mRNA_L-elsbetiae_contig15720.3998.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI) HSP 1 Score: 503 bits (1294), Expect = 2.950e-165 Identity = 277/540 (51.30%), Postives = 351/540 (65.00%), Query Frame = 1 Query: 1 MCHRWIQEGATRIAVRSAANPNNFDHFCSTCKRSEPQLVRRGEHDHQGTVGNLGVSGRASGAGIAPSRSATAASSYSRPPVVSGEVCLSPREVAAAFLAKIPHAPMVSPRENPEARAREALKPTKA---MKDKAAREGRDLGQLARTAAMATFATMNARIAIFVHEVETPA-RLGVRMICPSCRTNKFVLPPGAKNNGFSSMFSQKVRVVHDVDGVVVLLAGKYRCKNPECALVKASARSKAEKEEKKEGGQKATDVVWDDAAVSSRCPDGVSFIAADERYMKILPPAVREQLPYHFFKQQGATSLKLLEMVRATGGDMQGFHRMLLARDQGQGIRDCNRYVRFAKMEQANESKSRVDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNVLRELLGLRGGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDYFPALKRAPLADAFHSIQTLTGATTTKDHPHKAHYSKEMGGGIR 1608 MC R G R AVRSA NP FDHFCSTC RSE QL RRG H+ GT+ + S G +S + P SP VAAAF K P AP+ +P E EARAR A+ PT A M A G D+G+L R AAMA FAT++ +A++VHEV+T +GVRMICPSC TN+FV PG NGF S+ SQK+RV HD+ GVVV + GKYRCKNP CAL SAR AEK EK GG KA+++VWDDAAV+S C +GV+F D RYM++LP AV +LPY FFKQ TS +LL+MV AT GD GFHR+L+ARDQGQ +RD RY+RFA+ EQA E +SR+D FT WP W+ N TL S PSVAVLN I++ H++++D++LREL+ G + +D +FR AGK + + ++ + GE+ KI YGAVKSES+EE LL QRYAD RR T + YDDRCC +D TK++ FP ++RAPLAD+FH+ Q L GATT+K H + Y++ +GG +R Sbjct: 1 MCFRTQNPGDLRTAVRSAENPTKFDHFCSTCWRSEEQLERRGAHNSHGTLEDRAASQATGGXXXXXXXXXXTGNSKGKGPAARHP---SPAAVAAAFREKFPQAPLCTPVEGVEARARVAMHPTAATAAMSRAATDGGADMGELLREAAMAAFATIHVAVALYVHEVKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVHVFGKYRCKNPACALNVRSARKSAEKAEKN-GGPKASEIVWDDAAVTSHCKNGVAFNTMDTRYMQLLPAAVVAKLPYRFFKQN-ITSERLLDMVSATEGDTPGFHRLLVARDQGQELRDMQRYIRFAEEEQARERRSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRGCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVR 535
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 4.480e-143 Identity = 243/452 (53.76%), Postives = 312/452 (69.03%), Query Frame = 1 Query: 265 SPREVAAAFLAKIPHAPMVSPRENPEARAREALKPTKA---MKDKAAREGRDLGQLARTAAMATFATMNARIAIFVHEVETPA-RLGVRMICPSCRTNKFVLPPGAKNNGFSSMFSQKVRVVHDVDGVVVLLAGKYRCKNPECALVKASARSKAEKEEKKEGGQKATDVVWDDAAVSSRCPDGVSFIAADERYMKILPPAVREQLPYHFFKQQGATSLKLLEMVRATGGDMQGFHRMLLARDQGQGIRDCNRYVRFAKMEQANESKSRVDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNVLRELLGLRGGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDYFPALKRAPLADAFHSIQTLTGATTTKDHPHKAHYSKEMGGGIR 1608 SP VAAAF K P AP+ +P E EARAR A+ PT A M A G D+G+L R AAMA FAT++ +A++VHEV+T +GVRMICPSC TN+FV PG NGF S+ SQK+RV HD+ GVVV + GKYRCKNP CAL SAR AEK EK GG KA+++VWDDAAV+S C +GVSF D RYM++LP AV +LPY FFKQ G TS +LL+MV AT GD GFHR+L+AR+QGQ +RD RY+RFA+ EQA E +SR+D FT WP W+ N TL S PSVAVLN I++ H++++D++LREL+ G + +D +FR AGK + + ++ + GE+ KI YGAVKSES+EE LL QRYAD RR T + YDDRCC +D TK++ FP ++RAPLAD+FH+ Q L GATT+K H + Y++ +GG +R Sbjct: 188 SPAAVAAAFREKFPQAPLCTPVEGVEARARAAMHPTAATAAMSRAATDGGADMGELLREAAMAAFATIHVAVALYVHEVKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVPVFGKYRCKNPACALNVRSARQSAEKAEKN-GGPKASEIVWDDAAVTSHCKNGVSFNTMDTRYMQLLPAAVVAKLPYRFFKQNG-TSERLLDMVSATEGDTPGFHRLLVAREQGQELRDMQRYIRFAEEEQARERRSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMNEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRVCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVR 637
