mRNA_L-elsbetiae_contig1038.397.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1038.397.1
Unique NamemRNA_L-elsbetiae_contig1038.397.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 1.020e-131
Identity = 222/337 (65.88%), Postives = 251/337 (74.48%), Query Frame = 1
Query:    4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEA----------EQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGF-GRSARRPSQ--RYGNGLYFSSVSGKSNDYAGDSEKV 975
            CQLHGC+ E+FFDEDTN VHDFC   HAN+AR+RG+WP PG QGSS XXXXXXXXXXXXXXXXXXXXXXXXXXX              E  +  ++++C  P        AW+D  SGDQL FCG+RCAY  GA H VGQ+KCSLPGCN+FTM H+ TM ++GYC D HR+KAEER LT N   HVDRTFRGGPSDDFKLSVLT  H  +SSLKEQFL KF KP  GL VERIF+VQVP DV  K +  E+   NT RRFHGTSCSD C+FF+DLRGGPCGR DC VCSICTHGF+  G  GR+A+R +   RYG GLYFSSVSGK+NDYA  SEKV
Sbjct:   23 CQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRP--------AWMDIRSGDQLAFCGSRCAYTCGAHHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEKV 351          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 9.020e-125
Identity = 219/329 (66.57%), Postives = 242/329 (73.56%), Query Frame = 1
Query:    4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSS--GXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEG-FGRSARRPSQ--RYGNGLYFSSVSGKSNDYAGDSEKV 975
            CQLHGC+ EVFFDE TN V          +AR+RG+WP PG QGSS   XXXXXXXXXXXXXXXXXXXXXXXXXXX      A  A +       N    R AW+D  SGDQL FCG+RCAY  GAQHLVGQ+KCSLPGCN+FTM H+ TM ++GYC D HR+KAEER LT N   HVDRTFRGGPSDDFKLSVLT  H  YSSLKEQFL KF KP  GL VERIF+VQVP DV  K +  E+   NT RRFHGTSCSD C+FF+DLRGGPCGR DC VCSICTHGF+  G  GR+A+R +   RYG GLYFSSVSGK+NDYA  SEKV
Sbjct:   53 CQLHGCNTEVFFDEATNTVXXXXXXXXXXMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDHRSGDQLAFCGSRCAYTCGAQHLVGQMKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEKV 381          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 3.780e-82
Identity = 153/338 (45.27%), Postives = 190/338 (56.21%), Query Frame = 1
Query:    1 RCQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPP--GTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFY----RLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPS--DDFKLSVLTNQHPNYSSLKEQFLQKFLKP--SAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKF-EGFGRSARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975
            RC+L GC   V+ DE + RVH+FC   HAN A + G+   P  GT    G                            +    ++       A   +E       R AWVD+ +G  L +CG+RCA   G  +LVG   CSLPGC      H     E GYC + HR++A +R L  N  P VDRTFRGG +  DDF+LSVLTN+HP Y S K+QF+QK+ KP    G+ V RIF+VQVP D+  +       VGN  RRFHGTSCS+ C FFVDLRGGPCG   C VC+ICTHGF+  +  G +ARR +   RYG+GLYFSSVSGK+NDYA  SEK 
Sbjct:   65 RCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKT 402          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.700e-64
