mRNA_L-elsbetiae_contig15.3593.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15.3593.1
Unique NamemRNA_L-elsbetiae_contig15.3593.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: D8LE03_ECTSI (PUA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE03_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 2.300e-113
Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            RFS+DDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTI+KC+DRVSLICCDGVPLFFQQRDG IFPTLRILH YPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRI+TPLEAGA VCI+AEGKKVALAVG T MSTADIQSVNKG GV+NLH+LGDGLFGTK+LD
Sbjct:    4 RFSKDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTIAKCKDRVSLICCDGVPLFFQQRDGHIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIDTPLEAGAAVCILAEGKKVALAVGQTTMSTADIQSVNKGIGVDNLHYLGDGLFGTKELD 181
[Close]
BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A835Z9W5_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.490e-79
Identity = 118/179 (65.92%), Postives = 148/179 (82.68%), Query Frame = 1 
Query:    7 RFSQDD-VSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            RF+QD+ VSS+SQ+KSSVQR  RAKL+EQFP  E  L+DILPKKGN+TI+KC ++VSLIC D   +FFQ+RDGPIFPTLR++H YPN MP M+VDKGAI F++NG+NIMC GFTS GGR+E  +EAG  VCI+AEGK+ ALA+G+T MST +I+  NKG GV+N+H+LGDGL+G   LD
Sbjct:    4 RFTQDENVSSNSQIKSSVQRSMRAKLIEQFPLIEEVLDDILPKKGNITIAKCSNKVSLICRDNKIMFFQERDGPIFPTLRLVHQYPNFMPKMQVDKGAIKFILNGSNIMCPGFTSAGGRMEESIEAGQAVCIMAEGKQHALAIGLTVMSTDEIREQNKGIGVDNMHYLGDGLWGVPDLD 182
[Close]
BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A7S2Y120_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y120_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.000e-65
Identity = 102/178 (57.30%), Postives = 132/178 (74.16%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            RF+  ++SS+SQVKSSVQRG RAK++EQ+P  E  +++ILPKK +  +++C + V LIC  G PLFFQ RDGP FP LR++H YP   PTM+VD GAI FVM GANIMC GFTSKGG I    EAG  V I+AE KK ALAVG+T +ST +I+   +G GV+N+H+L DGL+ T+ +D
Sbjct:    4 RFTNSEISSASQVKSSVQRGIRAKIVEQYPALEEEIDEILPKKSDFVVARCPNHVQLICHGGKPLFFQCRDGPFFPCLRLVHQYPGCWPTMQVDLGAIPFVMGGANIMCPGFTSKGGNIPQDYEAGTAVIIMAENKKQALAVGITKLSTEEIRKQKRGIGVDNVHYLNDGLWLTQTID 181
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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A9NLI5_PICSI (PUA domain-containing protein n=4 Tax=Pinidae TaxID=3313 RepID=A9NLI5_PICSI)

HSP 1 Score: 202 bits (515), Expect = 1.410e-63
Identity = 95/178 (53.37%), Postives = 135/178 (75.84%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            +FS +++SS +QVK+SVQR  R  + E++P+ EP LED+LPKK  + ++KC++ ++LI  + VPLFF  RDGP  PTLR+LH YPN+M  M+VD+GAI FV+ GANIMC G TS GG ++  + A +PV ++AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+ T QL+
Sbjct:    4 KFSSEEISSQNQVKASVQRKIRQSIAEEYPDLEPVLEDLLPKKSPLIVAKCQNHINLILVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKMQVDRGAIKFVLAGANIMCPGLTSPGGALDDDIPAESPVAVMAEGKENALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKTVQLN 181
