mRNA_L-elsbetiae_contig1038.397.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE) HSP 1 Score: 388 bits (997), Expect = 1.020e-131 Identity = 222/337 (65.88%), Postives = 251/337 (74.48%), Query Frame = 1 Query: 4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEA----------EQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGF-GRSARRPSQ--RYGNGLYFSSVSGKSNDYAGDSEKV 975 CQLHGC+ E+FFDEDTN VHDFC HAN+AR+RG+WP PG QGSS XXXXXXXXXXXXXXXXXXXXXXXXXXX E + ++++C P AW+D SGDQL FCG+RCAY GA H VGQ+KCSLPGCN+FTM H+ TM ++GYC D HR+KAEER LT N HVDRTFRGGPSDDFKLSVLT H +SSLKEQFL KF KP GL VERIF+VQVP DV K + E+ NT RRFHGTSCSD C+FF+DLRGGPCGR DC VCSICTHGF+ G GR+A+R + RYG GLYFSSVSGK+NDYA SEKV Sbjct: 23 CQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRP--------AWMDIRSGDQLAFCGSRCAYTCGAHHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEKV 351
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI) HSP 1 Score: 372 bits (956), Expect = 9.020e-125 Identity = 219/329 (66.57%), Postives = 242/329 (73.56%), Query Frame = 1 Query: 4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSS--GXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEG-FGRSARRPSQ--RYGNGLYFSSVSGKSNDYAGDSEKV 975 CQLHGC+ EVFFDE TN V +AR+RG+WP PG QGSS XXXXXXXXXXXXXXXXXXXXXXXXXXX A A + N R AW+D SGDQL FCG+RCAY GAQHLVGQ+KCSLPGCN+FTM H+ TM ++GYC D HR+KAEER LT N HVDRTFRGGPSDDFKLSVLT H YSSLKEQFL KF KP GL VERIF+VQVP DV K + E+ NT RRFHGTSCSD C+FF+DLRGGPCGR DC VCSICTHGF+ G GR+A+R + RYG GLYFSSVSGK+NDYA SEKV Sbjct: 53 CQLHGCNTEVFFDEATNTVXXXXXXXXXXMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDHRSGDQLAFCGSRCAYTCGAQHLVGQMKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEKV 381
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 266 bits (679), Expect = 3.780e-82 Identity = 153/338 (45.27%), Postives = 190/338 (56.21%), Query Frame = 1 Query: 1 RCQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPP--GTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFY----RLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPS--DDFKLSVLTNQHPNYSSLKEQFLQKFLKP--SAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKF-EGFGRSARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975 RC+L GC V+ DE + RVH+FC HAN A + G+ P GT G + ++ A +E R AWVD+ +G L +CG+RCA G +LVG CSLPGC H E GYC + HR++A +R L N P VDRTFRGG + DDF+LSVLTN+HP Y S K+QF+QK+ KP G+ V RIF+VQVP D+ + VGN RRFHGTSCS+ C FFVDLRGGPCG C VC+ICTHGF+ + G +ARR + RYG+GLYFSSVSGK+NDYA SEK Sbjct: 65 RCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKT 402
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.700e-64 Identity = 129/331 (38.97%), Postives = 171/331 (51.66%), Query Frame = 1 Query: 4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSD--DFKLSVLTNQHPNYSSLKEQFLQKFLKPS--AGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEG-FGRSARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975 C+L GC V+FD V + G+W + G++ ++ +A A +C + AW+ G Q +C +RCA G Q C L GC+E + H T L YC + HRV+ E++ L N + +V+R F G + DFKL VL+ HP+Y SL +QF+ K++KP G+ VE+I V+VP+DV K + +E+TVGN RRFHGTSCS C FFVDLRG PC C VCSICTHGF +G G +ARR + RYG GLYFSSVSGK+NDYA SEK Sbjct: 58 CKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQ-ANTRECL---RKGCTSTAWLANIEGPQ--YCSSRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKT 382
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.220e-48 Identity = 99/205 (48.29%), Postives = 127/205 (61.95%), Query Frame = 1 Query: 385 VGQLKCSLPGCNEFTMRHELTMAELGYCS---DIHRVKAEERMLTVNTNPHVDRTFRGGPSD--DFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEG-FGRSARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975 +G +C L GC++ R +T E YCS H + + M TV + HV + FRGG + DF LSVL+ H YSSL QF+ K++K V RI +V+VP+D+ K+ +++ GN RRFHGTSCS C FFVDL+G PC C VC+ICT+GF +G G +A+R S RYG GLYFSSVSGKSNDYA SEKV Sbjct: 21 MGASECKLKGCSKNVYRDPVTGLESDYCSRGHQAHAIALGQGMRTVTS--HVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVP-HVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKV 222
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 160 bits (405), Expect = 3.620e-44 Identity = 87/160 (54.37%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 511 VNTNPHVDRTFRGGPSD--DFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFGR-SARRPS--QRYGNGLYFSSVSGKSNDYAGDSEKV 975 T HV++TFRGG + DF LS L+ HP Y SL QF+ K+LKP +V RI +V+VP D+ K +++ GN RRFHGTSCS C FFVDL+G PC C VC+ICTHGF R +ARR + +RYG GLYFSSVSGKSNDYA SEKV Sbjct: 2 AGTQSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVP-RVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKV 160
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 163 bits (413), Expect = 4.310e-43 Identity = 139/330 (42.12%), Postives = 180/330 (54.55%), Query Frame = 1 Query: 4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLV-----GQLKCSLPGCNEFTMRHELTMAELGYCSDIHRV--KAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKP--SAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKF-EGFGRSA--RRPSQRYGNGLYFSSVSGKSNDYA 957 CQL GC + V+FD DT RV+ RG+W P XXXXXXXXXXXXXXXXXXXXXXXX Y + AR C AW+ ++ D +C AY + LV G + C L C+ T+ H T +LGYCS+ HR+ K + ++ P+V + G + F L L HP SL+ QF K++KP + G+ V RIF+V+VP++V K + +TV N RRFHGTSCSD C F VD + PCG C++C+I GFK E GR+A R + RYG G+YFSSVSGK+NDYA Sbjct: 57 CQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARR-GCTST--------AWL--ANTDSRQYCS---AYCFSKERLVLNKHAGSV-CKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVG-TPRFNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYA 370
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: A0A7S2I3A7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I3A7_9EUKA) HSP 1 Score: 144 bits (362), Expect = 5.610e-37 Identity = 109/334 (32.63%), Postives = 142/334 (42.51%), Query Frame = 1 Query: 4 CQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEAEQASYARDIKCAPPTNELFYRLAWVDQSSGDQLTFCGTRCAYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERML----TVNTNPH-VDRTFRGGPSD-DFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVG---NTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFGRSARRPS-QRYGNGLYFSSVSGKSNDYAGDSEKV 975 C+L CD+ V +D DT+RVH+FC LTHA A++RG PP S QL GT + +CSLPGC+ + +C H A R L T P VDR +RG + ++ LSVLTN HP Y +K+QF Q + P+ + R+ QV+ P+ V F H + +G NT RRFHGTS + C F +D+ PC CAVC+IC F G +AR + RYG GLYFS VS KSNDY SE+V Sbjct: 23 CKLPECDQPVAYDRDTDRVHEFCCLTHACEAQARGIVPP-------------------------------------------------------------------SNRQLQGQGTP------------ENRCSLPGCSAPRFVDQTGYVH-DFCGRTHARAASMRGLLPASAAGTPPAGVDRVWRGRAGEPEYVLSVLTNAHPKYEGIKQQFRQAWEHPTPMPTIMRVLQVRNPASVYDSFVQHARQLGGGGNTQRRFHGTSLAPQCSFGIDVTQPPCNDSSCAVCTICATSFDLRFAGSAARTGAFLRYGRGLYFSKVSSKSNDYNQGSERV 276
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: R1C5Q9_EMIHU (RanBP2-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C5Q9_EMIHU) HSP 1 Score: 140 bits (353), Expect = 2.240e-35 Identity = 84/223 (37.67%), Postives = 112/223 (50.22%), Query Frame = 1 Query: 358 AYASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTVNTNPHVDRTFRGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFLKPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGPCGRVDCAVCSICTHGFKFEGFG-----------------RSARRPSQRYGNGLYFSSVSGKSNDYAGDSEKV 975 A A G +C LPGCN + H G+C+D H+ +AE R L P V+R F G + ++ +LT P SS+ EQF + KP +VER++ ++ P +S +F H VGN RRFHGT + C F VDL PC CA+CSI HG +G ++ R + RYG GLYFSS SGKSNDYA SE++ Sbjct: 73 AAACGVATTPPPQRCGLPGCNRGRLHH-------GFCTDDHKQRAERRGLLAPAAPGVERVFVGS-TGEYACDLLTRASPERSSVIEQFTIAWRKPGTVPRVERVYAIRPPPALSERFARHLAAVGNERRRFHGTGAT--CDFAVDLNRAPCNSRGCALCSILGHGISCPRYGMQLVHAGFLRAHAGSGPNASNRAALRYGPGLYFSSTSGKSNDYATHSERL 285
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Match: D8LS84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS84_ECTSI) HSP 1 Score: 135 bits (340), Expect = 5.920e-34 Identity = 89/248 (35.89%), Postives = 129/248 (52.02%), Query Frame = 1 Query: 298 RLAWVDQSSGDQLTFCGTRCA--------YASGAQHLVGQLKCSLPGCNEFTMRHELTMAELGYCSDIHRVKAEERMLTV----NTNPHVDRTF--RGGPSDDFKLSVLTNQHPNYSSLKEQFLQKFL--KPSAGLKVERIFQVQVPSDVSAKFRAHEQTVGNTCRRFHGTSCSDDCQFFVDLRGGP-CGRVDCAVCSICTHGFKF-EGFGRSARRPSQ----RYGNGLYFSSVSGKSNDYAGDSEKV 975 R A++ ++G Q FC CA + + ++ G+ C LP C + + T L +CS+ HR+ +R + P+ S KL L HP + SL +QF K+L KP G++V + +++VP DV + ++ V N RRFHGT S CQF+V GGP C R DC +CSICTHGF+ + G S R ++ YG GLYFSSVSGK+ND++ ++EKV Sbjct: 19 RTAFLANTAGRQ--FCSRACARKAVGKTIWTALIENSGGEAYCRLPDCPQKALPCG-TWRSLSFCSEAHRIFFAQRAPVPFRQWSAEPYTTHVMVAHQTTSSPLKLHFLDEGHPTHKSLADQFTSKWLHSKPKRGVEVLNVIKIEVPRDVRERHEDYKTAVPNVRRRFHGTFASSSCQFYV---GGPICLRPDCGLCSICTHGFELGDNVGESPARGNKIHWLMYGKGLYFSSVSGKANDFSAETEKV 260 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1038.397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1038.397.1 >prot_L-elsbetiae_contig1038.397.1 ID=prot_L-elsbetiae_contig1038.397.1|Name=mRNA_L-elsbetiae_contig1038.397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp RCQLHGCDEEVFFDEDTNRVHDFCSLTHANIARSRGEWPPPGTQGSSGCQback to top mRNA from alignment at L-elsbetiae_contig1038:15132..18633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1038.397.1 ID=mRNA_L-elsbetiae_contig1038.397.1|Name=mRNA_L-elsbetiae_contig1038.397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3502bp|location=Sequence derived from alignment at L-elsbetiae_contig1038:15132..18633- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1038:15132..18633- >mRNA_L-elsbetiae_contig1038.397.1 ID=mRNA_L-elsbetiae_contig1038.397.1|Name=mRNA_L-elsbetiae_contig1038.397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig1038:15132..18633- (Laminarionema elsbetiae ELsaHSoW15)back to top |