Identity = 129/331 (38.97%), Postives = 171/331 (51.66%), Query Frame = 1
Query:    4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSD--DFKLSVLTNQHPNYSSLKEQFLQKFLKPS--AGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEG-FGRSARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975
            C+L GC   V+FD     V             + G+W    + G++                              ++ +A  A   +C     +     AW+    G Q  +C +RCA   G Q       C L GC+E  + H  T   L YC + HRV+ E++ L  N + +V+R F  G +   DFKL VL+  HP+Y SL +QF+ K++KP    G+ VE+I  V+VP+DV  K + +E+TVGN  RRFHGTSCS  C FFVDLRG PC    C VCSICTHGF  +G  G +ARR +   RYG GLYFSSVSGK+NDYA  SEK 
Sbjct:   58 CKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQ-ANTRECL---RKGCTSTAWLANIEGPQ--YCSSRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKT 382          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.220e-48
Identity = 99/205 (48.29%), Postives = 127/205 (61.95%), Query Frame = 1
Query:  385 VGQLKCSLPGCNEFTMRHELTMAELGYCS---DIHRVKAEERMLTVNTNPHVDRTFRGGPSD--DFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEG-FGRSARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975
            +G  +C L GC++   R  +T  E  YCS     H +   + M TV +  HV + FRGG +   DF LSVL+  H  YSSL  QF+ K++K      V RI +V+VP+D+  K+  +++  GN  RRFHGTSCS  C FFVDL+G PC    C VC+ICT+GF  +G  G +A+R S   RYG GLYFSSVSGKSNDYA  SEKV
Sbjct:   21 MGASECKLKGCSKNVYRDPVTGLESDYCSRGHQAHAIALGQGMRTVTS--HVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVP-HVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKV 222          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.620e-44
Identity = 87/160 (54.37%), Postives = 105/160 (65.62%), Query Frame = 1
Query:  511 VNTNPHVDRTFRGGPSD--DFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFGR-SARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975
              T  HV++TFRGG +   DF LS L+  HP Y SL  QF+ K+LKP    +V RI +V+VP D+  K   +++  GN  RRFHGTSCS  C FFVDL+G PC    C VC+ICTHGF      R +ARR +  +RYG GLYFSSVSGKSNDYA  SEKV
Sbjct:    2 AGTQSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVP-RVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKV 160          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 4.310e-43
Identity = 139/330 (42.12%), Postives = 180/330 (54.55%), Query Frame = 1
Query:    4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLV-----GQLKCSLPGCNEFTMRHELTMAELGYCSDIHRV--KAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKP--SAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKF-EGFGRSA--RRPSQRYGNGLYFSSVSGKSNDYA 957
            CQL GC + V+FD DT RV+             RG+W P        XXXXXXXXXXXXXXXXXXXXXXXX   Y   +    AR   C           AW+  ++ D   +C    AY    + LV     G + C L  C+  T+ H  T  +LGYCS+ HR+  K   +    ++ P+V   +  G +  F L  L   HP   SL+ QF  K++KP  + G+ V RIF+V+VP++V  K   + +TV N  RRFHGTSCSD C F VD +  PCG   C++C+I   GFK  E  GR+A  R  + RYG G+YFSSVSGK+NDYA