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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A7R9XUX2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XUX2_9VIRI)

HSP 1 Score: 202 bits (515), Expect = 2.680e-63
Identity = 107/180 (59.44%), Postives = 134/180 (74.44%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGN--VTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            RF+ DDVSS SQVKSSV RG RAK+  QFPN EP L+D+LPK  +  + I KC DR+SL+     PLFFQ RDGP +PTLR+LH YP+MMP +RVDKGAI FV NGA+IMC G TS G  ++  +     V I AEGK+ ALAVG+T MS+ADI+SVNKG+GV+N+H L DGL+  +++D
Sbjct:   23 RFTYDDVSSVSQVKSSVARGIRAKIAAQFPNLEPALDDVLPKGKDTPMMIGKCTDRISLVVVRDEPLFFQFRDGPYYPTLRLLHRYPSMMPVLRVDKGAIKFVFNGADIMCPGLTSPGASMDD-VPTDTVVAIYAEGKEHALAVGLTTMSSADIRSVNKGTGVQNVHVLNDGLWKMEKVD 201
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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A1Y1I3Z2_KLENI (Pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3Z2_KLENI)

HSP 1 Score: 201 bits (511), Expect = 5.700e-63
Identity = 96/178 (53.93%), Postives = 133/178 (74.72%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            +F+ ++VS  +QVKSSVQR  R  + +Q+P  EP L+D+LPKK  + ++KC++ ++L+  + VPLFF  RDGP  PTLR+LH YP +M  +RVD+GAI FV++GANIMC G TSKGG +E  ++A  PV I AEGK++ALA+G+T MST DI  +NKG GV+N+H+L DGL+ T  LD
Sbjct:    4 KFTHEEVSGQNQVKSSVQRKIRQSIADQYPLLEPVLDDLLPKKEPLIVAKCQNHLNLVVINNVPLFFNIRDGPYMPTLRLLHQYPTVMKRVRVDRGAIKFVLSGANIMCPGLTSKGGALEDEVDAEQPVAIHAEGKELALAIGMTKMSTGDIAKINKGIGVDNIHYLNDGLWKTLHLD 181
[Close]
BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: K3WJI9_GLOUD (PUA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJI9_GLOUD)

HSP 1 Score: 200 bits (509), Expect = 1.180e-62
Identity = 94/175 (53.71%), Postives = 132/175 (75.43%), Query Frame = 1 
Query:   16 QDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            +++VS+SS+VKSS QR  RAK+LEQ+P  EPYLEDI+PKK  + ++KC++ V ++  +G PLF+ QRDGP  PTL++LH  P++M  +R DKGAI FV++GAN+MC G TS GG +   LEAG PV I+AEGK+ A+A+G+  +ST +I+  NKG G+E +HFLGD L+G   +D
Sbjct:    8 EENVSTSSKVKSSQQRTIRAKILEQYPLVEPYLEDIMPKKAPMVVAKCQNHVQIVLHEGEPLFYNQRDGPFMPTLKLLHKIPHIMKQVRADKGAIPFVLSGANVMCPGLTSAGGELPEELEAGTPVAIMAEGKEHAMAIGILTLSTEEIRKQNKGIGIEMVHFLGDDLWGLAHID 182
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BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A251KDD0_MANES (PUA domain-containing protein n=8 Tax=rosids TaxID=71275 RepID=A0A251KDD0_MANES)

HSP 1 Score: 200 bits (508), Expect = 1.630e-62
Identity = 94/178 (52.81%), Postives = 134/178 (75.28%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            +FS +DVSS +QVK+SVQR  R  + +++P  EP L+D+LPKK  + ++KC++ ++L+  + VPLFF  RDGP  PTLR+LH YPN+M  ++VD+GAI FV+ GANIMC G TS GG ++  +EA  PV I+AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+  ++LD
