prot_L-elsbetiae_contig15376.3802.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15376.3802.1
Unique Nameprot_L-elsbetiae_contig15376.3802.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length133
Homology
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BLAST of mRNA_L-elsbetiae_contig15376.3802.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 8.610e-82
Identity = 124/133 (93.23%), Postives = 126/133 (94.74%), Query Frame = 0 
Query:    1 EWRTSYKLDTILDEDLSGAGVSQVFYWSGFDRDGRPCLVFRACEHRKSDPDGASPTVEEKVRYYCQLLARGFRDFSPAYKFCLILDCRGAGTNVMDRKLFKVATPIIENNFPETQHATYVLPCNGMITMAWKV 133
            EWRT+YKLDTILDEDLSG GVS  FYWSGFDRDGRPCLVFRACEHRKSD DG SPTVEEKVRYYCQLL RGFRDFSPAYKFCLILDCRGAGTNVMDRKLFKVATPIIENNFPETQHATYVLPCNG+I MAWKV
Sbjct:   78 EWRTTYKLDTILDEDLSGTGVSHEFYWSGFDRDGRPCLVFRACEHRKSDSDGGSPTVEEKVRYYCQLLERGFRDFSPAYKFCLILDCRGAGTNVMDRKLFKVATPIIENNFPETQHATYVLPCNGVIMMAWKV 210
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BLAST of mRNA_L-elsbetiae_contig15376.3802.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 4.570e-47
Identity = 87/132 (65.91%), Postives = 88/132 (66.67%), Query Frame = 0 
Query:    1 EWRTSYKLDTILDEDLSGAGVSQVFYWSGFDRDGRPCLVFRACEHRKSDPDGASPTVEEKVRYYCQLLARGFRDFSPAYKFCLILDCRGAGTNVMDRKLFKVATPIIENNFPETQHATYVLPCNGMITMAWK 132
            EWR +YKLDTILDEDLSG GVS  FYWSGFDRDGRPCLVFRACEHRKSD DGASPTVEEK                                      LFKVATPIIENNFPETQHATYVLPCNGMI MAWK
Sbjct:   78 EWRITYKLDTILDEDLSGTGVSHEFYWSGFDRDGRPCLVFRACEHRKSDSDGASPTVEEK--------------------------------------LFKVATPIIENNFPETQHATYVLPCNGMIMMAWK 171
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BLAST of mRNA_L-elsbetiae_contig15376.3802.1 vs. uniprot
Match: A0A835YGR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGR8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.480e-32
Identity = 63/138 (45.65%), Postives = 84/138 (60.87%), Query Frame = 0 
Query:    1 EWRTSYKLDT---ILDEDLSGAGVSQVFYWSGFDRDGRPCLVFRACEHRKS--DPDGASPTVEEKVRYYCQLLARGFRDFSPAYKFCLILDCRGAGTNVMDRKLFKVATPIIENNFPETQHATYVLPCNGMITMAWKV 133
            EWR +Y+++    ++DED S        YW GFDR+G PCLV+R   H  S  DPD         VRY+C LL  GFR ++PA+KF +++DCR  G   MD KL ++A P++ENN+PE Q ATYV+P      M WKV
Sbjct:   87 EWRVAYRVEGSPGLVDEDFSLFDELNELYWYGFDREGHPCLVWRPGVHSPSVTDPDNM-------VRYFCHLLEVGFRKYAPAHKFVMVIDCRDFGHRNMDWKLLRLAAPLLENNYPERQAATYVVPVGAFTVMTWKV 217
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BLAST of mRNA_L-elsbetiae_contig15376.3802.1 vs. uniprot
Match: A0A1J6IZV6_NICAT (Patellin-3 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1J6IZV6_NICAT)

HSP 1 Score: 51.2 bits (121), Expect = 8.110e-5
Identity = 34/124 (27.42%), Postives = 62/124 (50.00%), Query Frame = 0 
Query:    2 WRTSYKLDTILDEDLSGAGVSQVFYWSGFDRDGRPCL--VFRACEHRK--SDPDGASPTVEEKVRYYCQLLARGFR--DFSP--AYKFCLILDCRGAGTNVMDRKLFKVAT----PIIENNFPE 113
            WR  +K+D +L+EDLSG G+ +V Y  G D++G P     F A +  +   +       + + +R+  Q + +  R  DFSP     F  ++D + +      +K  + AT     ++++N+PE
Sbjct:  331 WRKEFKIDELLEEDLSGLGLEKVVYNHGVDKEGHPVCYNAFGAFQDNELYQNTFADKEKMNKFLRWRIQFMEKSIRNLDFSPDGICTFVQVIDLKNSPGLYFFKKELRQATNRALQLLQDNYPE 454
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15376.3802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FK06_ECTSI8.610e-8293.23CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAS6_9PHAE4.570e-4765.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YGR8_9STRA7.480e-3245.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1J6IZV6_NICAT8.110e-527.42Patellin-3 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 23..133
e-value: 6.9E-14
score: 51.9
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 13..133
score: 8.229
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 19..133
e-value: 4.3E-14
score: 54.3
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 23..133
NoneNo IPR availablePANTHERPTHR46277FAMILY NOT NAMEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR46277:SF3coord: 1..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15376contigL-elsbetiae_contig15376:237..3686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15376.3802.1mRNA_L-elsbetiae_contig15376.3802.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15376 237..3686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15376.3802.1 ID=prot_L-elsbetiae_contig15376.3802.1|Name=mRNA_L-elsbetiae_contig15376.3802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
EWRTSYKLDTILDEDLSGAGVSQVFYWSGFDRDGRPCLVFRACEHRKSDP
DGASPTVEEKVRYYCQLLARGFRDFSPAYKFCLILDCRGAGTNVMDRKLF
KVATPIIENNFPETQHATYVLPCNGMITMAWKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf