mRNA_L-elsbetiae_contig15476.3856.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: D7FW56_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW56_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 1.260e-149 Identity = 218/231 (94.37%), Postives = 223/231 (96.54%), Query Frame = 3 Query: 201 VELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 VELEDDET K +SSIDDEYAQAG+RDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIV HLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLI DKFST LGQRVADVLKYLFPVPKADS RVMTFSNE DV++FRHHMYEKRGGKE+VLHEVGPRFEMQLYQLRLGTLDQ EAENEWVMRPYMNSSKKRRFL Sbjct: 56 VELEDDETCKLKSSIDDEYAQAGIRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVCHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIFDKFSTPLGQRVADVLKYLFPVPKADSRRVMTFSNEEDVLYFRHHMYEKRGGKEMVLHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPYMNSSKKRRFL 286
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A835ZEG9_9STRA (Anticodon-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG9_9STRA) HSP 1 Score: 363 bits (931), Expect = 3.220e-119 Identity = 171/233 (73.39%), Postives = 208/233 (89.27%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGG-KEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++ELEDDET+K RS DDEYAQAG RDP+VCVTTSR+PSSRLKQFAKELKL+VPNAQRINRGN+KV L+ A R ++FTD++VVQETRGEPDGL+V HLPLGPTA+FTLSNCVLRHDI +RGT+SE YPH+I+ FSTALG R AD+LKYLFPVPK +S R +TF+N++D + FRHH++E++GG KEV L EVGPRFEMQLYQ++LGT+DQ EA+NEWV+RPYMNS+K+RR+L Sbjct: 57 EIELEDDETAKVRSHADDEYAQAGHRDPRVCVTTSREPSSRLKQFAKELKLIVPNAQRINRGNYKVSGLIDAARQNDFTDVVVVQETRGEPDGLLVCHLPLGPTAYFTLSNCVLRHDIPNRGTMSEAYPHMILHGFSTALGARTADILKYLFPVPKPESKRAITFANDSDFISFRHHVWERKGGSKEVTLKEVGPRFEMQLYQIKLGTVDQLEADNEWVLRPYMNSAKRRRYL 289
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A7S2PLF4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLF4_9STRA) HSP 1 Score: 323 bits (828), Expect = 1.280e-103 Identity = 150/233 (64.38%), Postives = 194/233 (83.26%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDI-ADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 +++ ED +TS +S +DDEY AG+ DP++CVTTSRDPSSRLKQF KE+KL++PN+ RINRGN++V EL+ +CR ++FTD++VVQETRGEPDGL+V HLP+GPTAFF LSN VLRHD+ +SE YPHLI++ F+T LG+R+ +VLK LFPVPKA+S RV+TF N+ D + FRHHMYEK+G +V+LHEVGPRFEM+LYQLRLGTLDQ +AENE+V+RPY N++ KR L Sbjct: 64 EIDAEDTKTSVVKSHVDDEYGDAGLEDPRICVTTSRDPSSRLKQFVKEVKLLIPNSTRINRGNNRVDELIASCRDAQFTDVVVVQETRGEPDGLVVCHLPMGPTAFFNLSNSVLRHDLEGGAAPMSEAYPHLILNNFNTNLGKRIGNVLKCLFPVPKAESKRVITFGNDNDFISFRHHMYEKQGKDKVILHEVGPRFEMRLYQLRLGTLDQKDAENEYVLRPYQNTAIKRSVL 296
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A067BWM8_SAPPC (Brix domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BWM8_SAPPC) HSP 1 Score: 321 bits (822), Expect = 7.480e-103 Identity = 146/232 (62.93%), Postives = 195/232 (84.05%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++E +DD+ P+S IDDEY AG+ DPK+ +TTSRDPS+RLK+FA+E++L+ PNA R+NRG H +G+LV + R++EFTD++++ ETRGEPDGL+V HLP GPTA+F+L N V+RHDI DR TVSE YPH+I+DKF+T++GQRV ++LKYLFPVPK DS RV+TFSN D + FRHH+++K G +EV L E GPRFE+QLYQ++LGTL+Q EAENEWV+RPYMN++KKRR + Sbjct: 57 ELEFDDDKHIVPKSHIDDEYQNAGMFDPKIAITTSRDPSARLKKFAQEVRLIFPNAVRLNRGAHTIGDLVESARANEFTDLVMITETRGEPDGLVVCHLPYGPTAYFSLQNVVMRHDIEDRATVSEAYPHIILDKFNTSMGQRVGNILKYLFPVPKPDSKRVITFSNTDDFLSFRHHVFKKTG-REVELQECGPRFELQLYQIKLGTLEQKEAENEWVLRPYMNTAKKRRVI 287