Sbjct:    4 KFSYEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVMVNSVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIRFVLAGANIMCPGLTSPGGALDEEVEAETPVAIMAEGKEHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERLD 181
[Close]
BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A7J9LKR6_GOSSC (PUA domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J9LKR6_GOSSC)

HSP 1 Score: 200 bits (509), Expect = 1.800e-62
Identity = 95/173 (54.91%), Postives = 129/173 (74.57%), Query Frame = 1 
Query:    4 CRFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLF 522
            CRFS +DVSS +QVK+SVQR  R  + E++P  EP L+D+LPKK  + + KC++ ++L+  + VPLFF  RDGP  PTLR+LH YPN+M   +VD+GAI FV+ GANIMC G TS GG ++  +EA  PV I+AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+
Sbjct:   13 CRFSSEDVSSQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVVKCQNHLNLVLVNSVPLFFNIRDGPYMPTLRLLHQYPNIMKKFQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLW 185
[Close]
BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Match: A0A3N7FV13_POPTR (PUA domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=A0A3N7FV13_POPTR)

HSP 1 Score: 200 bits (509), Expect = 1.800e-62
Identity = 94/178 (52.81%), Postives = 134/178 (75.28%), Query Frame = 1 
Query:    7 RFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTISKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMSTADIQSVNKGSGVENLHFLGDGLFGTKQLD 540
            RFS D+VSS +QVK+SVQR  R  + +++P  EP L+D+LPKK  + + KC++ ++L+  + VPLFF  RDGP  PTLR+LH YPN+M  ++VD+GAI FV++GANIMC G TS GG ++  ++A  PV I+AEGK+ ALA+G T MS  DI+++NKG GV+N+H+L DGL+  ++LD
Sbjct:   18 RFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVVKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERLD 195
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15.3593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE03_ECTSI2.300e-11392.13PUA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z9W5_9STRA4.490e-7965.92PUA-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2Y120_9STRA3.000e-6557.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A9NLI5_PICSI1.410e-6353.37PUA domain-containing protein n=4 Tax=Pinidae TaxI... [more]
A0A7R9XUX2_9VIRI2.680e-6359.44Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A1Y1I3Z2_KLENI5.700e-6353.93Pseudouridine synthase and archaeosine transglycos... [more]
K3WJI9_GLOUD1.180e-6253.71PUA domain-containing protein n=1 Tax=Globisporang... [more]
A0A251KDD0_MANES1.630e-6252.81PUA domain-containing protein n=8 Tax=rosids TaxID... [more]
A0A7J9LKR6_GOSSC1.800e-6254.91PUA domain-containing protein n=4 Tax=Gossypium Ta... [more]
A0A3N7FV13_POPTR1.800e-6252.81PUA domain-containing protein n=7 Tax=Pentapetalae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15contigL-elsbetiae_contig15:78629..82347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.1
Seed ortholog evalue2e-89
Seed eggNOG ortholog2880.D8LE03
