mRNA_L-elsbetiae_contig1499.3576.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1499.3576.1
Unique NamemRNA_L-elsbetiae_contig1499.3576.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: D7FMS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS8_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 5.480e-114
Identity = 235/298 (78.86%), Postives = 257/298 (86.24%), Query Frame = 2
Query:   35 MGSSSMEYRDESSSRASSAGRRRATREMFLCSTATVRSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARKSTSKSLSSSTAHAPMAESG 928
            M S + E+ DESSSRASSA RR  TRE+ LCSTAT      E DDD+L RVTHLRL NKGIS+LDN +VFDAC SLKVLYLYDNCVESLKGLEKLQ++EQ     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA+QRL RGQ F IDQAS++G+KDSLV+LDASGNGMGGTEIE +L LYRLETLNLA+ND+ EMAQVVDLVSSLE LR +DLRGN VSRMAKYFERAVTRCGD LATLDGKPVH QHR MLQRLDRHKR+EARKS +K+L+ S  HAP+AE G
Sbjct:    1 MDSITGEFSDESSSRASSASRRGTTRELALCSTATXXXX-XESDDDYLSRVTHLRLQNKGISSLDNPDVFDACHSLKVLYLYDNCVESLKGLEKLQRIEQLFADNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARQRLQRGQCFTIDQASIDGIKDSLVLLDASGNGMGGTEIEGILHLYRLETLNLAENDIQEMAQVVDLVSSLEALRDLDLRGNIVSRMAKYFERAVTRCGDLLATLDGKPVHAQHRSMLQRLDRHKRSEARKSAAKTLARSNTHAPIAEPG 297          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: A0A2D4BJ87_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ87_PYTIN)

HSP 1 Score: 81.3 bits (199), Expect = 9.560e-14
Identity = 109/256 (42.58%), Postives = 149/256 (58.20%), Query Frame = 2
Query:  173 FLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPL--LDLYR-LETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHK----RAEARKSTSKSLSSSTAHAPMA 919
            +L R+THL L+      +     F  CP+LKVLYLYDN +E+++GL++++Q+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   QRL     F+ + +S+  +  SL VL+     +    +E +  L+L R L+ L+L+ N    +  V  LV SL +L  +DL  N V+   KY E+ +T     LA LD + +    R M+Q    HK    + + + S  +   SST  AP A
Sbjct:   44 YLKRITHLTLNGNDKKVVKRMQNFHYCPNLKVLYLYDNEIEAIEGLDRVRQLTHLHLQNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLSPSSTFSFEPSSIQALCRSLRVLN-----LANCRVESVRALELLRGLQVLDLSKNLFASLEDVFSLVGSLSVLVDLDLTLNPVTTQPKYREKVITFSSPRLALLDKRDIDANQRRMMQSHMAHKFRKRQEQEQASNQEPALSSTLQAPSA 294          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: A0A8K1CMN9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMN9_PYTOL)

HSP 1 Score: 80.9 bits (198), Expect = 1.290e-13
Identity = 106/223 (47.53%), Postives = 139/223 (62.33%), Query Frame = 2
Query:  167 DDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQ 835
            + +L RVTHL L+      +        CP+LKVLYLYDN ++ L+GL+ + Q+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L     F+ ++ ++  +  SL VL+ S   +  T+   LL L  L+ L+L+ N + E+  V  L+  L  L  +DLR N V+ + KY E+A+T     LA LD K +    R M+Q
Sbjct:   38 EHYLKRVTHLTLNGSEKKVIKRIQHLQRCPNLKVLYLYDNEIQVLEGLDGVSQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPSTVFSFEEETIRALSRSLRVLNLSNCHITATQ--SLLGLRALQQLDLSKNLIEELEDVFALLGGLYSLTELDLRSNPVTNIPKYREKAITFSSPRLALLDKKDIDMNQRRMMQ 258          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001E1CF726 (uncharacterized protein LOC123514193 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CF726)

