mRNA_L-elsbetiae_contig1499.3576.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: D7FMS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS8_ECTSI) HSP 1 Score: 343 bits (879), Expect = 5.480e-114 Identity = 235/298 (78.86%), Postives = 257/298 (86.24%), Query Frame = 2 Query: 35 MGSSSMEYRDESSSRASSAGRRRATREMFLCSTATVRSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARKSTSKSLSSSTAHAPMAESG 928 M S + E+ DESSSRASSA RR TRE+ LCSTAT E DDD+L RVTHLRL NKGIS+LDN +VFDAC SLKVLYLYDNCVESLKGLEKLQ++EQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA+QRL RGQ F IDQAS++G+KDSLV+LDASGNGMGGTEIE +L LYRLETLNLA+ND+ EMAQVVDLVSSLE LR +DLRGN VSRMAKYFERAVTRCGD LATLDGKPVH QHR MLQRLDRHKR+EARKS +K+L+ S HAP+AE G Sbjct: 1 MDSITGEFSDESSSRASSASRRGTTRELALCSTATXXXX-XESDDDYLSRVTHLRLQNKGISSLDNPDVFDACHSLKVLYLYDNCVESLKGLEKLQRIEQLFADNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARQRLQRGQCFTIDQASIDGIKDSLVLLDASGNGMGGTEIEGILHLYRLETLNLAENDIQEMAQVVDLVSSLEALRDLDLRGNIVSRMAKYFERAVTRCGDLLATLDGKPVHAQHRSMLQRLDRHKRSEARKSAAKTLARSNTHAPIAEPG 297
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: A0A2D4BJ87_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ87_PYTIN) HSP 1 Score: 81.3 bits (199), Expect = 9.560e-14 Identity = 109/256 (42.58%), Postives = 149/256 (58.20%), Query Frame = 2 Query: 173 FLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPL--LDLYR-LETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHK----RAEARKSTSKSLSSSTAHAPMA 919 +L R+THL L+ + F CP+LKVLYLYDN +E+++GL++++Q+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QRL F+ + +S+ + SL VL+ + +E + L+L R L+ L+L+ N + V LV SL +L +DL N V+ KY E+ +T LA LD + + R M+Q HK + + + S + SST AP A Sbjct: 44 YLKRITHLTLNGNDKKVVKRMQNFHYCPNLKVLYLYDNEIEAIEGLDRVRQLTHLHLQNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLSPSSTFSFEPSSIQALCRSLRVLN-----LANCRVESVRALELLRGLQVLDLSKNLFASLEDVFSLVGSLSVLVDLDLTLNPVTTQPKYREKVITFSSPRLALLDKRDIDANQRRMMQSHMAHKFRKRQEQEQASNQEPALSSTLQAPSA 294
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: A0A8K1CMN9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMN9_PYTOL) HSP 1 Score: 80.9 bits (198), Expect = 1.290e-13 Identity = 106/223 (47.53%), Postives = 139/223 (62.33%), Query Frame = 2 Query: 167 DDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQ 835 + +L RVTHL L+ + CP+LKVLYLYDN ++ L+GL+ + Q+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L F+ ++ ++ + SL VL+ S + T+ LL L L+ L+L+ N + E+ V L+ L L +DLR N V+ + KY E+A+T LA LD K + R M+Q Sbjct: 38 EHYLKRVTHLTLNGSEKKVIKRIQHLQRCPNLKVLYLYDNEIQVLEGLDGVSQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPSTVFSFEEETIRALSRSLRVLNLSNCHITATQ--SLLGLRALQQLDLSKNLIEELEDVFALLGGLYSLTELDLRSNPVTNIPKYREKAITFSSPRLALLDKKDIDMNQRRMMQ 258
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001E1CF726 (uncharacterized protein LOC123514193 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CF726) HSP 1 Score: 81.3 bits (199), Expect = 1.740e-13 Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 2 Query: 167 DDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRA 859 D++L RVTHL L NKGI+ L++ AC V YL N + L L L+ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V QRLP G +D ++ V+D+L VLD GN + TE+ + L RL+ L ADNDL ++ + ++ L L+ + L GN V+ +Y + L TLD KPV + R L + DR++ A Sbjct: 91 DNYLARVTHLHLQNKGITHLEDVA---ACGGALVAYLQHNHLTRLTNLRYLRHLRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPRGLTELH--VQDQRLPPGDALILDPHALAVVQDTLRVLDVRGNRL--TEMGAVGLLGRLQVLRAADNDLSSLSHLGTVLGRLAHLKHLHLIGNPVTAHRRYRPAVILAASPTLETLDDKPVTARSRDFLVQADRYRAA 314