Preferred nameMCTS1
KEGG koko:K02883,ko:K07575
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0016020,GO:0016032,GO:0016043,GO:0019080,GO:0019081,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042127,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0075522,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1990904,GO:2000112
EggNOG free text desc.formation of translation preinitiation complex
EggNOG OGsCOG2016@1,KOG2523@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Ec32 ortholog descriptionPUA domain
Ec32 orthologEc-05_004570.1
Exons5
Model size543
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15.3593.1prot_L-elsbetiae_contig15.3593.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15 78629..82347 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815606.993728-CDS-L-elsbetiae_contig15:78628..787331622815606.993728-CDS-L-elsbetiae_contig15:78628..78733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 78629..78733 +
1691682987.5742817-CDS-L-elsbetiae_contig15:78628..787331691682987.5742817-CDS-L-elsbetiae_contig15:78628..78733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 78629..78733 +
1622815607.0068417-CDS-L-elsbetiae_contig15:79367..795181622815607.0068417-CDS-L-elsbetiae_contig15:79367..79518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 79368..79518 +
1691682987.587712-CDS-L-elsbetiae_contig15:79367..795181691682987.587712-CDS-L-elsbetiae_contig15:79367..79518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 79368..79518 +
1622815607.0222733-CDS-L-elsbetiae_contig15:80000..801371622815607.0222733-CDS-L-elsbetiae_contig15:80000..80137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 80001..80137 +
1691682987.6001647-CDS-L-elsbetiae_contig15:80000..801371691682987.6001647-CDS-L-elsbetiae_contig15:80000..80137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 80001..80137 +
1622815607.0362594-CDS-L-elsbetiae_contig15:81627..816951622815607.0362594-CDS-L-elsbetiae_contig15:81627..81695Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 81628..81695 +
1691682987.6102583-CDS-L-elsbetiae_contig15:81627..816951691682987.6102583-CDS-L-elsbetiae_contig15:81627..81695Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 81628..81695 +
1622815607.0484679-CDS-L-elsbetiae_contig15:82265..823471622815607.0484679-CDS-L-elsbetiae_contig15:82265..82347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 82266..82347 +
1691682987.6259527-CDS-L-elsbetiae_contig15:82265..823471691682987.6259527-CDS-L-elsbetiae_contig15:82265..82347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15 82266..82347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15.3593.1

>prot_L-elsbetiae_contig15.3593.1 ID=prot_L-elsbetiae_contig15.3593.1|Name=mRNA_L-elsbetiae_contig15.3593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MCRFSQDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTI
