prot_L-elsbetiae_contig10297.340.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10297.340.1
Unique Nameprot_L-elsbetiae_contig10297.340.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
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BLAST of mRNA_L-elsbetiae_contig10297.340.1 vs. uniprot
Match: A0A4S8KW60_DENBC (3'-5' exonuclease domain-containing protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KW60_DENBC)

HSP 1 Score: 69.3 bits (168), Expect = 1.460e-10
Identity = 41/146 (28.08%), Postives = 71/146 (48.63%), Query Frame = 0 
Query:   30 HPGVLKRLPRDLLELFPAVILRKSAVDKKLITRVEQTLVNPIGLKTLANNVRENHMRHYLWLQLRYYARMGRRRRHGQSSAVPAENELMTKPPRFSRFDDQAGYNGRPPSASVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDS 175
            HP +LK+LP DL + FPA +  +S +DK L+  +   + + +      + +RE H+R +  L+LRY   +  ++++ +       N   TK   FS FDD+  Y G  PS   + + ++  ME +     +    + G  L  D S
Sbjct:   26 HPDILKQLPPDLADEFPAFLTHRSGIDKGLLALIRAGVAHRVSSNAWEDILRELHLREHDILELRYLHSIQDQQKYNEKW-----NIAQTKYIPFSAFDDRTQYAGHAPSKRYINNVYMDFMESIRSCLDQCMSALTGHILQWDHS 166
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10297.340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4S8KW60_DENBC1.460e-1028.083'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10297contigL-elsbetiae_contig10297:1192..1917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10297.340.1mRNA_L-elsbetiae_contig10297.340.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10297 1192..1918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10297.340.1 ID=prot_L-elsbetiae_contig10297.340.1|Name=mRNA_L-elsbetiae_contig10297.340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
NSSSKGKGRAGSRGAGSNTGYTGYKFAPWHPGVLKRLPRDLLELFPAVIL
RKSAVDKKLITRVEQTLVNPIGLKTLANNVRENHMRHYLWLQLRYYARMG
RRRRHGQSSAVPAENELMTKPPRFSRFDDQAGYNGRPPSASVLQSAFVAV
MEGMEHWYHRQQQLVDGRNLGLDDS
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