prot_L-elsbetiae_contig10295.339.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10295.339.1
Unique Nameprot_L-elsbetiae_contig10295.339.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length230
Homology
BLAST of mRNA_L-elsbetiae_contig10295.339.1 vs. uniprot
Match: A0A7S3Y3K0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3K0_HETAK)

HSP 1 Score: 52.4 bits (124), Expect = 2.650e-5
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    1 MTNAKSRRCGQQGCTKHPLFGVGGSGRPEFCSAHKMDGM 39
            M + +SR+CG  GC+KHP F   G GR  FCS HK++GM
Sbjct:    1 MVDVRSRKCGHDGCSKHPGFNFEGKGRGLFCSQHKLEGM 39          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10295.339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3Y3K0_HETAK2.650e-553.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10295contigL-elsbetiae_contig10295:138..2227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10295.339.1mRNA_L-elsbetiae_contig10295.339.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10295 58..2784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10295.339.1 ID=prot_L-elsbetiae_contig10295.339.1|Name=mRNA_L-elsbetiae_contig10295.339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MTNAKSRRCGQQGCTKHPLFGVGGSGRPEFCSAHKMDGMVDVKSKRCGQQ
GCTKQPSFGVGGSGRPEFCSEHKKDGMMNAKSRRCGQQGCTKHPSFGVGG
SGRPEFCSAHKKDGMINVKNMRCGQQGCTKHPSFGVDGGGRPEFCSEHKM
DGMVDVKSKRRGQQVPPRNMGSIKRARRAPADSVVAPIPVEAPRNEITIP
SEPDEPFREPDGVKTEPGAFRIGRRGSWR*
back to top