Sbjct:   57 CQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARR-GCTST--------AWL--ANTDSRQYCS---AYCFSKERLVLNKHAGSV-CKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVG-TPRFNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYA 370          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: A0A7S2I3A7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I3A7_9EUKA)

HSP 1 Score: 144 bits (362), Expect = 5.610e-37
Identity = 109/334 (32.63%), Postives = 142/334 (42.51%), Query Frame = 1
Query:    4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERML----TVNTNPH-VDRTFRGGPSD-DFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVG---NTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFGRSARRPS-QRYGNGLYFSSVSGKSNDYAGDSEKV 975
            C+L  CD+ V +D DT+RVH+FC LTHA  A++RG  PP                                                                   S  QL   GT             + +CSLPGC+      +       +C   H   A  R L       T P  VDR +RG   + ++ LSVLTN HP Y  +K+QF Q +  P+    + R+ QV+ P+ V   F  H + +G   NT RRFHGTS +  C F +D+   PC    CAVC+IC   F     G +AR  +  RYG GLYFS VS KSNDY   SE+V
Sbjct:   23 CKLPECDQPVAYDRDTDRVHEFCCLTHACEAQARGIVPP-------------------------------------------------------------------SNRQLQGQGTP------------ENRCSLPGCSAPRFVDQTGYVH-DFCGRTHARAASMRGLLPASAAGTPPAGVDRVWRGRAGEPEYVLSVLTNAHPKYEGIKQQFRQAWEHPTPMPTIMRVLQVRNPASVYDSFVQHARQLGGGGNTQRRFHGTSLAPQCSFGIDVTQPPCNDSSCAVCTICATSFDLRFAGSAARTGAFLRYGRGLYFSKVSSKSNDYNQGSERV 276          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: R1C5Q9_EMIHU (RanBP2-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C5Q9_EMIHU)

HSP 1 Score: 140 bits (353), Expect = 2.240e-35
Identity = 84/223 (37.67%), Postives = 112/223 (50.22%), Query Frame = 1
Query:  358 AYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFG-----------------RSARRPSQRYGNGLYFSSVSGKSNDYAGDSEKV 975
            A A G        +C LPGCN   + H       G+C+D H+ +AE R L     P V+R F G  + ++   +LT   P  SS+ EQF   + KP    +VER++ ++ P  +S +F  H   VGN  RRFHGT  +  C F VDL   PC    CA+CSI  HG     +G                  ++ R + RYG GLYFSS SGKSNDYA  SE++
Sbjct:   73 AAACGVATTPPPQRCGLPGCNRGRLHH-------GFCTDDHKQRAERRGLLAPAAPGVERVFVGS-TGEYACDLLTRASPERSSVIEQFTIAWRKPGTVPRVERVYAIRPPPALSERFARHLAAVGNERRRFHGTGAT--CDFAVDLNRAPCNSRGCALCSILGHGISCPRYGMQLVHAGFLRAHAGSGPNASNRAALRYGPGLYFSSTSGKSNDYATHSERL 285          
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS84_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 5.920e-34
Identity = 89/248 (35.89%), Postives = 129/248 (52.02%), Query Frame = 1
Query:  298 RLAWVDQSSGDQLTFCGTRCA--------YASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTV----NTNPHVDRTF--RGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFL--KPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGP-CGRVDCAVCSICTHGFKF-EGFGRSARRPSQ----RYGNGLYFSSVSGKSNDYAGDSEKV 975
