prot_L-elsbetiae_contig15.3593.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig15.3593.1
Unique Name	prot_L-elsbetiae_contig15.3593.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	181

Homology

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: D8LE03_ECTSI (PUA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE03_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 2.300e-113
Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            RFS+DDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTI+KC+DRVSLICCDGVPLFFQQRDG IFPTLRILH YPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRI+TPLEAGA VCI+AEGKKVALAVG T MSTADIQSVNKG GV+NLH+LGDGLFGTK+LD
Sbjct:    4 RFSKDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTIAKCKDRVSLICCDGVPLFFQQRDGHIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIDTPLEAGAAVCILAEGKKVALAVGQTTMSTADIQSVNKGIGVDNLHYLGDGLFGTKELD 181

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A835Z9W5_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.490e-79
Identity = 118/179 (65.92%), Postives = 148/179 (82.68%), Query Frame = 0

Query:    3 RFSQDD-VSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            RF+QD+ VSS+SQ+KSSVQR  RAKL+EQFP  E  L+DILPKKGN+TI+KC ++VSLIC D   +FFQ+RDGPIFPTLR++H YPN MP M+VDKGAI F++NG+NIMC GFTS GGR+E  +EAG  VCI+AEGK+ ALA+G+T MST +I+  NKG GV+N+H+LGDGL+G   LD
Sbjct:    4 RFTQDENVSSNSQIKSSVQRSMRAKLIEQFPLIEEVLDDILPKKGNITIAKCSNKVSLICRDNKIMFFQERDGPIFPTLRLVHQYPNFMPKMQVDKGAIKFILNGSNIMCPGFTSAGGRMEESIEAGQAVCIMAEGKQHALAIGLTVMSTDEIREQNKGIGVDNMHYLGDGLWGVPDLD 182

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A7S2Y120_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y120_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.000e-65
Identity = 102/178 (57.30%), Postives = 132/178 (74.16%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            RF+  ++SS+SQVKSSVQRG RAK++EQ+P  E  +++ILPKK +  +++C + V LIC  G PLFFQ RDGP FP LR++H YP   PTM+VD GAI FVM GANIMC GFTSKGG I    EAG  V I+AE KK ALAVG+T +ST +I+   +G GV+N+H+L DGL+ T+ +D
Sbjct:    4 RFTNSEISSASQVKSSVQRGIRAKIVEQYPALEEEIDEILPKKSDFVVARCPNHVQLICHGGKPLFFQCRDGPFFPCLRLVHQYPGCWPTMQVDLGAIPFVMGGANIMCPGFTSKGGNIPQDYEAGTAVIIMAENKKQALAVGITKLSTEEIRKQKRGIGVDNVHYLNDGLWLTQTID 181

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A9NLI5_PICSI (PUA domain-containing protein n=4 Tax=Pinidae TaxID=3313 RepID=A9NLI5_PICSI)

HSP 1 Score: 202 bits (515), Expect = 1.410e-63
Identity = 95/178 (53.37%), Postives = 135/178 (75.84%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            +FS +++SS +QVK+SVQR  R  + E++P+ EP LED+LPKK  + ++KC++ ++LI  + VPLFF  RDGP  PTLR+LH YPN+M  M+VD+GAI FV+ GANIMC G TS GG ++  + A +PV ++AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+ T QL+
Sbjct:    4 KFSSEEISSQNQVKASVQRKIRQSIAEEYPDLEPVLEDLLPKKSPLIVAKCQNHINLILVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKMQVDRGAIKFVLAGANIMCPGLTSPGGALDDDIPAESPVAVMAEGKENALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKTVQLN 181

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A7R9XUX2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XUX2_9VIRI)

