prot_L-elsbetiae_contig1535.3791.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1535.3791.1
Unique Nameprot_L-elsbetiae_contig1535.3791.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length257
Homology
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BLAST of mRNA_L-elsbetiae_contig1535.3791.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 7.640e-5
Identity = 20/33 (60.61%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:    8 RCSYQNCTTQPSYGVAGTKVKEFCRQHAQEGMV 40
            +C ++NCT +P+YGVAG+K +EFC QHA++GMV
Sbjct:   63 QCGHENCTKRPTYGVAGSKKREFCSQHARDGMV 95
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1535.3791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE7.640e-560.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1535contigL-elsbetiae_contig1535:22927..23697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1535.3791.1mRNA_L-elsbetiae_contig1535.3791.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1535 22186..23780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1535.3791.1 ID=prot_L-elsbetiae_contig1535.3791.1|Name=mRNA_L-elsbetiae_contig1535.3791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MVNLYAKRCSYQNCTTQPSYGVAGTKVKEFCRQHAQEGMVTIFSNVCSHQ
GCLKESHYGVEGERPALCSKHQKSGMVRSSKKMTCGHQGCETWPSFGVPG
GRPAFCSQHAETGMVNLRSKTCRREGCTTLASFGIPGTKSKKMFCAQHAT
EGTVHLYIHSCSHPSCTKVASYGMAGTKILEFCSPHAKDGMINLRTNKRS
SQAGSAYGNKSGRPKKRPRHPGDLPSVPAPVKQETSEAASPANSSSSEPP
NGVVTS*
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