            R A++  ++G Q  FC   CA        + +  ++  G+  C LP C +  +    T   L +CS+ HR+   +R        +  P+           S   KL  L   HP + SL +QF  K+L  KP  G++V  + +++VP DV  +   ++  V N  RRFHGT  S  CQF+V   GGP C R DC +CSICTHGF+  +  G S  R ++     YG GLYFSSVSGK+ND++ ++EKV
Sbjct:   19 RTAFLANTAGRQ--FCSRACARKAVGKTIWTALIENSGGEAYCRLPDCPQKALPCG-TWRSLSFCSEAHRIFFAQRAPVPFRQWSAEPYTTHVMVAHQTTSSPLKLHFLDEGHPTHKSLADQFTSKWLHSKPKRGVEVLNVIKIEVPRDVRERHEDYKTAVPNVRRRFHGTFASSSCQFYV---GGPICLRPDCGLCSICTHGFELGDNVGESPARGNKIHWLMYGKGLYFSSVSGKANDFSAETEKV 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPY9_9PHAE1.020e-13165.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSB5_ECTSI9.020e-12566.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LS86_ECTSI3.780e-8245.27PARP catalytic domain-containing protein n=2 Tax=E... [more]
D8LS87_ECTSI1.700e-6438.97PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU6_ECTSI1.220e-4848.29PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU8_ECTSI3.620e-4454.38PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS88_ECTSI4.310e-4342.12PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A7S2I3A7_9EUKA5.610e-3732.63Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
R1C5Q9_EMIHU2.240e-3537.67RanBP2-type domain-containing protein n=1 Tax=Emil... [more]
D8LS84_ECTSI5.920e-3435.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1038contigL-elsbetiae_contig1038:15132..18633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.5
Seed ortholog evalue5.9e-55
Seed eggNOG ortholog2880.D8LS87
Hectar predicted targeting categoryother localisation
EggNOG OGs28J37@1,2S14A@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-12_004140.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size990
Cds size990
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1038.397.1prot_L-elsbetiae_contig1038.397.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1038 15132..18633 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815264.5365698-CDS-L-elsbetiae_contig1038:15131..153201622815264.5365698-CDS-L-elsbetiae_contig1038:15131..15320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 15132..15320 -
1691682804.8170896-CDS-L-elsbetiae_contig1038:15131..153201691682804.8170896-CDS-L-elsbetiae_contig1038:15131..15320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 15132..15320 -
1622815264.5461254-CDS-L-elsbetiae_contig1038:15937..160541622815264.5461254-CDS-L-elsbetiae_contig1038:15937..16054Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 15938..16054 -
1691682804.8280246-CDS-L-elsbetiae_contig1038:15937..160541691682804.8280246-CDS-L-elsbetiae_contig1038:15937..16054Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 15938..16054 -
