prot_L-elsbetiae_contig15378.3803.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15378.3803.1
Unique Nameprot_L-elsbetiae_contig15378.3803.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length193
Homology
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BLAST of mRNA_L-elsbetiae_contig15378.3803.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 4.060e-8
Identity = 28/40 (70.00%), Postives = 29/40 (72.50%), Query Frame = 0 
Query:    1 MVDVVSKRCTHDGCTKQPSYGKTGGK-AEYCRDHAKDGMV 39
            MVDVVSKRC H GCTK+PSYG  G K AE C  HA  GMV
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
[Close]
BLAST of mRNA_L-elsbetiae_contig15378.3803.1 vs. uniprot
Match: D8LD34_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD34_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 6.090e-5
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 MVDVVSKRCTHDGCTKQPSYGKTGGK-AEYCRDHAKDGM 38
            MV+VV+K C H GCTK+PSYGK+G K AE+C  HA+  M
Sbjct:    1 MVNVVTKPCGHPGCTKKPSYGKSGTKKAEFCSQHAEPDM 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15378.3803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI4.060e-870.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LD34_ECTSI6.090e-561.54EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15378contigL-elsbetiae_contig15378:24..2598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15378.3803.1mRNA_L-elsbetiae_contig15378.3803.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15378 15..2745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15378.3803.1 ID=prot_L-elsbetiae_contig15378.3803.1|Name=mRNA_L-elsbetiae_contig15378.3803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
MVDVVSKRCTHDGCTKQPSYGKTGGKAEYCRDHAKDGMVNVKHRKCTFPG
CTTIANYGGENTGTRKFCARHAEEGMVRLSGRSRGDSKRSGEADDAGARG
SGTASGSRHTSNRASRSGSGGDLHPVRVKRKGADNEVPDDDNLTACPEPG
DAGVKTEDMELPCEMEPWKAAGRTSAARTKRRKAVAGQAGGP*
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