SKCRDRVSLICCDGVPLFFQQRDGPIFPTLRILHMYPNMMPTMRVDKGAI
SFVMNGANIMCQGFTSKGGRIETPLEAGAPVCIVAEGKKVALAVGVTAMS
TADIQSVNKGSGVENLHFLGDGLFGTKQLD*
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mRNA from alignment at L-elsbetiae_contig15:78629..82347+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15.3593.1 ID=mRNA_L-elsbetiae_contig15.3593.1|Name=mRNA_L-elsbetiae_contig15.3593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3719bp|location=Sequence derived from alignment at L-elsbetiae_contig15:78629..82347+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGTAGGTTTTCCCAGGACGATGTATCCTCCTCGAGCCAGGTGAAGTC
TTCCGTCCAGCGAGGATTCCGCGCCAAGCTCCTTGAGCAGTTCCCCAACT
CCGAGGTGAGGAATGAGGAGCGAGGGCAGAGCCGGACGTGTCTGCCACAC
AAGTACGCAGCAGTAGAGAAGTACGTGCATATGGATGTAGCTGCGTGATA
CCGACCTTTCGTTCGAATGAACGAACTTTCGTTTTCGAACGGACGGCCAA
GATTTCTTTCGTTTTTCGGGAGTTTCCTCCCATGTCTTGAGAGACGCGTC
TGTGTTCCGAACTGCTGGGGCACACCCGTAGAGAACCATGAGCATAAATG
CCGATCTATGTATCCGTGCTCAAACACCCACTCGTACTATTTAGACTGCC
GCGGACCGACCCCCCATGCGTATCCTGCAAATATCGCAGGGATGGGCATC
TGCACATCACATCTGAACCCTGCTCGCGATAAAAACACGCAACAAGCAGG
CACCGCAGGAGGGGGTCCACCCCCCTCCCCCTCCTGTGTGGCCCCGGTTG
GGTCGTCTAGCTAAATAGTCATAGTGGAGGAAGGGGGCCAGTGGGGCAGA
CGACGAATAAGCCAATATTGGGTGAACAAAAAAAAAAAAAAATCGCAGGA
ACACGAAATGCACATTTTCTAGTCCCTTGCACACAGGCAGGCCCCTTGAC
CGATTGGCCCCTGCCCCCCCCCGCGCACACCTCTTCCAGCCTTACCTGGA
GGACATCCTCCCCAAGAAGGGCAACGTGACGATCTCCAAGTGCAGGGACC
GCGTGTCCCTGATTTGTTGCGACGGAGTGCCGCTCTTCTTTCAGCAGCGA
GACGGGCCCATCTTCCCCACGCTGAGGATACTGCACATGTGTGAGTTACA
AGCGCCTCTTTTTTCATGCAGAGACGGAACAGGCCCGCCCGCGGTGCCAC
TTCGCCGTTTTTGTTTTGTTTTTGTTTATCGTATGTTTTTAGCCATTTAT
TGTGGTTGAATAGCTTTTTGTGAGCGCAAAACACCACACGTGTAACTTCG
CGGTGGTGTTGCCAATGGCTATCTACAATAGTCGATGGTGTGAGCGCGTG
TCTTCGAGTGGGCATCGATCCTGTTTGCGTCGAGTTTGTTGAAGAAGCAG
TTGTGTTGGGCTTAGCAGCCGGAGCAGGCGGAGGCTGCGTCTGAATCAAG
TTTGTAGGTACGGTCGCTGGTGTACATACACCATGGAGTGTTTAAACTGC
TGTTGTATTCCTTGGGGGTTCTGGCAGTCTTTTGAGCCAATGTCACCTCA
CCTCCTCACACGGACGTTGTGTTGAACGCGCCAACACCGGAATTAGTTCT
GCGCACACGCACTCGCTTGCAGATCCCAACATGATGCCGACGATGCGAGT
CGACAAGGGGGCGATCAGCTTTGTCATGAACGGAGCCAACATTATGTGTC
AGGGTTTCACTTCCAAGGGGGGAAGAATAGAAACACCGTTGGAGGCGGGA
GCACCTGTGGTGAGTCTATCCTCGTCTATCCTCGAATATACGTAGGTGTC
AATACAAGGGCTCTTCACGGTGCGTTTTTTTTCACGGTTACATCACACCA
CACCGCGGTGCGGTGTGGTTTCGAAAATCGCCCCGCACTGTGAGATTTCG
AACAAGCGGTTAACCGCACCGTAAAAAACCGTGACTCTTGGGACAGCGGT
TAAACCGCACCGCACCGCACCGTGGGTATCTGAAAAAAAAAACCCGCATC
GTGATGAAAATATCCAGCGGTGTAAAATCGTGCGCACCAGTTTTTTCACG
AGCCGGTTTCACGTACCCCGTGCAAAAAAACGTGCATATAGCCGCCCTTA
GTTACGGGTTTTCTTCACGGTTTGTCAATACGATTGTTCAAAATACGGTT
CCGAACAAGTTATAAACCGTAGATCATGTTCCTAGATCCGGTTGATCAAA
TAATTCTACATGCGTCTGCACCGCGCTTACACTCCAGCACACACCACAAA
ACCGGGTGTGCTCCGTGCGCGCGACACCGCTGCAGCTCGCGGACCTCAAG
ATGACGGAAACCACTGCTACCAGTCATGTCGAAACTGCGGTGCCCCAGAT
TCGACCGCAGAAGCCTGAGGCTGGATCCCCCCCACACCTGACACACCAAC
TACGAACCCTCCTGTGACTGGTGCCGCTGCACCTCCCTCATTGGGACGCC
CCTCCCCCCCCGTATAAGAGCCAGTGGTCAATTTGCTGTGTTGTCCGAAC
GTCGTTTACTGTTTCTGTGTTTTGCTCGGGGTAGATATACGCTGGCTGCT