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5JZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ63_9PHAE) HSP 1 Score: 171 bits (434), Expect = 7.020e-44 Identity = 145/467 (31.05%), Postives = 212/467 (45.40%), Query Frame = 1 Query: 262 LSPREVAAAFLAKIPHAPMVSPRENPEARAREALKPTKAMKDKAAREGRD--LGQLARTAAMATFATMNARIAIFVHEV-------ETPARL-GVRMICPSCRTNKFVLPPGAKNNGFSSMFSQKVRVVHDVDGVVVLLAGKYRCKNPECALVKASARSKAEKEEKKEGGQKATDVV----WDDAAVSSRCPDGVSFIAADERYMKILPPAVREQLPYHFFKQQGATSLKLLEMVRATGGDMQGFHRMLLARDQGQG-IRDCNRYVRFAKMEQANESKSR---VDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRY----GHVENKDNVLRELLGLRGGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDYFPALKRAPLADAFHSIQTLTGATTTKDHPHKAHYSKEMG 1596 L P+ VAAAF P AP+ P +NPE RA A+K K +R G+ + L + AMA FA A++VHEV TP GVRMICP C++N V PPG +GF + + K V L G L S K + EGGQ+ V+ WD+A + P+G S D+R+ +QG ++ +R H + +G + V + +A R VD F V + + + L + + D H ++K+++ RE+ G L D ++R+ + + + +F + GE+ K+H GAV+SE KEE LL++RYA+ RR + T L + FYDD CC A D TK W+ D F + R LAD+FH QTL GATT+K+HP KA ++ +G Sbjct: 6 LPPKYVAAAFNRHFPGAPICRPADNPEKRAAAAMKAAKVTPAMRSRIGKGEIMDVLLKEPAMAVFAMTQVMFALYVHEVVYVHEVVTTPGGAKGVRMICPGCKSNSEVKPPGVSGHGFPNAGAHKASSTF-----AVFLHG----------LRVPSRLGKCQ-----EGGQQKRVVIANDGWDEATIREHGPNGASLTTMDDRH-----------------GEQGRELREMHRYIRFAAKHRSAEHALWPGWKFSRGTLISTPSIVVLNTIYKAGHDDVRGGSVDT-FLVLVRFLVSARVLFRRVQILLCRHTDHNVVFCRHPQDKEHMQREIHSQYWGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAGGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWFYDDLCCRGADDVTKGWILDIFEGVMRRALADSFHFGQTLVGATTSKNHPRKAVFAAGVG 434
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 148 bits (374), Expect = 4.500e-34 Identity = 77/193 (39.90%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 943 MQGFHRMLLARDQGQGIRDCNRYVRFAKMEQANESKSRVDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNVLRELLGLRGGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDYFPALKRAPLADAFH 1521 M+ + R+L+A +QG+ +R+ +RY+RFA ++ E +WP WK + TL S PS+AVLN I + GH ++K+++ RE+ GG L D ++R+ + + + +F + GE+ K+H YGAV+SE KEE LL++RYA+ RR S T L + YD CC A D TK W+ D F + R LA++FH Sbjct: 1 MKTYRRILVAGEQGRELREMHRYIRFAAKHRSAEH--------ALWPGWKFSRGTLISTPSIAVLNTIYKAGHDDDKEHMQREIHSQYGGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHSYGAVQSERKEEIYLLLKRYAERRRRSGTLLALKWLYDYLCCRGADDVTKGWILDIFEGVMRRALANSFH 185
