prot_L-elsbetiae_contig15165.3692.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15165.3692.1
Unique Nameprot_L-elsbetiae_contig15165.3692.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig15165.3692.1 vs. uniprot
Match: D7FW12_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW12_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 2.200e-12
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0 
Query:    1 EDDEAIKQHAERIVSTYISPTALGVPAALIYTSEEQRKALTAKMKRLWRKDRPK 54
            EDDEA KQHAERIV++YISP++ GVP  LIYTSE QR AL AKM+RLW K +P+
Sbjct:  254 EDDEARKQHAERIVASYISPSSSGVPG-LIYTSEAQRNALAAKMRRLWPKHKPR 306
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BLAST of mRNA_L-elsbetiae_contig15165.3692.1 vs. uniprot
Match: A0A6H5JLV2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV2_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 8.580e-8
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 0 
Query:    1 EDDEAIKQHAERIVSTYISPTALGVPAALIYTSEEQRKALTAKMK 45
            ED+EA KQHAERIV++YISP++ GVP+ +IYTSE QR AL AKM+
Sbjct:  285 EDNEARKQHAERIVASYISPSSSGVPS-MIYTSEAQRNALAAKMR 328
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15165.3692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW12_ECTSI2.200e-1270.37Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JLV2_9PHAE8.580e-868.89Cyclic nucleotide-binding domain-containing protei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15165contigL-elsbetiae_contig15165:247..582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15165.3692.1mRNA_L-elsbetiae_contig15165.3692.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15165 247..584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15165.3692.1 ID=prot_L-elsbetiae_contig15165.3692.1|Name=mRNA_L-elsbetiae_contig15165.3692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
EDDEAIKQHAERIVSTYISPTALGVPAALIYTSEEQRKALTAKMKRLWRK
DRPKGNSNSNSNNDCNNSNNNDSDNDNHQNEETGAQKSGGNPEERQQEQE
APSDDGRGVAIA
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