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: K3WK67_GLOUD (Brix domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3WK67_GLOUD) HSP 1 Score: 319 bits (818), Expect = 3.650e-102 Identity = 149/232 (64.22%), Postives = 193/232 (83.19%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++E +D KP + IDDEY AG+ DPK+ +TTSRDPSSRLKQFA+E++L+ PNA R+NRG H VG+LV + RS ++TD+++V ETRGEPDGL+VSHLP GPTA+F+LSN VLRHDI DR T+SE YPH+I+++F T LG+RV+++LK+LFPVPK DS RV+TFSN+ D + FRHH+++K G ++V L E GPRFE+QLYQL+LGT DQ EAENEWV+RPYMNS+KKRR L Sbjct: 63 EMEYDDVVHEKPLNHIDDEYKNAGMFDPKIAITTSRDPSSRLKQFAQEIRLIFPNAIRLNRGAHTVGDLVESARSHDYTDLVIVTETRGEPDGLVVSHLPYGPTAYFSLSNTVLRHDIEDRATISEAYPHIILNQFETVLGKRVSNILKHLFPVPKPDSKRVITFSNDNDFISFRHHVFKKTG-RDVELQECGPRFELQLYQLKLGTCDQKEAENEWVLRPYMNSAKKRRVL 293
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A0P1AMH6_PLAHL (U3 small nucleolar ribonucleoprotein protein imp4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMH6_PLAHL) HSP 1 Score: 318 bits (814), Expect = 1.190e-101 Identity = 151/232 (65.09%), Postives = 195/232 (84.05%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++E +D+ KP + IDDEY AG+ DPKV +TTSRDPSSRLKQFA+E++L+ PNA R+NRG H VG+LV + R+++FTD+++V ETRGEPDGL+V HLP GP+A+F+LSN VLRHDI DR TVSE YPHLI+++F+T LGQRVA++LK+LFPVPK D+ RV+TFSN+ D V FRHH++ K G++V L E GPRFE+QLYQ++LGTL+Q EAENEWV+RPYMNS+KKRR L Sbjct: 57 EMEYDDEAHEKPINHIDDEYKNAGMFDPKVAITTSRDPSSRLKQFAQEIRLIFPNAIRLNRGAHTVGDLVESARANDFTDLLLVTETRGEPDGLVVCHLPYGPSAYFSLSNTVLRHDIEDRATVSEAYPHLIINQFATPLGQRVANILKHLFPVPKPDAKRVITFSNDNDFVSFRHHVF-KVTGRDVELQECGPRFELQLYQVKLGTLEQKEAENEWVLRPYMNSAKKRRVL 287
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A024FYN4_9STRA (Brix domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYN4_9STRA) HSP 1 Score: 318 bits (814), Expect = 1.190e-101 Identity = 148/232 (63.79%), Postives = 191/232 (82.33%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++E +D++ KP +IDDEY AG+ DPK+ +TTSRDPSSRLKQFA+EL++++PNA R+NRG H + LV + RS+EF+D+I+V ETRGEPDGL+V HLP GPTA+F+LSN VLRHDI DR T+SE YPHLI+++F TALG+RVA +LK+LFPVPK DS RV+TF+N+ D + FRHH + K+G K+V L E GPRFE+QLYQ++LGT DQ EAENEWV+RPYMNS+K R L Sbjct: 57 EMEFDDEKHEKPVDTIDDEYRNAGIFDPKIAITTSRDPSSRLKQFAQELRVIIPNAVRLNRGAHTIINLVESARSNEFSDLILVTETRGEPDGLVVCHLPFGPTAYFSLSNTVLRHDIEDRATISEAYPHLILNQFETALGRRVASILKHLFPVPKTDSKRVITFANDHDFISFRHHTFRKQG-KQVELSECGPRFELQLYQIKLGTCDQKEAENEWVLRPYMNSAKNRNHL 287
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A4D9D6I8_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I8_9STRA) HSP 1 Score: 317 bits (812), Expect = 2.710e-101 Identity = 150/234 (64.10%), Postives = 190/234 (81.20%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGGK--EVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++ LEDD T++P + IDDEY AG RDPKVCVTTSRDPSSRLKQF KE+KL+ PNAQ +NRGN KV ELV ACR+ +FTD++VVQETRG+PDGL+V HLPLGPTA+FT+SN V+RHDI DR VSE YPHLI++ F + LG+RVAD+LK+ FP P+ S RV+TF+NE D + FRHH +EK G EV L E+GPRF++ ++Q++LGTL+Q +AE E+V RPYMN++KKRR L Sbjct: 58 EINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVLELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDRIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRML 291