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.280e-32 Identity = 104/268 (38.81%), Postives = 142/268 (52.99%), Query Frame = 1 Query: 265 SPREVAAAFLAKIPHAPMVSPRENPEARAREALKP---TKAMKDKAAREGRDLGQLARTAAMATFATMNARIAIFVHEV--------------ETPARLGVRMICPSCRTNKFVLPPGAKNNGFSSMFSQKVRVVHDVDGVVVLLAGKYRCKNPECALVKASARSKAEKEEKKEGGQKATDVVWDDAAVSSRCPDGVSFIAADE-RYMKILPPAVREQLPYHFFKQQGAT-----SLKLLEMVRATGG--DMQGFHRMLLARDQGQGI 993 SPR AAAF + P++P+ P E+ E RA EA++P T AM+D+ ++ DLG R AAMATFAT++ IA +VHEV T GVRMICP C++NKFV PPG +GF M K+RV HDV GVVV + G+Y C P C L SA+ A +++ D WD+ + CP+GVSF DE + +I A R P+ +K ++ S+ +L + A G D HR LL+ GQ + Sbjct: 89 SPRLEAAAFKRRFPNSPVCKPLESVETRAIEAMQPSAATGAMQDRPKKD-EDLGHRLREAAMATFATIDVEIAPYVHEVIFFEELVRDDRFKVNTRGGAGVRMICPGCKSNKFVKPPGVSGHGFPCM-GAKLRVAHDVAGVVVPVTGRYACLGPGCPLRLESAKRSAARKK-----SVVADDGWDEDTIKKHCPNGVSFNTMDESKQQEIERKAGRGPTPWPPWKFNRSSITATPSVAVLNTIYAAGHEEDKGHMHRELLSLVDGQFV 349
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5KAB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB7_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.670e-23 Identity = 114/413 (27.60%), Postives = 163/413 (39.47%), Query Frame = 1 Query: 235 PPVVSGEVCLSPREVAAAFLAKIPHAPMVSPRENPEARAREALKPTKAMKDKAAR--EGRDLGQLARTAAMATFATMNARIAIFVHEVETP--ARLGVRMICPSCRTNKFVLPPGAKNNGFSSMFSQKVRVVHDVDGVVVLLAGKYRCKNPECALVKASARSKAEKEEKKEGGQKATDVVWDDAAVSSRCPDGVSFIAADERYMKILPPAVREQLPYHFFKQQGATSLKLLEMVRATGGDMQGFHRMLLARDQGQGIRDCNRYVRFAKMEQANESKSRVDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNVLRELLGLRGGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTK 1461 PP E L P+ V AA + P AP+ P ++PE RA A+K K + R G + L + MA FAT A++VHEV T GVRMICP C++N V PPG + F + +QK L + K + P +V A D WD+A CP+G SFI D+R +L+A +QG+ +R+ + +RF + S +G A RI H + + G L D ++R+ + + + + + GE+ K+H YGAV+SE KEE LL+ RYA+ RR + T L + YDD CC A D TK Sbjct: 31 PPQWKKERHLPPKYVVAALNRRFPDAPICRPADSPEKRAAAAMKAAKVTPAMSTRVENGAIIDVLLKELVMAVFATTQVVFALYVHEVVTTPSGAKGVRMICPGCKSNSEVKPPGVSGHDFPNAGAQKASRTF----AGTLSSWKVPRRWPTKKVVIA-------------------DDGWDEATSREHCPNGASFITMDDR--------------------------------------------ILVAGEQGRELREIHWCIRFRVLS------SSTGQG--------------------AHATRI----HSQCE------------GQFLCMDGTWRIGLRVIDSPDCLCFLLGEDAKVHSYGAVQSERKEEIYLLLNRYAERRRRNGTLLALEWVYDDLCCRGADDVTK 334
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5KXX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX1_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.130e-21 Identity = 69/237 (29.11%), Postives = 104/237 (43.88%), Query Frame = 1 Query: 763 WDDAAVSSRCPDGVSFIAADERYMKILPPAVREQLPYHFFKQQGATSLKLLEMVRATGGDMQGFHRMLLARDQGQGIRDCNRYVRFAKMEQANESKSRVDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNVLRELLGLRGGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQ 1473 WD+A + CP+G SF D+RYM++ P + +LP+ +F+Q G TS LL+ VRAT GD+Q M + G C + H + + G L D ++R+ + + + +F + GE+ K+H YGAV+SE KEE LL++RYA+ RR + T L + YD CC A D TK W++ Sbjct: 183 WDEATIREHCPNGGSFTTMDDRYMQLPPEEIVSRLPFRYFRQNG-TSETLLDQVRATEGDLQDKEHMQRESTRSMGGSSCAXRI------------------------------------------------HSQYR------------GQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAYGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWLYDYLCCRGADDVTKGWIR 358
