5 Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 1 Query: 190 LDASGGRLGFLPEEIRERPEMACLTDVNLSRNQLFNSDHVFGILSCLESL 339 LD S LGF+PEE+R PE+ LT+++LSRNQLF SDH + LE L Sbjct: 1 LDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDHRCTKMVALEDL 50 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15765.4022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15765.4022.1 >prot_L-elsbetiae_contig15765.4022.1 ID=prot_L-elsbetiae_contig15765.4022.1|Name=mRNA_L-elsbetiae_contig15765.4022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp KKKGKKSAPERVVVTTRFIEAERLRCMCPRLGDAYARSEAVLDVRADVIFback to top mRNA from alignment at L-elsbetiae_contig15765:2321..3648+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15765.4022.1 ID=mRNA_L-elsbetiae_contig15765.4022.1|Name=mRNA_L-elsbetiae_contig15765.4022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1328bp|location=Sequence derived from alignment at L-elsbetiae_contig15765:2321..3648+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15765:2321..3648+ >mRNA_L-elsbetiae_contig15765.4022.1 ID=mRNA_L-elsbetiae_contig15765.4022.1|Name=mRNA_L-elsbetiae_contig15765.4022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig15765:2321..3648+ (Laminarionema elsbetiae ELsaHSoW15)back to top |