HSP 1 Score: 81.3 bits (199), Expect = 1.740e-13
Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 2
Query:  167 DDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRA 859
            D++L RVTHL L NKGI+ L++     AC    V YL  N +  L  L  L+ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           V  QRLP G    +D  ++  V+D+L VLD  GN +  TE+  +  L RL+ L  ADNDL  ++ +  ++  L  L+ + L GN V+   +Y    +      L TLD KPV  + R  L + DR++ A
Sbjct:   91 DNYLARVTHLHLQNKGITHLEDVA---ACGGALVAYLQHNHLTRLTNLRYLRHLRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPRGLTELH--VQDQRLPPGDALILDPHALAVVQDTLRVLDVRGNRL--TEMGAVGLLGRLQVLRAADNDLSSLSHLGTVLGRLAHLKHLHLIGNPVTAHRRYRPAVILAASPTLETLDDKPVTARSRDFLVQADRYRAA 314          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001CFA13B0 (protein phosphatase 1 regulatory subunit 42 isoform X3 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA13B0)

HSP 1 Score: 79.3 bits (194), Expect = 1.800e-13
Identity = 110/244 (45.08%), Postives = 148/244 (60.66%), Query Frame = 2
Query:  101 RATREMFLCSTATVRSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMML 832
            R T ++   S+  V++RR+E  +++L ++THL   NK I  +D+ +V   C SL VLYLYDNC               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+  Q+LP G++   D  ++  +  SL+VL+AS NG+   E++ L+ L  L     +DN L ++ +V  ++     L+ +DL  N V    KY +R +      L  LDGK V+   R  L
Sbjct:    3 RLTIDLIAKSSIHVKNRRDEPLENYLKKLTHLNFSNKNIDEIDDLSV---CRSLTVLYLYDNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIENQQLPPGEKLLFDPRTLQSLSKSLLVLNASSNGID--ELKELVILENLTHFAASDNQLRDLKEVEHVLKKWHSLQRLDLIRNPVCIKPKYRDRIIV-ASKHLEFLDGKEVNQMAREFL 240          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001CFA5956 (protein phosphatase 1 regulatory subunit 42 isoform X1 n=2 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA5956)

HSP 1 Score: 79.3 bits (194), Expect = 4.210e-13
Identity = 110/244 (45.08%), Postives = 148/244 (60.66%), Query Frame = 2
Query:  101 RATREMFLCSTATVRSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMML 832
            R T ++   S+  V++RR+E  +++L ++THL   NK I  +D+ +V   C SL VLYLYDNC               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+  Q+LP G++   D  ++  +  SL+VL+AS NG+   E++ L+ L  L     +DN L ++ +V  ++     L+ +DL  N V    KY +R +      L  LDGK V+   R  L
Sbjct:    3 RLTIDLIAKSSIHVKNRRDEPLENYLKKLTHLNFSNKNIDEIDDLSV---CRSLTVLYLYDNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIENQQLPPGEKLLFDPRTLQSLSKSLLVLNASSNGID--ELKELVILENLTHFAASDNQLRDLKEVEHVLKKWHSLQRLDLIRNPVCIKPKYRDRIIV-ASKHLEFLDGKEVNQMAREFL 240          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001E1D2461 (protein phosphatase 1 regulatory subunit 42-like isoform X11 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2461)

HSP 1 Score: 78.2 bits (191), Expect = 1.340e-12
Identity = 108/243 (44.44%), Postives = 143/243 (58.85%), Query Frame = 2
Query:  143 RSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARK 871