1622815264.556934-CDS-L-elsbetiae_contig1038:16346..165231622815264.556934-CDS-L-elsbetiae_contig1038:16346..16523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 16347..16523 -
1691682804.836298-CDS-L-elsbetiae_contig1038:16346..165231691682804.836298-CDS-L-elsbetiae_contig1038:16346..16523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 16347..16523 -
1622815264.5691874-CDS-L-elsbetiae_contig1038:17097..173331622815264.5691874-CDS-L-elsbetiae_contig1038:17097..17333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 17098..17333 -
1691682804.8544521-CDS-L-elsbetiae_contig1038:17097..173331691682804.8544521-CDS-L-elsbetiae_contig1038:17097..17333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 17098..17333 -
1622815264.5782387-CDS-L-elsbetiae_contig1038:17692..177651622815264.5782387-CDS-L-elsbetiae_contig1038:17692..17765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 17693..17765 -
1691682804.869689-CDS-L-elsbetiae_contig1038:17692..177651691682804.869689-CDS-L-elsbetiae_contig1038:17692..17765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 17693..17765 -
1622815264.5904517-CDS-L-elsbetiae_contig1038:18435..186331622815264.5904517-CDS-L-elsbetiae_contig1038:18435..18633Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 18436..18633 -
1691682804.8820295-CDS-L-elsbetiae_contig1038:18435..186331691682804.8820295-CDS-L-elsbetiae_contig1038:18435..18633Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1038 18436..18633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1038.397.1

>prot_L-elsbetiae_contig1038.397.1 ID=prot_L-elsbetiae_contig1038.397.1|Name=mRNA_L-elsbetiae_contig1038.397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
RCQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGCQ
LPGCNRWVYRDPSTGEESAFCGRSHYEEAEQASYARDIKCAPPTNELFYR
LAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTM
AELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPN
YSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRR
FHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFGRSARRPSQ
RYGNGLYFSSVSGKSNDYAGDSEKVPACS*
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mRNA from alignment at L-elsbetiae_contig1038:15132..18633-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1038.397.1 ID=mRNA_L-elsbetiae_contig1038.397.1|Name=mRNA_L-elsbetiae_contig1038.397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3502bp|location=Sequence derived from alignment at L-elsbetiae_contig1038:15132..18633- (Laminarionema elsbetiae ELsaHSoW15)