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001CFA13B0 (protein phosphatase 1 regulatory subunit 42 isoform X3 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA13B0) HSP 1 Score: 79.3 bits (194), Expect = 1.800e-13 Identity = 110/244 (45.08%), Postives = 148/244 (60.66%), Query Frame = 2 Query: 101 RATREMFLCSTATVRSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMML 832 R T ++ S+ V++RR+E +++L ++THL NK I +D+ +V C SL VLYLYDNC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ Q+LP G++ D ++ + SL+VL+AS NG+ E++ L+ L L +DN L ++ +V ++ L+ +DL N V KY +R + L LDGK V+ R L Sbjct: 3 RLTIDLIAKSSIHVKNRRDEPLENYLKKLTHLNFSNKNIDEIDDLSV---CRSLTVLYLYDNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIENQQLPPGEKLLFDPRTLQSLSKSLLVLNASSNGID--ELKELVILENLTHFAASDNQLRDLKEVEHVLKKWHSLQRLDLIRNPVCIKPKYRDRIIV-ASKHLEFLDGKEVNQMAREFL 240
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001CFA5956 (protein phosphatase 1 regulatory subunit 42 isoform X1 n=2 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA5956) HSP 1 Score: 79.3 bits (194), Expect = 4.210e-13 Identity = 110/244 (45.08%), Postives = 148/244 (60.66%), Query Frame = 2 Query: 101 RATREMFLCSTATVRSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMML 832 R T ++ S+ V++RR+E +++L ++THL NK I +D+ +V C SL VLYLYDNC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ Q+LP G++ D ++ + SL+VL+AS NG+ E++ L+ L L +DN L ++ +V ++ L+ +DL N V KY +R + L LDGK V+ R L Sbjct: 3 RLTIDLIAKSSIHVKNRRDEPLENYLKKLTHLNFSNKNIDEIDDLSV---CRSLTVLYLYDNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIENQQLPPGEKLLFDPRTLQSLSKSLLVLNASSNGID--ELKELVILENLTHFAASDNQLRDLKEVEHVLKKWHSLQRLDLIRNPVCIKPKYRDRIIV-ASKHLEFLDGKEVNQMAREFL 240
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001E1D2461 (protein phosphatase 1 regulatory subunit 42-like isoform X11 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2461) HSP 1 Score: 78.2 bits (191), Expect = 1.340e-12 Identity = 108/243 (44.44%), Postives = 143/243 (58.85%), Query Frame = 2 Query: 143 RSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARK 871 + +R+E +L R+THL L NKGI + + C +L VLYLYDN + + L + Q + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q LP G++ D S+ + SL VL+ SGN + I+ L L +L DN L +M ++ ++ L +DL GN + AKY +R + L TLDGK + + L+ +K + +K Sbjct: 42 KKKRDETMHQYLKRLTHLYLENKGIDEVGDD--MSLCRNLSVLYLYDNQLTHIPSLHQNQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQALPPGEKLLFDPRSIRAISGSLKVLNVSGNNLDS--IKDLECLNQLSHFLAIDNQLNDMKELAHVLGQWYYLNRLDLMGNPLCHKAKYRDRVIVMAKQ-LDTLDGKQISETAKQFLKNWHANKETQRQK 279