            + +R+E    +L R+THL L NKGI  + +      C +L VLYLYDN +  +  L + Q +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   Q LP G++   D  S+  +  SL VL+ SGN +    I+ L  L +L      DN L +M ++  ++     L  +DL GN +   AKY +R +      L TLDGK +    +  L+    +K  + +K
Sbjct:   42 KKKRDETMHQYLKRLTHLYLENKGIDEVGDD--MSLCRNLSVLYLYDNQLTHIPSLHQNQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQALPPGEKLLFDPRSIRAISGSLKVLNVSGNNLDS--IKDLECLNQLSHFLAIDNQLNDMKELAHVLGQWYYLNRLDLMGNPLCHKAKYRDRVIVMAKQ-LDTLDGKQISETAKQFLKNWHANKETQRQK 279          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI001E1D4F86 (protein phosphatase 1 regulatory subunit 42-like isoform X1 n=16 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4F86)

HSP 1 Score: 78.2 bits (191), Expect = 1.660e-12
Identity = 108/243 (44.44%), Postives = 143/243 (58.85%), Query Frame = 2
Query:  143 RSRRNECDDDFLVRVTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARK 871
            + +R+E    +L R+THL L NKGI  + +      C +L VLYLYDN +  +  L + Q +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   Q LP G++   D  S+  +  SL VL+ SGN +    I+ L  L +L      DN L +M ++  ++     L  +DL GN +   AKY +R +      L TLDGK +    +  L+    +K  + +K
Sbjct:   42 KKKRDETMHQYLKRLTHLYLENKGIDEVGDD--MSLCRNLSVLYLYDNQLTHIPSLHQNQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQALPPGEKLLFDPRSIRAISGSLKVLNVSGNNLDS--IKDLECLNQLSHFLAIDNQLNDMKELAHVLGQWYYLNRLDLMGNPLCHKAKYRDRVIVMAKQ-LDTLDGKQISETAKQFLKNWHANKETQRQK 279          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: A0A225VT80_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VT80_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.230e-12
Identity = 119/259 (45.95%), Postives = 150/259 (57.92%), Query Frame = 2
Query:  152 RNECDDDFLVRVTHLRLHNKGISTLDNANV---------FDACPSLKVLYLYDNCVESLKGLEKLQQMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARKSTSKSLSSST 901
            R+E    +  RVTHL L+     TL  ++             CP+LKVLYLYDN VE++           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A Q +P    F+ ++ S+  + DSL VLD S   M  T+   LL    LE L L+ N + ++ ++  LV  +  L  +DLRGN V+  AKY E+ +T     LA LD K V    R M+Q    HK     +S+S+  S S+
Sbjct:   32 RHEQLSHYFKRVTHLALNGDASKTLKGSDKKGVIRKIKNLHHCPNLKVLYLYDNEVETIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANQNIPVDLHFSFEEDSMRTLADSLRVLDLSNCCMVSTKSVTLL--RSLEHLYLSKNLITDLEEIFALVGGITSLVELDLRGNPVTATAKYREQTITFSSARLALLDKKGVDPNQRRMMQTHLAHKYRNRLESSSRRQSPSS 288          
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Match: UPI0008F9AEBF (protein phosphatase 1 regulatory subunit 42-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9AEBF)

HSP 1 Score: 74.7 bits (182), Expect = 7.590e-12
Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  473 VAKQRLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLNLADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFER--AVTRCGDGLATLDGKPVHTQHRMMLQRLDRHKRAEARKST--SKSLSSSTAHAP 913
            +  QRLP G     D   V G++  L  L+ +GN +    +   + L +LE L+  DN L  ++Q+ D ++ L  LR++DLRGN +++  +Y E+  AV +C D L   DGK V   +R+ +Q L++ K+AE + +   SK + S   H P