CGCTGCCAGCTGCACGGCTGTGACGAGGAGGTGTTCTTCGACGAGGACAC CAACAGAGTGCACGACTTCTGCAGTCTCACGCACGCCAACATTGCGAGGT CCAGGGGGGAGTGGCCCCCTCCGGGCACGCAAGGGTCCTCGGGATGCCAG CTCCCCGGCTGCAACCGATGGGTCTACCGCGACCCGTCCACGGGAGAGGT CCGTAGCTGGAGAGCAACAAGTTGGCGGGGAGTGGGGGGCGGGAGGAAGG GAAAGCGTTGAGCTCGTTGTTGTTCTTTGTTTCCTGTGACGGGGGGCGGC AATGGCAGAAGCTTGCGTATCTGTTTGGGCTACATATCTTGCTTGTTTGT CTGATGGATCATGTAAGAGTCTCTGCCGTTTCCCTATTCCTAAAATCTAT GTCGGCTCGCTGGGGGGCTTCTTCTCAACGAAGACACCCTGTTCTGTAGG TACAAGTTACCTTGTGTCGTTTTTCCCTTGGCCTATGAAGGCAGAAGTAT GTACTCCCGAACGAGTGTTTTTTTAAACATTAGAAGCAGCACAATAGTAG TAGCAAGCACGATATTGGAAGTGTTGTGTGCCCAACGGAACAGAACCAAT GTTAAATTATCCAGGCGTTTACGGGGTTTTCGGTCAAGGAGTCGACCCTG CGCGTGCCTGCATGTTTCTCGGGCACCTCCGTCCGCGCGTTTTCTGCGCA GACCACGGCACAGGCATTTTCTCTTTTGACGGGGTGTGGATGTCGACGTT CCCTCGACCGGTGTGGCGGTTATCCCCGTGTGCAATTTGTTTTCGCCGCT CTCTTTAGTTTCACTCATCGTACTGTTCATCGTACTGTTCGCCTTTCCCT TCTGTCCTCGTCTTGCAGGAGTCCGCGTTCTGCGGCCGCTCCCACTACGA AGAGGCCGAGCAGGCTTCGTATGCTCGCGACATCAAATGCGGTTTCCACG GTTGCGCCAGGTATGTACACATGTAAACTGAGAGGACACGCGGTACGACC GCGTATGCCACACAACACGGTACACATATCGCATCTGAGTGAAAGCTTCC ATTAGATCGTATGTAGCATGTTTTTACGTGCAGTTCGCAGAACGGCTCTG GGCTTGTCGGTCGGTTGTTCAGCTGAGGCCATCTCAGCAGCGGCTGGTCG AGGTGGCGGTCGCTCACTGGTTCGGTAGTTTGTTCACCTCTCTCATTTTT GGGCACGACAGGTGTGTGAGCTTTGTTCTTCCCCCCGGTTCGAACTCTAT CCTCCATGCAGCGAACTACACCGCGGTGACGATGTTGCTATTAGTCCGAG CCCCCCCGACCAACGAACTGTTTTACAGGCTTGCGTGGGTGGACCAGAGC TCGGGCGATCAGCTCACGTTCTGCGGCACCCGCTGCGCCTATGCAAGCGG AGCGCAACACCTAGTCGGACAGCTAAAGTGCAGCCTACCCGGGTGCAACG AGTTCACGATGAGACACGAGCTGACGATGGCAGAGTTGGGTTACTGCAGC GACATCCACCGCGTTAAGGCCGAGGAGCGAATGCTGGTGAGATGAAGTCA CGAGACGGGGAGAGGATTCTAGACGTGGCTGGGTTCATGCCGGGGATTGA TACGAGTAGAGAACGGAAAGTCCTGAAATGAGGCTTGGATCGTTGCCTGC CTTCACCCTATCCTCCAAGCCCACACAGGCACGAAAGTTCGCGTGCCTGA GCACATGATTACATAACAGGTAAACAGCAAACCATATGCAACATAGTTGG TTCATTTAATTATCTAACTTACGACATTTTAATTATTTCGTTTGCCCTCC TGTTGCACAATATGCAGATTTAGTTCTGCATGTGTGCCTTTCCCTCCACA AGCCAGGATCGTTATAACCGCGTATGTAATGCTGAGATCGTTGTATCATC TTCATACGACCCGACTGCCCCCCTGTAGACTAGGAATTGTTTTTTCTTCG CCCCACAAAGAAAGCCCAACTATGAAGGTCGGGTCGCCGGCTCGTGGAGA GCATCGACTGGCCTGCTAACTCCACGTTTTTTTTCGTGTAAGTATGCCTG TCTCTCTCGTACCTCGCCCGCTGAACCCCCCAAATTCGCTGCGTATTCAT TTGTACGCAGACTGTGAACACAAACCCTCACGTAGACAGAACCTTCAGGG GTGGCCCGTCGGACGACTTTAAGCTGAGCGTTCTCACCAACCAGCACCCT AACTACTCGTCTCTCAAGGAACAGTTCTTGCAAAAGTTCTTGAAGCCCAG TGCTGGCCTGAAGGTGGAGAGAATCTTCCAGGTTCAGGTGAGATGTCGCT ATTCTACACAGCGCAGTAGGGGTTGGTCCATTTCTGTCGTCAATGGTCGC GACATTGAACACTGCTTGTTTTGCTAGATATCAGACACGTTTTTTGTTGC CGCTTTGGCTTCGCTGCCGCGCATGCTGCAGCAGAAGTTACGCGTGCTTG GTTGCTGTGGCTTCCGAGAGTTTCTCCTTGCTGTGGGTTCGATCAACGGG TCTACAAAACAACACCACCTTCGGCGATTCAATGTGAGAATGCACTCTGA TGCTGGTGCGGTTTTTGCCGAGATACCAGGTACCGAGCGACGTGTCGGCG AAGTTCCGTGCGCACGAACAGACGGTTGGAAACACCTGCCGGCGCTTCCA CGGCACCTCCTGCTCCGACGACTGCCAATTCTTCGTTGACCTGAGGGTAA GGCTAGTGGGGTTTGACATTGGTGTGATTTTGGAACGATGTGTGTGTATC GGGTTTGGAAAACATAACGAACCGCGGTCAGCACCGGCAAGAAAGTAACG CCCGTGCGACGGAGATGTAGCAAAATTTAAGCGGCGGTGAACATCCAGCA AGTCTTGGGCTTGGTAGAGCCTTTTCCCCGGGAGCAACTCTTGTCCATCT CGCTTTCGAAATTTTTCAACATGCACCTTATATTGTCTGAGACCGAATTT TGTTTTCGTGTGCAGGTCCCACATGCGGTAGTACTGTTACGTTTGCGGCA TGTAGGATGATACCGTTAGAGGGTTCCACTCACAAGCATTGGTGTTTGGT