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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1327 |
| Cds size | 690 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815258.6219318-UTR-L-elsbetiae_contig10295:57..137 | 1622815258.6219318-UTR-L-elsbetiae_contig10295:57..137 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10295 58..137 + |
| 1691682801.1642065-UTR-L-elsbetiae_contig10295:57..137 | 1691682801.1642065-UTR-L-elsbetiae_contig10295:57..137 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10295 58..137 + |
| 1622815258.6564429-UTR-L-elsbetiae_contig10295:2227..2784 | 1622815258.6564429-UTR-L-elsbetiae_contig10295:2227..2784 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10295 2228..2784 + |
| 1691682801.2224083-UTR-L-elsbetiae_contig10295:2227..2784 | 1691682801.2224083-UTR-L-elsbetiae_contig10295:2227..2784 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10295 2228..2784 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815258.6374161-CDS-L-elsbetiae_contig10295:137..823 | 1622815258.6374161-CDS-L-elsbetiae_contig10295:137..823 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10295 138..823 + |
| 1691682801.1960747-CDS-L-elsbetiae_contig10295:137..823 | 1691682801.1960747-CDS-L-elsbetiae_contig10295:137..823 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10295 138..823 + |
| 1622815258.6478395-CDS-L-elsbetiae_contig10295:2223..2227 | 1622815258.6478395-CDS-L-elsbetiae_contig10295:2223..2227 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10295 2224..2227 + |
| 1691682801.2106144-CDS-L-elsbetiae_contig10295:2223..2227 | 1691682801.2106144-CDS-L-elsbetiae_contig10295:2223..2227 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10295 2224..2227 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10295.339.1 >prot_L-elsbetiae_contig10295.339.1 ID=prot_L-elsbetiae_contig10295.339.1|Name=mRNA_L-elsbetiae_contig10295.339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MTNAKSRRCGQQGCTKHPLFGVGGSGRPEFCSAHKMDGMVDVKSKRCGQQ
GCTKQPSFGVGGSGRPEFCSEHKKDGMMNAKSRRCGQQGCTKHPSFGVGG
SGRPEFCSAHKKDGMINVKNMRCGQQGCTKHPSFGVDGGGRPEFCSEHKM
DGMVDVKSKRRGQQVPPRNMGSIKRARRAPADSVVAPIPVEAPRNEITIP
SEPDEPFREPDGVKTEPGAFRIGRRGSWR* back to topmRNA from alignment at L-elsbetiae_contig10295:58..2784+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig10295.339.1 ID=mRNA_L-elsbetiae_contig10295.339.1|Name=mRNA_L-elsbetiae_contig10295.339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2727bp|location=Sequence derived from alignment at L-elsbetiae_contig10295:58..2784+ (Laminarionema elsbetiae ELsaHSoW15)
AAGGTTGCACCAAGCAACCGTCATTTGGCGTGGGCGGTAGCGGCAGGCCG
GAGTTCTGCTCTGAGCACAAGAAGGACGGGATGACGAACGCGAAGAGCAG
GAGGTGCGGCCAACAAGGTTGCACCAAGCACCCGTTATTTGGCGTGGGGG
GTAGCGGCAGGCCGGAGTTCTGCTCTGCACACAAGATGGACGGGATGGTG
GACGTGAAGAGCAAGAGGTGCGGCCAACAAGGTTGCACCAAGCAACCGTC
ATTTGGCGTGGGCGGTAGCGGCAGGCCGGAGTTCTGCTCTGAGCACAAGA