Sbjct:   37 IQNQRLPPGGMMYFDPRCVTGIQICLKDLNVAGNNL--IVLTDFVGLNKLEKLDATDNKLENLSQIRDDLAELSRLRSLDLRGNPITKEIRYREKIVAVLQCVDNL---DGKTVTDMNRIFIQNLEKCKKAEKKPAIEFSKDIKSLAEHLP 182          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1499.3576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FMS8_ECTSI5.480e-11478.86Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A2D4BJ87_PYTIN9.560e-1442.58Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1CMN9_PYTOL1.290e-1347.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI001E1CF7261.740e-1343.72uncharacterized protein LOC123514193 n=1 Tax=Portu... [more]
UPI001CFA13B01.800e-1345.08protein phosphatase 1 regulatory subunit 42 isofor... [more]
UPI001CFA59564.210e-1345.08protein phosphatase 1 regulatory subunit 42 isofor... [more]
UPI001E1D24611.340e-1244.44protein phosphatase 1 regulatory subunit 42-like i... [more]
UPI001E1D4F861.660e-1244.44protein phosphatase 1 regulatory subunit 42-like i... [more]
A0A225VT80_9STRA5.230e-1245.95Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
UPI0008F9AEBF7.590e-1233.77protein phosphatase 1 regulatory subunit 42-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1499contigL-elsbetiae_contig1499:14036..18139 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.4
Seed ortholog evalue5.5e-92
Seed eggNOG ortholog2880.D7FMS8
KEGG koko:K17579
Hectar predicted targeting categoryother localisation
EggNOG OGs2CZ6V@1,2S8SX@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko04812
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-21_000290.1
Exons7
Model size931
Cds size897
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1499.3576.1prot_L-elsbetiae_contig1499.3576.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1499 14036..18105 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815605.584935-CDS-L-elsbetiae_contig1499:14035..141981622815605.584935-CDS-L-elsbetiae_contig1499:14035..14198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 14036..14198 -
1691682986.7168021-CDS-L-elsbetiae_contig1499:14035..141981691682986.7168021-CDS-L-elsbetiae_contig1499:14035..14198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 14036..14198 -
1622815605.5996487-CDS-L-elsbetiae_contig1499:14489..145901622815605.5996487-CDS-L-elsbetiae_contig1499:14489..14590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 14490..14590 -
1691682986.7291112-CDS-L-elsbetiae_contig1499:14489..145901691682986.7291112-CDS-L-elsbetiae_contig1499:14489..14590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 14490..14590 -
1622815605.61379-CDS-L-elsbetiae_contig1499:15004..151301622815605.61379-CDS-L-elsbetiae_contig1499:15004..15130Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 15005..15130 -
1691682986.743347-CDS-L-elsbetiae_contig1499:15004..151301691682986.743347-CDS-L-elsbetiae_contig1499:15004..15130Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 15005..15130 -
1622815605.6243331-CDS-L-elsbetiae_contig1499:15490..156291622815605.6243331-CDS-L-elsbetiae_contig1499:15490..15629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 15491..15629 -