GTTACAGTCTAACCGGTAGCCGCAGTGATGCATACGAACCAAAAGCTGCA
TGTATTCGCAAGAACCGCCGTATAGGTTTTGGCCGTCAACCGTGTAGTTT
CGGCGGTTTTCCCCCACGGTGCACCGTGTGAGAGGCCGCGGTTCTGTGCG
GTTGGCTGGCTCTACGGCGTACCCTAAACCGCACCGCGTAGAAAACCGTC
GGGCGGTTACAATAACCGCACCGTGAACCCCCGTGGAATTTGACACAGCG
GTTAATTAACCGCACCGTAAGAAGCCGTGAAATTTGTGACAGCGGTTAAA
CCGCACCGCGCCGCACCGCACCGTGACATTACCAAAACTGAAAAACCACG
CCGCGGTGCGTTTCCAACACCGTACATACATAGCCCTGGTCAATACAGCA
TGCGGGGGTACTTGGGGGCGACTTATGTGGCGGGTGTTTGCTCGAAACAA
CAGAAGGCCTGGTGCGAAGAGCGCCATGGGGGGGGGGGAGGTGCGTTTTA
TTATGGGAGAATGCTTGGGCGTGATTGACTAACACACCCCAAATCACCTG
TTGTTGATAGGAGAAGTTCGCAAGGGTTTGTCGGGTGATGCTCCGCGCAG
AACAGACTCTCCGCGGAGGCGTGAGGGAGTTTTTTTCTTTTAATTGTGTG
TCCCTTTGCTTCCCCGGCGCCGCCGCTCCTCTATTGCTGCCTGCGACAGT
GTATTGTGGCAGAGGGCAAGAAGGTAGCTCTGGCGGTGGGGGTTACGGCA
ATGTCAACCGCGGACATGTGAGTTATACGTGGAAACGCGGGCCATATATA
GCCTCTCTTTCAAGGAGGAGCGGCGAGGGTCGCAAGATTCCTGCACAAGC
AGTTGAATGCTTTACGCCGCGGGAGAGTGTAGCACATCCGTATGTAGCTG
GGCAACTGCTCTTGTTTTTAAGTGCAAAATCATAGGTGGTGTTTTGTAGC
CTCTTGTACCACATGGACGGGCAGGGGGAGAGAGGGGTACGGCGTCGAGC
TTGTCAAACGCTAGTACATACACAGGCGGGAAAAAACCTCCGCATTGAAC
AACTCCAGTACCAAAGATCTCCAGTTTCTTTCCCCTTCAGATTTGTTGGA
TATGGTCCTGTGTAGAAACAAGTTAGGCCCTGAGGTCTGCCGTCCCGGCC
ATTCTCACGTGCTTGTTTCGCTCGCGGATACATACATACGGCAAGTGGGT
AAATATACTTCGAGGGTTATTTAGCAGCGTGGATGCTTGCAAAGTGTGCC
CTGCGCCCCCAACCTTGCCGCGTATCGCCTCACCACCTACGGAACCCCCG
CGTGTGGCGTCAAATCGTGTTTTTTTTCTCAAATCAGCCAATCCGTGAAC
AAGGGCAGCGGCGTGGAGAACTTGCACTTCTTGGGAGACGGGCTTTTCGG
CACGAAGCAGCTTGACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15:78629..82347+

>mRNA_L-elsbetiae_contig15.3593.1 ID=mRNA_L-elsbetiae_contig15.3593.1|Name=mRNA_L-elsbetiae_contig15.3593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig15:78629..82347+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGTAGGTTTTCCCAGGACGATGTATCCTCCTCGAGCCAGGTGAAGTC
TTCCGTCCAGCGAGGATTCCGCGCCAAGCTCCTTGAGCAGTTCCCCAACT
CCGAGATGTGTAGGTTTTCCCAGGACGATGTATCCTCCTCGAGCCAGGTG
AAGTCTTCCGTCCAGCGAGGATTCCGCGCCAAGCTCCTTGAGCAGTTCCC
CAACTCCGAGCCTTACCTGGAGGACATCCTCCCCAAGAAGGGCAACGTGA
CGATCTCCAAGTGCAGGGACCGCGTGTCCCTGATTTGTTGCGACGGAGTG
CCGCTCTTCTTTCAGCAGCGAGACGGGCCCATCTTCCCCACGCTGAGGAT
ACTGCACATGTCCTTACCTGGAGGACATCCTCCCCAAGAAGGGCAACGTG
ACGATCTCCAAGTGCAGGGACCGCGTGTCCCTGATTTGTTGCGACGGAGT
GCCGCTCTTCTTTCAGCAGCGAGACGGGCCCATCTTCCCCACGCTGAGGA
TACTGCACATGTATCCCAACATGATGCCGACGATGCGAGTCGACAAGGGG
GCGATCAGCTTTGTCATGAACGGAGCCAACATTATGTGTCAGGGTTTCAC
TTCCAAGGGGGGAAGAATAGAAACACCGTTGGAGGCGGGAGCACCTGTGA
TCCCAACATGATGCCGACGATGCGAGTCGACAAGGGGGCGATCAGCTTTG
TCATGAACGGAGCCAACATTATGTGTCAGGGTTTCACTTCCAAGGGGGGA
AGAATAGAAACACCGTTGGAGGCGGGAGCACCTGTGTGTATTGTGGCAGA
GGGCAAGAAGGTAGCTCTGGCGGTGGGGGTTACGGCAATGTCAACCGCGG
ACATTGTATTGTGGCAGAGGGCAAGAAGGTAGCTCTGGCGGTGGGGGTTA
CGGCAATGTCAACCGCGGACATCCAATCCGTGAACAAGGGCAGCGGCGTG
GAGAACTTGCACTTCTTGGGAGACGGGCTTTTCGGCACGAAGCAGCTTGA
CTGACCAATCCGTGAACAAGGGCAGCGGCGTGGAGAACTTGCACTTCTTG
GGAGACGGGCTTTTCGGCACGAAGCAGCTTGACTGA
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