HSP 1 Score: 202 bits (515), Expect = 2.680e-63
Identity = 107/180 (59.44%), Postives = 134/180 (74.44%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGN--VTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            RF+ DDVSS SQVKSSV RG RAK+  QFPN EP L+D+LPK  +  + I KC DR+SL+     PLFFQ RDGP +PTLR+LH YP+MMP +RVDKGAI FV NGA+IMC G TS G  ++  +     V I AEGK+ ALAVG+T MS+ADI+SVNKG+GV+N+H L DGL+  +++D
Sbjct:   23 RFTYDDVSSVSQVKSSVARGIRAKIAAQFPNLEPALDDVLPKGKDTPMMIGKCTDRISLVVVRDEPLFFQFRDGPYYPTLRLLHRYPSMMPVLRVDKGAIKFVFNGADIMCPGLTSPGASMDD-VPTDTVVAIYAEGKEHALAVGLTTMSSADIRSVNKGTGVQNVHVLNDGLWKMEKVD 201

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A1Y1I3Z2_KLENI (Pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3Z2_KLENI)

HSP 1 Score: 201 bits (511), Expect = 5.700e-63
Identity = 96/178 (53.93%), Postives = 133/178 (74.72%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            +F+ ++VS  +QVKSSVQR  R  + +Q+P  EP L+D+LPKK  + ++KC++ ++L+  + VPLFF  RDGP  PTLR+LH YP +M  +RVD+GAI FV++GANIMC G TSKGG +E  ++A  PV I AEGK++ALA+G+T MST DI  +NKG GV+N+H+L DGL+ T  LD
Sbjct:    4 KFTHEEVSGQNQVKSSVQRKIRQSIADQYPLLEPVLDDLLPKKEPLIVAKCQNHLNLVVINNVPLFFNIRDGPYMPTLRLLHQYPTVMKRVRVDRGAIKFVLSGANIMCPGLTSKGGALEDEVDAEQPVAIHAEGKELALAIGMTKMSTGDIAKINKGIGVDNIHYLNDGLWKTLHLD 181

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: K3WJI9_GLOUD (PUA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJI9_GLOUD)

HSP 1 Score: 200 bits (509), Expect = 1.180e-62
Identity = 94/175 (53.71%), Postives = 132/175 (75.43%), Query Frame = 0

Query:    6 QDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            +++VS+SS+VKSS QR  RAK+LEQ+P  EPYLEDI+PKK  + ++KC++ V ++  +G PLF+ QRDGP  PTL++LH  P++M  +R DKGAI FV++GAN+MC G TS GG +   LEAG PV I+AEGK+ A+A+G+  +ST +I+  NKG G+E +HFLGD L+G   +D
Sbjct:    8 EENVSTSSKVKSSQQRTIRAKILEQYPLVEPYLEDIMPKKAPMVVAKCQNHVQIVLHEGEPLFYNQRDGPFMPTLKLLHKIPHIMKQVRADKGAIPFVLSGANVMCPGLTSAGGELPEELEAGTPVAIMAEGKEHAMAIGILTLSTEEIRKQNKGIGIEMVHFLGDDLWGLAHID 182

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A251KDD0_MANES (PUA domain-containing protein n=8 Tax=rosids TaxID=71275 RepID=A0A251KDD0_MANES)

HSP 1 Score: 200 bits (508), Expect = 1.630e-62
Identity = 94/178 (52.81%), Postives = 134/178 (75.28%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            +FS +DVSS +QVK+SVQR  R  + +++P  EP L+D+LPKK  + ++KC++ ++L+  + VPLFF  RDGP  PTLR+LH YPN+M  ++VD+GAI FV+ GANIMC G TS GG ++  +EA  PV I+AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+  ++LD
Sbjct:    4 KFSYEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVMVNSVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIRFVLAGANIMCPGLTSPGGALDEEVEAETPVAIMAEGKEHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERLD 181

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A7J9LKR6_GOSSC (PUA domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J9LKR6_GOSSC)

HSP 1 Score: 200 bits (509), Expect = 1.800e-62
Identity = 95/173 (54.91%), Postives = 129/173 (74.57%), Query Frame = 0