1691682986.7520792-CDS-L-elsbetiae_contig1499:15490..156291691682986.7520792-CDS-L-elsbetiae_contig1499:15490..15629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 15491..15629 -
1622815605.6367636-CDS-L-elsbetiae_contig1499:16023..161601622815605.6367636-CDS-L-elsbetiae_contig1499:16023..16160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 16024..16160 -
1691682986.7600374-CDS-L-elsbetiae_contig1499:16023..161601691682986.7600374-CDS-L-elsbetiae_contig1499:16023..16160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 16024..16160 -
1622815605.650389-CDS-L-elsbetiae_contig1499:16611..167291622815605.650389-CDS-L-elsbetiae_contig1499:16611..16729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 16612..16729 -
1691682986.7688305-CDS-L-elsbetiae_contig1499:16611..167291691682986.7688305-CDS-L-elsbetiae_contig1499:16611..16729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 16612..16729 -
1622815605.6619997-CDS-L-elsbetiae_contig1499:17992..181051622815605.6619997-CDS-L-elsbetiae_contig1499:17992..18105Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 17993..18105 -
1691682986.7810256-CDS-L-elsbetiae_contig1499:17992..181051691682986.7810256-CDS-L-elsbetiae_contig1499:17992..18105Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1499 17993..18105 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815605.677784-UTR-L-elsbetiae_contig1499:18105..181391622815605.677784-UTR-L-elsbetiae_contig1499:18105..18139Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1499 18106..18139 -
1691682986.79501-UTR-L-elsbetiae_contig1499:18105..181391691682986.79501-UTR-L-elsbetiae_contig1499:18105..18139Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1499 18106..18139 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1499.3576.1

>prot_L-elsbetiae_contig1499.3576.1 ID=prot_L-elsbetiae_contig1499.3576.1|Name=mRNA_L-elsbetiae_contig1499.3576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp
MGSSSMEYRDESSSRASSAGRRRATREMFLCSTATVRSRRNECDDDFLVR
VTHLRLHNKGISTLDNANVFDACPSLKVLYLYDNCVESLKGLEKLQQMEQ
LYVDNNLLATVQGTLPYRRLTKLHLSGNNISTLSGLESANCLEELHVAKQ
RLPRGQRFAIDQASVNGVKDSLVVLDASGNGMGGTEIEPLLDLYRLETLN
LADNDLGEMAQVVDLVSSLEMLRTIDLRGNAVSRMAKYFERAVTRCGDGL
ATLDGKPVHTQHRMMLQRLDRHKRAEARKSTSKSLSSSTAHAPMAESG*
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mRNA from alignment at L-elsbetiae_contig1499:14036..18139-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1499.3576.1 ID=mRNA_L-elsbetiae_contig1499.3576.1|Name=mRNA_L-elsbetiae_contig1499.3576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4104bp|location=Sequence derived from alignment at L-elsbetiae_contig1499:14036..18139- (Laminarionema elsbetiae ELsaHSoW15)