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5K9V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V7_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 9.990e-17 Identity = 68/224 (30.36%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 832 MKILPPAVREQLPYHFFKQQGATSLKLLEMVRATGGDMQGFHRMLLARDQGQGIRDCNRYVRFAKMEQANESKSRVDEGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNVLRELLGLR----------GGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQ 1473 M++LP + +LP+ +F+Q G TS LL+ VRAT GD+Q +L+ D F + + S V + N++T + R H + VL G GG L D ++R+ + + + +F + GE+ K+H YGAV+SE KEE LL+++YA+ RR + T L + YDD CC A D TK W++ Sbjct: 1 MQLLPEEIVSRLPFRYFRQNG-TSETLLDQVRATEGDLQLGCTLLVLLD-------------FRCDKSDSTENSLVIRPMCLLLLAPLNMKTCRRILVAGEQGQELREMHWCIRFCVLSSSTGQGAHATRIHSQYGGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAYGAVQSERKEEIYLLLKKYAERRRRNGTLLALECLYDDLCCRGADDVTKGWIR 210
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5KD21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD21_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 1.670e-10 Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 1207 GGNILRTDTSFRVAGKTLLAVKGIFSMFGEEGKIHRYGAVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKA 1446 GG L D ++R+ + + + +F + GE+ K+H YGAV+SE KEE LL++RYA+ RR + T L + YDD CC A Sbjct: 28 GGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAYGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWLYDDLCCRGA 107
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Match: A0A6H5KIF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF9_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 2.240e-5 Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 343 ARAREALKPTKAMKDKAAREGRDLGQLARTAAMATFATMNARIAIFVHEVETP--ARLGVRMICPSCRTNKFVLPPGAKNNGFSSMFSQK 606 A A +A K T AM + G + L + +AMA FAT A++VHEV T GVRMICP C++N V PPG + F + +QK Sbjct: 75 AAAMKAAKVTPAMSTRV-ENGEIIDVLLKESAMAVFATTQVVFALYVHEVMTTPGGAKGVRMICPGCKSNSEVKPPGVSGHEFPNAGAQK 163 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15720.3998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15720.3998.1 >prot_L-elsbetiae_contig15720.3998.1 ID=prot_L-elsbetiae_contig15720.3998.1|Name=mRNA_L-elsbetiae_contig15720.3998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=536bp MCHRWIQEGATRIAVRSAANPNNFDHFCSTCKRSEPQLVRRGEHDHQGTVback to top mRNA from alignment at L-elsbetiae_contig15720:224..3766+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15720.3998.1 ID=mRNA_L-elsbetiae_contig15720.3998.1|Name=mRNA_L-elsbetiae_contig15720.3998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3543bp|location=Sequence derived from alignment at L-elsbetiae_contig15720:224..3766+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15720:224..3766+ >mRNA_L-elsbetiae_contig15720.3998.1 ID=mRNA_L-elsbetiae_contig15720.3998.1|Name=mRNA_L-elsbetiae_contig15720.3998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3216bp|location=Sequence derived from alignment at L-elsbetiae_contig15720:224..3766+ (Laminarionema elsbetiae ELsaHSoW15)back to top |