prot_L-elsbetiae_contig15.3588.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15.3588.1
Unique Nameprot_L-elsbetiae_contig15.3588.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length159
Homology
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 1.490e-89
Identity = 138/159 (86.79%), Postives = 152/159 (95.60%), Query Frame = 0
Query:    1 MKFTSTVAVLACVGSAQAFVPHALPTARMSS-TTTMSAEAPASRGDFLKNAVGAVAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            MKFT TVAVLACVGSA AFVPHALP ARMS+ TTTMSAE+PASRGDFLK+A GA A+LGLAAPALAEVDNP+VPFLGGG+KIDVNNANVRAYIKL GMYP+AAGKIVSNGPYSSVS+IY+IKGL++EEK+AIKKHESRF+T+DPQAMYTIDRINNGLYR
Sbjct:    1 MKFT-TVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.910e-59
Identity = 100/159 (62.89%), Postives = 122/159 (76.73%), Query Frame = 0
Query:    1 MKFTSTVAVLACVGSAQAFVPHALPTARMSSTTTMSAEAPASRGDFLKNAV-GAVAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            MK T  + VLA    AQAFV    P+A + ST       P  R  FLK+A   AV  + +AAPALAE+DNP+VPFLGGG+K+D+NNANVRAYIK+PGMYP  AGK+VSNGPY++V+D+YNIKGL+ +EKS +KK+ESRFVTL+PQ MY IDRINNGLYR
Sbjct:    1 MKVTGAI-VLAAACGAQAFVA---PSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN)

HSP 1 Score: 161 bits (408), Expect = 2.720e-48
Identity = 81/123 (65.85%), Postives = 95/123 (77.24%), Query Frame = 0
Query:   36 SAEAPASRGDFLKNAVGAVAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            SA AP +R +FL    GAV    +AAPALA+ D   +P+LGG  KID+NNAN+R Y KLPGMYP AAGKI SNGPY SVSD+YNIKGL   EK+AIKK+ESRF+TL+P  MY IDR+NNGLYR
Sbjct:   16 SALAP-TRRNFLGKVAGAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.170e-47
Identity = 89/151 (58.94%), Postives = 102/151 (67.55%), Query Frame = 0
Query:    9 VLACVGSAQAFVPHALPTARMSSTTTMSAEAPASRGDFLKNAVGAVAV-LGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            +LA V +A AFVP        +   T +  A A R +F   A GA AV    AAPA A VD   + +LGG   +D+NNANVR Y+K+PGMYP AAGKIVSNGPY SVSD+YNI GLTS EK AIKK+ESRFV L P A Y IDRINNGLYR
Sbjct:    6 LLATVATAAAFVPQ------QAGPQTTALNAEAGRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: K0TEZ3_THAOC (PS II complex 12 kDa extrinsic protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEZ3_THAOC)

HSP 1 Score: 154 bits (390), Expect = 2.150e-45
Identity = 88/156 (56.41%), Postives = 107/156 (68.59%), Query Frame = 0
Query:    6 TVAVLACVGSAQAFVPHALPTARMSSTTTMSAEAPASRGDFLKNAVGAVAVLGLAA---PALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            T  +   + +A AF P+A P A+    T ++AEA A R  FL    GA A  G AA    A A VD   V +LGGG  +DVNNANVRAY++LPGMYP+AAGKIV++GPY SV+D+YNI GLTS EK  IKK+ES+FV  DP A Y IDR+NNGLYR
Sbjct:    3 TAIIATLISTAAAFAPNAQPAAQ----TALNAEA-ADRRSFL----GAAAAFGAAAIPAAASARVDYENVAYLGGGSTVDVNNANVRAYLRLPGMYPSAAGKIVTHGPYKSVADVYNIPGLTSAEKEVIKKYESKFVAKDPAAEYVIDRVNNGLYR 149          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.970e-44
Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 0
Query:   59 LAAP--ALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            LAAP  A+A+VD   +P+LGG EKID+NNANVR Y KLPGMYPNAA KI SNGPY SVSD+Y+IKGL+ +EKS IKK+ESR +TL+P AMY IDR NNGLYR
Sbjct:   52 LAAPFAAMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A7S1Z9N8_TRICV (PS II complex 12 kDa extrinsic protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z9N8_TRICV)