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A0D6R0Z1_ARACU (Brix domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R0Z1_ARACU) HSP 1 Score: 317 bits (812), Expect = 2.900e-101 Identity = 150/236 (63.56%), Postives = 193/236 (81.78%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADR---GTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEKRGG-KEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 +++ EDD+T+ ++ IDDEYA A RDPK+ +TTSRDPSSRL QF KELK+V PNAQRINRGN + E+V ACRS EFTD+++V E RGEPDGLIV HLP GP+A+F L N V RHDI D+ GT+SE YPHLI+ FST LG+R A++LKYLFPVPK D+ R++TF+N++D + FRHH+YEK GG K + L EVGPRFE++LYQ++LGT+DQ EA+NEWV+RPYMN++KK++FL Sbjct: 56 EIDHEDDQTAVLKTHIDDEYANAAERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGNQVIAEIVEACRSHEFTDIVMVHEHRGEPDGLIVCHLPFGPSAYFGLHNVVTRHDIKDKQAVGTMSEAYPHLILHNFSTKLGERTANILKYLFPVPKPDTKRIITFANQSDYISFRHHVYEKPGGPKSIELKEVGPRFELRLYQIKLGTIDQMEAQNEWVIRPYMNTTKKQKFL 291
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Match: A0A1Y1I9H7_KLENI (IMP4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9H7_KLENI) HSP 1 Score: 315 bits (806), Expect = 2.160e-100 Identity = 149/236 (63.14%), Postives = 194/236 (82.20%), Query Frame = 3 Query: 198 QVELEDDETSKPRSSIDDEYAQAGVRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADR---GTVSEVYPHLIMDKFSTALGQRVADVLKYLFPVPKADSHRVMTFSNEADVVFFRHHMYEK-RGGKEVVLHEVGPRFEMQLYQLRLGTLDQDEAENEWVMRPYMNSSKKRRFL 893 ++ELEDD T++ R+ IDDEYA+AG RDPK+ +TTSRDPSSRL QF KELK+V PNAQRINRG + ++V ACRS++FTD+++V E RGEPDGL+V HLP GPTA+F LSN V RHDI DR GT+SE +PHLI++ F+T LG R ++LK+LFPVPK +S R++TF+N++D + FRHH+YEK +G K V L EVGPRFE++LYQ++LGT+DQ EAE+EWV+RPYMNS++KR L Sbjct: 56 EIELEDDVTAEQRTHIDDEYARAGERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISQIVEACRSNDFTDIVMVHEHRGEPDGLVVCHLPFGPTAYFGLSNVVTRHDIKDRAAVGTMSEAFPHLILNNFNTKLGLRTQNILKFLFPVPKDESKRIITFANQSDYISFRHHIYEKPKGAKSVELKEVGPRFELRLYQVKLGTMDQSEAEDEWVIRPYMNSARKRTAL 291 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15476.3856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15476.3856.1 >prot_L-elsbetiae_contig15476.3856.1 ID=prot_L-elsbetiae_contig15476.3856.1|Name=mRNA_L-elsbetiae_contig15476.3856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp MIVVQETRGEPDGLIVSHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHback to top mRNA from alignment at L-elsbetiae_contig15476:578..3695+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15476.3856.1 ID=mRNA_L-elsbetiae_contig15476.3856.1|Name=mRNA_L-elsbetiae_contig15476.3856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3118bp|location=Sequence derived from alignment at L-elsbetiae_contig15476:578..3695+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15476:578..3695+ >mRNA_L-elsbetiae_contig15476.3856.1 ID=mRNA_L-elsbetiae_contig15476.3856.1|Name=mRNA_L-elsbetiae_contig15476.3856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=918bp|location=Sequence derived from alignment at L-elsbetiae_contig15476:578..3695+ (Laminarionema elsbetiae ELsaHSoW15)back to top |