GTGTGGCTGACTGCGGTAGCTATTCTCCACCACCATGGGCTCCAGCAGTA TGGAATATCGCGACGAAAGCTCGTCACGGGCCTCCTCAGCTGGTCGGAGA CGTGCTACCCGCGAAATGTTCTTGTGTAGTACAGCCACGGTCAGGAGGTG AGCGCACACCCCGTACGTGCCAAAAAATAATGTGGTTCCAGATCATAACG CACCGACGCGAGGATCACCGCCGTTTGGCAGATTTAAACATCTCCCTGTA CACCGTGTACACCAATGACACATCGTCTGTGTAGCGGAACTGCTGACGGC CACAAAAAAAGGAGATGGTGTCTAAAATATGACGGGAGAGGTTTTTCGAC AGCCGCTGGATCGGCTATCTATCTAGAACATAAGACTAGACTAGTCTATC TCTAAATAGGATAGGAATAATAGGCCAAGGTGCATGTAACATCATCGTCA TCAATCAGCTGTATCTTGTGTAGATAGTACCCGCTGGTTAGTGTGTTTGC ACACCCGAGGTGCGGTGTGTGTCAGTATCAGCTACAAATGGTACGAAGTA AATACACTATCTAATACTCCGTAGCTTGTAGATTGCACCCACGACAAGCA TCCTCTCGCAGCCCGACGCATGAGATGCATGTGATACGTTATTACGTGAT GCAGGTAAATGTATGTGATGCATGCATATGTATGTCATGTAAATACGTAC ACGTTGCCAAGGAAGTCGCCATCAAAACAGAGTGTGATACTCGACATATT CAATCGATCACTGCTTCGTGTCTATCTAGATAGTCTAGAAGACGTCTAGA CATACCGAACCCTAGTCTGGGGAATTTCAAGATCTTGAAAACAAGAAACT CTTATTTTGGCCGAGGAGGCTCGCGGCTTACTAGCCGCCCAAAACCGAGT AAGGGTTACTTCGCCCACAGGAAATATGCCGCCAAAGCACGCGTTTTTGT TCCTATGTCGAGCCGGCATCCCGTTCGCGGAGTATTGTTTTGTTTATCGC ATGCAAACATACTACATAAATAATCGGTCAGTGCCTGCCCCCCCTTCATA CATACATACTCTGACACACCCTGCTGTGGGGAGGTATGTATCTGATATGC GATCCTATGTGTGTGTGTGGGGGGGGGCAGCGGAACCTGAATCTTGGGGT GCCGCCCCCACCCGCAAACCACTCGGCGATGTTATTATCTTCGGCCGCCA CCTCTGTGTACTATCTATCTACTATACTGTGTTCTTATTCATGGCGGCAG ATATCATTTGCGGGGTCTTATTCTTGGGCAGGTCGGATTTGAGTCCGTAC ATGTACATTGTGTAGACTACTCTGTGCTTGCATGTACTTTGTAGTCCACC GCTACATTGTATGTTGGCGGCCACTCGATGCGCGGAGCTTTCGCTGTCAA TCGGTTAAAGCAGGAGGAACGAGTGCGACGATGACTTTCTTGTCCGTGTC ACGCATCTTCGCCTCCACAACAAGGGCATCTCCACCCTCGACAACGCCAA CGTCTTCGACGCTTGCCCTTCTCTCAAGGTATGTCTATGCGATGCACAAC TAGATGTATGTACTCGCGCGAGATGAGTAAGAGTCGTATAGTTTACGTGA ACACACGTTTCGGCCCTCCCTCTGTCTAAAAAACAACATTTGAAAGGCCC ATCTAGTACACCGTATCTACACCGTACCCTTGAGTGCAAAAAGAGCGCAC CAGGCATTCAATCGCTACAACATATACTCCTATGGTACATTTGAGTGGGT GCTTGAGCTCAAATTGTCGAGCGATACTTGTTTCGAAGCCCTCAGAAACC TTTAGACTATACCAGTACTCCGTATATATTCGTACCATGTTTGTCTGTCT GTGCCGTGAACTGCGTAATAAAGATGTTTTGTGTTTTTTTGTCTCTTGGG CCATTCGCGTCCAACTCGGCAGCCAGATTGCGATCCTTCTGTACAGCCTT ACTGAGCCGACATGAATGCATTTTTCTAGGTCCTGTACCTGTACGACAAC TGCGTGGAGTCCCTCAAGGGCTTGGAAAAACTGCAACAGATGGAGCAGCT CTACGTCGACAACAACTTGCTGGCGACTGTTCAGGGCACTTTGCCTTACA GGCGGCTAACCAAACTGTGAGAATAATTATCATTCCCCAGAGTCGGGACT CGTCGACCACGCCCGGTGCGGCGGCTCTACATCCGCCTGCGTTTGGCTGC CACGTTAAGGGTAGAGTGTACGACATGTGCTGCTGTCTATGTTTAGCGTT AGTTTCTAGATAGATAGTTATATTTTAGCGTTTGGCACTGCACCCGCCAA CAACTCAGCGTTGTTCGGCAAAGCCGCGCTTCAGTGTTCGCGTAGATTAG GTGCAGCTTGAGTTACATACGCTTTTCTTTTTTCGGCGAACATTTGTCGG AGATGATACGATTGGAGCAAAAGGACGGGAGTACTGCCCAACGCGCGAAC GAAAAATCGAATTGCAGTTAGTTTTACGTTCAACGGAAATATATACCCCC CTCTGATCAGGCACTTGAGCGGGAACAATATCTCGACGTTGTCTGGACTG GAGTCGGCTAATTGTCTGGAAGAGCTGCATGTAGCCAAACAGCGACTCCC ACGAGGACAACGCTTCGCCATCGACCAAGCATCCGTCAACGGTGTCAAGG TGATTTCTGTTTCAGCCGCTTTTGCACATTTACTCTGGAAAACATACCGA CCCGGAAGTGTCGAGCACAGAGTGTGGACAGAAAGTTGGGCACGGAAACC GATTCCATGCATTTGTATCGGACCGGAGTAACCGACGACTCACTGGCAAT ATATGAATATATGCACTCGGTATATCTGCCGGTATCGCGCATTTACCATT ATCCTTTCTTTTCGTGGGATACATACATATCTATGCTGGTGCCCGTTTTT ATGTAGTTCATGTCTTCCCGCGTCGCAGGCATCATACCGGCGGGCAGTTT TCCATTTTTTATTCCTTTCCAGATCCCCACTTGTTGGCTCGATTTTCTCC CCGTGGTAGGACTCGTTGGTGGTGCTAGATGCCTCGGGAAATGGCATGGG TGGGACGGAAATTGAGCCTCTACTCGACCTGTACCGGCTCGAGACCCTCA ATTTGGCGGACAACGACCTTGGGGAAATGGCGCAGGTCTGTCGAATACGT GCAAAGAGATGTTTAACTTTTCTTGCCTAAATAGCAAAGGTGCCAATCAT TCATGAAACGAACATACTTTTATGTATGCTGGAGATCAAGTTCTAACTTC ACCAGCTCCTTTCTCTCCGACTCCAAGCCGATCGATGACCATGTAACACT