AGACACGCCTTGCCTCTGTGTAGCTCAAGCGGGGCGGGTAAGAATGTTCA GTCGGTGATTTTGTTGCGCTTATTTTACGGCTTTCTTCCCGCTAGTGCCG CAAGTGGTTTACGTGCTGCTTCTCTCTGCAAGAACCGCAGGGGATAAATG CACCGGTGTAGACCTGTGTGTGCCCACAAACGTTTAAGGTTTGGTCATTT CGGTGGCTGATTTGCAAACCTTTGCTCTTTTTCGGTGCACTCTTTCCTGC GGGCCGGGTTTAGGGGGGTCCTTGTGGTCGAGTCGATTGCGCGGTGTGCT CGATCTGTACGCATGGATTCAAGTTCGAGGGGTTCGGCCGCTCAGCACGG CGTCCAAGCCAGCGCTACGGAAACGGCCTCTACTTCAGCAGCGTCTCCGG GAAGTCCAACGATTACGCGGGCGATTCGGAAAAGGTACCCGCTTGTTCGT GA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1038:15132..18633-

>mRNA_L-elsbetiae_contig1038.397.1 ID=mRNA_L-elsbetiae_contig1038.397.1|Name=mRNA_L-elsbetiae_contig1038.397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig1038:15132..18633- (Laminarionema elsbetiae ELsaHSoW15)
CGCTGCCAGCTGCACGGCTGTGACGAGGAGGTGTTCTTCGACGAGGACAC
CAACAGAGTGCACGACTTCTGCAGTCTCACGCACGCCAACATTGCGAGGT
CCAGGGGGGAGTGGCCCCCTCCGGGCACGCAAGGGTCCTCGGGATGCCAG
CTCCCCGGCTGCAACCGATGGGTCTACCGCGACCCGTCCACGGGAGAGCG
CTGCCAGCTGCACGGCTGTGACGAGGAGGTGTTCTTCGACGAGGACACCA
ACAGAGTGCACGACTTCTGCAGTCTCACGCACGCCAACATTGCGAGGTCC
AGGGGGGAGTGGCCCCCTCCGGGCACGCAAGGGTCCTCGGGATGCCAGCT
CCCCGGCTGCAACCGATGGGTCTACCGCGACCCGTCCACGGGAGAGGAGT
CCGCGTTCTGCGGCCGCTCCCACTACGAAGAGGCCGAGCAGGCTTCGTAT
GCTCGCGACATCAAATGCGGAGTCCGCGTTCTGCGGCCGCTCCCACTACG
AAGAGGCCGAGCAGGCTTCGTATGCTCGCGACATCAAATGCGCCCCCCCG
ACCAACGAACTGTTTTACAGGCTTGCGTGGGTGGACCAGAGCTCGGGCGA
TCAGCTCACGTTCTGCGGCACCCGCTGCGCCTATGCAAGCGGAGCGCAAC
ACCTAGTCGGACAGCTAAAGTGCAGCCTACCCGGGTGCAACGAGTTCACG
ATGAGACACGAGCTGACGATGGCAGAGTTGGGTTACTGCAGCGACATCCA
CCGCGTTAAGGCCGAGGAGCGAATGCTGCCCCCCCGACCAACGAACTGTT
TTACAGGCTTGCGTGGGTGGACCAGAGCTCGGGCGATCAGCTCACGTTCT
GCGGCACCCGCTGCGCCTATGCAAGCGGAGCGCAACACCTAGTCGGACAG
CTAAAGTGCAGCCTACCCGGGTGCAACGAGTTCACGATGAGACACGAGCT
GACGATGGCAGAGTTGGGTTACTGCAGCGACATCCACCGCGTTAAGGCCG
AGGAGCGAATGCTGACTGTGAACACAAACCCTCACGTAGACAGAACCTTC
AGGGGTGGCCCGTCGGACGACTTTAAGCTGAGCGTTCTCACCAACCAGCA
CCCTAACTACTCGTCTCTCAAGGAACAGTTCTTGCAAAAGTTCTTGAAGC
CCAGTGCTGGCCTGAAGGTGGAGAGAATCTTCCAGGTTCAGACTGTGAAC
ACAAACCCTCACGTAGACAGAACCTTCAGGGGTGGCCCGTCGGACGACTT
TAAGCTGAGCGTTCTCACCAACCAGCACCCTAACTACTCGTCTCTCAAGG
AACAGTTCTTGCAAAAGTTCTTGAAGCCCAGTGCTGGCCTGAAGGTGGAG
AGAATCTTCCAGGTTCAGGTACCGAGCGACGTGTCGGCGAAGTTCCGTGC
GCACGAACAGACGGTTGGAAACACCTGCCGGCGCTTCCACGGCACCTCCT
GCTCCGACGACTGCCAATTCTTCGTTGACCTGAGGGTACCGAGCGACGTG
TCGGCGAAGTTCCGTGCGCACGAACAGACGGTTGGAAACACCTGCCGGCG
CTTCCACGGCACCTCCTGCTCCGACGACTGCCAATTCTTCGTTGACCTGA
GGGGGGGTCCTTGTGGTCGAGTCGATTGCGCGGTGTGCTCGATCTGTACG
CATGGATTCAAGTTCGAGGGGTTCGGCCGCTCAGCACGGCGTCCAAGCCA
GCGCTACGGAAACGGCCTCTACTTCAGCAGCGTCTCCGGGAAGTCCAACG
ATTACGCGGGCGATTCGGAAAAGGTACCCGCTTGTTCGTGAGGGGGTCCT
TGTGGTCGAGTCGATTGCGCGGTGTGCTCGATCTGTACGCATGGATTCAA
GTTCGAGGGGTTCGGCCGCTCAGCACGGCGTCCAAGCCAGCGCTACGGAA
ACGGCCTCTACTTCAGCAGCGTCTCCGGGAAGTCCAACGATTACGCGGGC
GATTCGGAAAAGGTACCCGCTTGTTCGTGA
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