Query:    2 CRFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLF 174
            CRFS +DVSS +QVK+SVQR  R  + E++P  EP L+D+LPKK  + + KC++ ++L+  + VPLFF  RDGP  PTLR+LH YPN+M   +VD+GAI FV+ GANIMC G TS GG ++  +EA  PV I+AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+
Sbjct:   13 CRFSSEDVSSQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVVKCQNHLNLVLVNSVPLFFNIRDGPYMPTLRLLHQYPNIMKKFQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLW 185

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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A3N7FV13_POPTR (PUA domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=A0A3N7FV13_POPTR)

HSP 1 Score: 200 bits (509), Expect = 1.800e-62
Identity = 94/178 (52.81%), Postives = 134/178 (75.28%), Query Frame = 0

Query:    3 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 180
            RFS D+VSS +QVK+SVQR  R  + +++P  EP L+D+LPKK  + + KC++ ++L+  + VPLFF  RDGP  PTLR+LH YPN+M  ++VD+GAI FV++GANIMC G TS GG ++  ++A  PV I+AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+  ++LD
Sbjct:   18 RFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVVKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERLD 195

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE03_ECTSI	2.300e-113	92.13	PUA domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835Z9W5_9STRA	4.490e-79	65.92	PUA-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A7S2Y120_9STRA	3.000e-65	57.30	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A9NLI5_PICSI	1.410e-63	53.37	PUA domain-containing protein n=4 Tax=Pinidae TaxI...	[more]
A0A7R9XUX2_9VIRI	2.680e-63	59.44	Hypothetical protein n=1 Tax=Prasinoderma colonial...	[more]
A0A1Y1I3Z2_KLENI	5.700e-63	53.93	Pseudouridine synthase and archaeosine transglycos...	[more]
K3WJI9_GLOUD	1.180e-62	53.71	PUA domain-containing protein n=1 Tax=Globisporang...	[more]
A0A251KDD0_MANES	1.630e-62	52.81	PUA domain-containing protein n=8 Tax=rosids TaxID...	[more]
A0A7J9LKR6_GOSSC	1.800e-62	54.91	PUA domain-containing protein n=4 Tax=Gossypium Ta...	[more]
A0A3N7FV13_POPTR	1.800e-62	52.81	PUA domain-containing protein n=7 Tax=Pentapetalae...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 91..170 e-value: 7.0E-8 score: 42.2
IPR002478	PUA domain	PFAM	PF01472	PUA	coord: 92..169 e-value: 1.5E-14 score: 53.7
IPR002478	PUA domain	PROSITE	PS50890	PUA	coord: 90..170 score: 14.82
IPR041366	Pre-PUA domain	PFAM	PF17832	Pre-PUA	coord: 6..87 e-value: 9.5E-28 score: 96.7
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10		coord: 84..178 e-value: 1.6E-28 score: 100.4
IPR016437	MCT-1/Tma20	PIRSF	PIRSF005067	Tma_RNA-bind	coord: 1..179 e-value: 3.7E-55 score: 184.8
IPR016437	MCT-1/Tma20	PANTHER	PTHR22798	MCT-1 PROTEIN	coord: 3..177
IPR004521	Uncharacterised domain CHP00451	TIGRFAM	TIGR00451	TIGR00451	coord: 61..171 e-value: 5.6E-24 score: 82.4
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 90..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig15	contig	L-elsbetiae_contig15:78629..82347 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig15.3593.1	mRNA_L-elsbetiae_contig15.3593.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig15 78629..82347 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig15.3593.1 ID=prot_L-elsbetiae_contig15.3593.1|Name=mRNA_L-elsbetiae_contig15.3593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MCRFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTI
SKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAI
SFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMS
TADIQSVNKGSGVENLHFLGDGLFGTKQLD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002478	PUA
IPR041366	Pre-PUA
IPR036974	PUA_sf
IPR016437	MCT-1/Tma20
IPR004521	Uncharacterised_CHP00451
IPR015947	PUA-like_sf