TTTTCTGAACGGCTAACGGCACGGCTGGAGAAATTATAATCCATACTTCT AACGTGGTAACGCTTTACACCACAACAGTTTGTGGGAAGACACGACGTAC CAATTGAGATGGCATTGATAAACACGTTTGAGTATCTGAGAAACAACCCA CCAGCCCACCAACACGTCTACCCCATGTACATGTAAATGTGGCTCCAAAC TGAAGCCGCATGCCGTGACGACCTCCTCCCAAATGCGGCAATCCAACAGG TGGTTGACCTGGTGAGCAGCTTGGAGATGCTGAGGACCATTGACCTGAGA GGCAACGCCGTCAGTCGGATGGCCAAATACTTTGAGAGGGCCGTCACTAG GTGGGATTTCTGAACGTCTTTGCCGCGCTTCAGCGATGCAAGTGCGATAC ACTCCAAGCGCCATACATGAGACGTATGCAATCGCCGCTAGAGTGAAAGA CAATTGTTCTTCTGTGGGCTCAAGGACGGACAATTAGCTATTAACTCTAT ATGCTAAGTTTTGAGCTTCCTGTTTCTCCTCGTCATTTGTTTTCGAAAAG ACGACCTTCGTTCGACAAGATAACCGCAGCGACTCAATGCACACACCTCT CCGCCAACGGGCACCAATGCCGTGTGCCACTGGGCACGAAGGTGTGGGGA TGGCCTGGCGACTCTTGACGGCAAGCCGGTTCATACGCAACACCGGATGA TGCTGCAGCGCCTCGATCGCCACAAGCGGGCAGAGGCGAGGAAGTCTACC TCTAAATCCCTGTCCAGTTCCACCGCCCACGCACCCATGGCAGAGTCTGG GTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1499:14036..18139-

>mRNA_L-elsbetiae_contig1499.3576.1 ID=mRNA_L-elsbetiae_contig1499.3576.1|Name=mRNA_L-elsbetiae_contig1499.3576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1794bp|location=Sequence derived from alignment at L-elsbetiae_contig1499:14036..18139- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCTCCAGCAGTATGGAATATCGCGACGAAAGCTCGTCACGGGCCTC
CTCAGCTGGTCGGAGACGTGCTACCCGCGAAATGTTCTTGTGTAGTACAG
CCACGGTCAGGAGATGGGCTCCAGCAGTATGGAATATCGCGACGAAAGCT
CGTCACGGGCCTCCTCAGCTGGTCGGAGACGTGCTACCCGCGAAATGTTC
TTGTGTAGTACAGCCACGGTCAGGAGCAGGAGGAACGAGTGCGACGATGA
CTTTCTTGTCCGTGTCACGCATCTTCGCCTCCACAACAAGGGCATCTCCA
CCCTCGACAACGCCAACGTCTTCGACGCTTGCCCTTCTCTCAAGCAGGAG
GAACGAGTGCGACGATGACTTTCTTGTCCGTGTCACGCATCTTCGCCTCC
ACAACAAGGGCATCTCCACCCTCGACAACGCCAACGTCTTCGACGCTTGC
CCTTCTCTCAAGGTCCTGTACCTGTACGACAACTGCGTGGAGTCCCTCAA
GGGCTTGGAAAAACTGCAACAGATGGAGCAGCTCTACGTCGACAACAACT
TGCTGGCGACTGTTCAGGGCACTTTGCCTTACAGGCGGCTAACCAAACTG
TCCTGTACCTGTACGACAACTGCGTGGAGTCCCTCAAGGGCTTGGAAAAA
CTGCAACAGATGGAGCAGCTCTACGTCGACAACAACTTGCTGGCGACTGT
TCAGGGCACTTTGCCTTACAGGCGGCTAACCAAACTGCACTTGAGCGGGA
ACAATATCTCGACGTTGTCTGGACTGGAGTCGGCTAATTGTCTGGAAGAG
CTGCATGTAGCCAAACAGCGACTCCCACGAGGACAACGCTTCGCCATCGA
CCAAGCATCCGTCAACGGTGTCAAGGCACTTGAGCGGGAACAATATCTCG
ACGTTGTCTGGACTGGAGTCGGCTAATTGTCTGGAAGAGCTGCATGTAGC
CAAACAGCGACTCCCACGAGGACAACGCTTCGCCATCGACCAAGCATCCG
TCAACGGTGTCAAGGACTCGTTGGTGGTGCTAGATGCCTCGGGAAATGGC
ATGGGTGGGACGGAAATTGAGCCTCTACTCGACCTGTACCGGCTCGAGAC
CCTCAATTTGGCGGACAACGACCTTGGGGAAATGGCGCAGGACTCGTTGG
TGGTGCTAGATGCCTCGGGAAATGGCATGGGTGGGACGGAAATTGAGCCT
CTACTCGACCTGTACCGGCTCGAGACCCTCAATTTGGCGGACAACGACCT
TGGGGAAATGGCGCAGGTGGTTGACCTGGTGAGCAGCTTGGAGATGCTGA
GGACCATTGACCTGAGAGGCAACGCCGTCAGTCGGATGGCCAAATACTTT
GAGAGGGCCGTCACTAGGTGGTTGACCTGGTGAGCAGCTTGGAGATGCTG
AGGACCATTGACCTGAGAGGCAACGCCGTCAGTCGGATGGCCAAATACTT
TGAGAGGGCCGTCACTAGGTGTGGGGATGGCCTGGCGACTCTTGACGGCA
AGCCGGTTCATACGCAACACCGGATGATGCTGCAGCGCCTCGATCGCCAC
AAGCGGGCAGAGGCGAGGAAGTCTACCTCTAAATCCCTGTCCAGTTCCAC
CGCCCACGCACCCATGGCAGAGTCTGGGTGAGTGTGGGGATGGCCTGGCG
ACTCTTGACGGCAAGCCGGTTCATACGCAACACCGGATGATGCTGCAGCG
CCTCGATCGCCACAAGCGGGCAGAGGCGAGGAAGTCTACCTCTAAATCCC
TGTCCAGTTCCACCGCCCACGCACCCATGGCAGAGTCTGGGTGA
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