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001E1D4F86 (protein phosphatase 1 regulatory subunit 42-like isoform X1 n=16 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4F86) HSP 1 Score: 78.2 bits (191), Expect = 1.660e-12 Identity = 108/243 (44.44%), Postives = 143/243 (58.85%), Query Frame = 2 Query: 143 RSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARK 871 + +R+E +L R+THL L NKGI + + C +L VLYLYDN + + L + Q + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q LP G++ D S+ + SL VL+ SGN + I+ L L +L DN L +M ++ ++ L +DL GN + AKY +R + L TLDGK + + L+ +K + +K Sbjct: 42 KKKRDETMHQYLKRLTHLYLENKGIDEVGDD--MSLCRNLSVLYLYDNQLTHIPSLHQNQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQALPPGEKLLFDPRSIRAISGSLKVLNVSGNNLDS--IKDLECLNQLSHFLAIDNQLNDMKELAHVLGQWYYLNRLDLMGNPLCHKAKYRDRVIVMAKQ-LDTLDGKQISETAKQFLKNWHANKETQRQK 279
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: A0A225VT80_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VT80_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.230e-12 Identity = 119/259 (45.95%), Postives = 150/259 (57.92%), Query Frame = 2 Query: 152 RNECDDDFLVRVTHLRLHNKGISTLDNANV---------FDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARKSTSKSLSSST 901 R+E + RVTHL L+ TL ++ CP+LKVLYLYDN VE++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A Q +P F+ ++ S+ + DSL VLD S M T+ LL LE L L+ N + ++ ++ LV + L +DLRGN V+ AKY E+ +T LA LD K V R M+Q HK +S+S+ S S+ Sbjct: 32 RHEQLSHYFKRVTHLALNGDASKTLKGSDKKGVIRKIKNLHHCPNLKVLYLYDNEVETIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANQNIPVDLHFSFEEDSMRTLADSLRVLDLSNCCMVSTKSVTLL--RSLEHLYLSKNLITDLEEIFALVGGITSLVELDLRGNPVTATAKYREQTITFSSARLALLDKKGVDPNQRRMMQTHLAHKYRNRLESSSRRQSPSS 288
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI0008F9AEBF (protein phosphatase 1 regulatory subunit 42-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9AEBF) HSP 1 Score: 74.7 bits (182), Expect = 7.590e-12 Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 473 VAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFER--AVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARKST--SKSLSSSTAHAP 913 + QRLP G D V G++ L L+ +GN + + + L +LE L+ DN L ++Q+ D ++ L LR++DLRGN +++ +Y E+ AV +C D L DGK V +R+ +Q L++ K+AE + + SK + S H P Sbjct: 37 IQNQRLPPGGMMYFDPRCVTGIQICLKDLNVAGNNL--IVLTDFVGLNKLEKLDATDNKLENLSQIRDDLAELSRLRSLDLRGNPITKEIRYREKIVAVLQCVDNL---DGKTVTDMNRIFIQNLEKCKKAEKKPAIEFSKDIKSLAEHLP 182 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1499.3576.1 >prot_L-elsbetiae_contig1499.3576.1 ID=prot_L-elsbetiae_contig1499.3576.1|Name=mRNA_L-elsbetiae_contig1499.3576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp MGSSSMEYRDESSSRASSAGRRRATREMFLCSTATVRSRRNECDDDFLVRback to top mRNA from alignment at L-elsbetiae_contig1499:14036..18139- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1499.3576.1 ID=mRNA_L-elsbetiae_contig1499.3576.1|Name=mRNA_L-elsbetiae_contig1499.3576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4104bp|location=Sequence derived from alignment at L-elsbetiae_contig1499:14036..18139- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1499:14036..18139- >mRNA_L-elsbetiae_contig1499.3576.1 ID=mRNA_L-elsbetiae_contig1499.3576.1|Name=mRNA_L-elsbetiae_contig1499.3576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1794bp|location=Sequence derived from alignment at L-elsbetiae_contig1499:14036..18139- (Laminarionema elsbetiae ELsaHSoW15)back to top |