HSP 1 Score: 150 bits (378), Expect = 1.470e-43
Identity = 88/153 (57.52%), Postives = 109/153 (71.24%), Query Frame = 0
Query:    8 AVLACVGS-AQAFVPHALPTARMSSTTTMSAEAPASRGDFLKNAVGA-VAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            AVLA V + A AF P+  P    +S+T ++AEA  SR DFL  A+ A VA +  AAPA A  D   + FLGG   +D+NNANVR Y+K+PGMYP AAGKIV+NGPY +VSDIY+I GLT+ EK  +KK+ESRFV L P A + IDR+NNGLYR
Sbjct:    4 AVLASVVAVAAAFAPNQAP----ASSTALNAEA--SRKDFLAGAMAAGVAAVAGAAPANAVRDYENIGFLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVTNGPYKAVSDIYSIPGLTAGEKEVMKKYESRFVALPPSADFVIDRVNNGLYR 150          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A7S4MT81_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MT81_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.140e-43
Identity = 91/162 (56.17%), Postives = 108/162 (66.67%), Query Frame = 0
Query:    1 MKFTSTVAVLACVGSAQAFVP--HALPTARMSSTTTMSAEAPASRGDFLKNA--VGAVAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            MK     + LAC   A AF P  + +P     +TT ++AEA  SR +FL  A   GA  V G AAPA A  D   V FLGG + +DVNNANVR Y+K+PGMYP AAGKI +NGPY SV+DIYNI GLT++EK  +KK+ESRF  L P A Y IDRINNGLYR
Sbjct:    1 MKLAVLASTLAC---AAAFAPSQNGVP-----ATTALNAEA--SRKEFLAGAFATGAAVVAG-AAPAYAIRDYDNVAFLGGSQTVDVNNANVRVYLKMPGMYPAAAGKIAANGPYKSVADIYNISGLTAKEKEIMKKYESRFTALPPSADYVIDRINNGLYR 151          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.400e-42
Identity = 76/127 (59.84%), Postives = 91/127 (71.65%), Query Frame = 0
Query:   32 TTTMSAEAPASRGDFLKNAVGAVAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            +T ++AEA   R  F   A  A+   G+AAPA A VD   + +LGG   +D+NNANVR Y+K+PGMYP  AGKIVSNGPY+SVSD+YNIKGLTS EK  +KK+ESRF    P A Y IDRINNGLYR
Sbjct:   25 STALNAEA-GRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150          
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Match: A0A7S2TDD2_PROMC (PS II complex 12 kDa extrinsic protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TDD2_PROMC)

HSP 1 Score: 145 bits (367), Expect = 3.820e-42
Identity = 75/128 (58.59%), Postives = 90/128 (70.31%), Query Frame = 0
Query:   32 TTTMSAEAPASRGDFLKNAVGAVA-VLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTIDRINNGLYR 158
            TT+ +  A A R +F   A  A A V+G AAPA A +D   + +LGG   +D+NNANVRAY+K+PGMYP  AGKIVSNGPY+SV DIY+IKGLTS E   +KK+E RFV   P   Y IDRINNGLYR
Sbjct:    4 TTSTALNAEAGRREFFSKAAAATAAVVGAAAPANAVIDYENIGYLGGSSIVDLNNANVRAYLKMPGMYPTVAGKIVSNGPYASVKDIYSIKGLTSAEADVLKKYEDRFVAKTPSPDYVIDRINNGLYR 131          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15.3588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9E0_ECTSI1.490e-8986.79PS II complex 12 kDa extrinsic protein n=2 Tax=Ect... [more]
A0A836CCI8_9STRA1.910e-5962.89PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
F0YKI8_AURAN2.720e-4865.85PS II complex 12 kDa extrinsic protein n=1 Tax=Aur... [more]
A0A6U4G1G5_9STRA1.170e-4758.94PS II complex 12 kDa extrinsic protein n=1 Tax=Min... [more]
K0TEZ3_THAOC2.150e-4556.41PS II complex 12 kDa extrinsic protein n=1 Tax=Tha... [more]
A0A7S1XZL8_9STRA3.970e-4471.57PS II complex 12 kDa extrinsic protein n=1 Tax=Pha... [more]
A0A7S1Z9N8_TRICV1.470e-4357.52PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
A0A7S4MT81_9STRA2.140e-4356.17PS II complex 12 kDa extrinsic protein n=1 Tax=Odo... [more]
A0A7S2GXA3_9STRA2.400e-4259.84PS II complex 12 kDa extrinsic protein n=1 Tax=Hel... [more]
A0A7S2TDD2_PROMC3.820e-4258.59PS II complex 12 kDa extrinsic protein n=1 Tax=Pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.320coord: 65..148
e-value: 5.9E-27
score: 95.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.614
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 69..158
IPR010527Photosystem II PsbU, oxygen evolving complexPFAMPF06514PsbUcoord: 78..157
e-value: 7.9E-29
score: 99.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15contigL-elsbetiae_contig15:57474..62003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15.3588.1mRNA_L-elsbetiae_contig15.3588.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15 57420..62586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15.3588.1 ID=prot_L-elsbetiae_contig15.3588.1|Name=mRNA_L-elsbetiae_contig15.3588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp
MKFTSTVAVLACVGSAQAFVPHALPTARMSSTTTMSAEAPASRGDFLKNA
VGAVAVLGLAAPALAEVDNPIVPFLGGGEKIDVNNANVRAYIKLPGMYPN
AAGKIVSNGPYSSVSDIYNIKGLTSEEKSAIKKHESRFVTLDPQAMYTID
RINNGLYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010527PSII_PsbU