AGGACGGGATGATGAACGCGAAGAGCAGGAGGTGCGGCCAACAAGGTTGC
ACCAAGCACCCGTCATTTGGCGTGGGCGGTAGCGGCAGGCCGGAGTTCTG
CTCTGCACACAAGAAAGACGGGATGATAAACGTGAAGAACATGAGGTGCG
GCCAACAAGGTTGCACCAAGCACCCGTCATTTGGCGTAGATGGTGGCGGC
AGGCCGGAGTTCTGCTCTGAGCACAAGATGGACGGGATGGTGGACGTGAA
GAGCAAGAGGCGCGGCCAACAAGTGCCTCCAAGGAATATGGGGAGCATTA
AGCGGGCCCGCCGGGCTCCCGCCGACTCGGTTGTGGCTCCAATTCCAGTA
GAAGCACCGCGTAATGAGATCACCATCCCATCAGAGCCGGACGAACCATT
TCGGGAGCCAGACGGCGTGAAGACGGAACCGGGGGCATTTCGCATTGGGA
GGCGAGGAAGCTGGAGGTGAGTTAAACGTAATCACCGCCGTTTTGCTACC
GACTATTCATACTGCGTCGTGAGGTACTCTGCCTCCACCTGTTGTCTGTG
CAGTTGTCGTACGAGTTTGTAGCGAAACGTTCCTCTTGTTTCTATGTAGG
AGTGTTTTGCTTGCCAGTGTTATTTGAACTAAATTTCAAGGGGGCGCATG
TGCGGGATATTTTTAAGGAGGCGCCTTCCGTCACGGCCAAAGGGCACAGG
GCATCAGTATACCCCACGCACAAAGAAGCCGATATCTCAGCTTGCACGAA
GTGATCCAAAACGCGACTGTGAGGCTGTGTACTTGTAGTAGAGATGTGTG
ACTACAGAGCGGGCCAAAAATCTAGGTGGTGGCTCTAACTGCAATTAGAC
GTGCCATGGCAAAAAAATGATTGGGAAGAGAGAGGGAGAGTCGAAAAAAG
AGAGCCAGCTGCGAGACAGACGAGCACGATTCCTATACAAAACGCAACTT
TTTGATTCCTGAAGAGAATCACAGAGATCAACCGCAGACCGCGCACGTTG
GCAAGAGTAGGGCCTACGGTGTGCAGAGCACCTGCTGAAATTAGATAACT
CGTTGCGCTGCAACTAGACGAGCTGCTGCAGTCTGCTACTGCTGGCCTGG
CCGAGGGCACCAACGTGTGCGGGAAGGCAGCTCTAGTTCGACATTCACAG
AGCGATTCTGAGTTTAAAATCTGCACCGGGACTAGCTATGAGCAGCATAT
CGCACCCCCTCTAGTTTGTTTGGTCTGGGAGGGGTTATGTGAACTCCTAG
GGCTGGCGCAGGTGTCGCGAGGCCATAAGAGGGCCGGAGCTTTTGGTGGG
AGGTTCTTTAATGCGCGTGCTTTTTTCTCCGAGTCCCCGACGAACTTGTG
ATCGGTGTAAACCATCCTCACGCCGCGGCTAGAGCATCGATTTGCTTCGT
TCTTTTTCCTACACCCTCGAGAAGTACAGGAGCTACAGACCTGTTCTTTC
TTCACCACCAACACGGCATTGTGCGGCAAGAACTCGAAGCAAAGGAGCGA
AACAAGTGCCCCCTTAAAAATTTAATCCAAATAACATTGTTGCGTAGCAC
CGCTCGACAGGTAAAGCTACACCTGGTGGGGAAAACTACTGTTGCCCCGC
GCCGAGTTGCATCCATCCTCCCCACGATCGAAGCGTGGACTGATGCGTGT
TGTTTGGTCGTGCTAGTATACGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGATTTTGTACCGTCTCGTTGAAGTTATATGCCTCCCCCCC
CCCCCCCACACTGCTGCTCCTAAATACTACCAGTTTTTCCGACAGCCACC
GATGCCACTTGGAACCTTTTAAAATTCTTTTTTTTTTCGCGATAAATATA
CCTTCTTTTCCACCAGGTGAGGTGCGTCGCGGGCGAAGAATCGGAGGAGC
TGCAACGGGGGGACGAAAGCACAAAGCACAAGTTTGATAGCATTGTGCTT
GCAGGGAGACAGCAGCAGACGGGATTTACGTGGCACGCGCACCGCGCACA
ACCACGTGTGTGTAGCGAACGCTCTTGGCTGCGGTTTGAACAGCAGCGTT
TAACATATAGGCTAGGTTGTCGGTGACAACCCGGACAACCAAACGCTCCA
TTTTTAGGCCCCAAACAAATTGCGCGGTGCATATTGTTCTCGCTGATTTG
GACACCAGTTTAGGTTGTGTCCGGAGGCTGCGGTGGTGCGGGCGCGATAT
ACCGCCGCACCCAGCGCACTACAGTAAACAACTGCTCGTTGGCAGCTTCA
GTAGCCTCTTTCTCAAAGCGGCATCGCGCGCGCGGTACGGGATAGGAACG
CTTAGCATTCCGCAGGCGGAATTTCGTTTTGATAGGGACGCTTAGCATCC
CGCAGGCGGAATTTCGTTTTTTGATTGTTTCGATAGTCGGGATGGTAAAA
GGTCCCTGTTTGTATACCTCGGTACGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig10295:58..2784+ >mRNA_L-elsbetiae_contig10295.339.1 ID=mRNA_L-elsbetiae_contig10295.339.1|Name=mRNA_L-elsbetiae_contig10295.339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1380bp|location=Sequence derived from alignment at L-elsbetiae_contig10295:58..2784+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGAACGCGAAGAGCAGGAGGTGCGGCCAACAAGGTTGCACCAAGCA
CCCGTTATTTGGCGTGGGGGGTAGCGGCAGGCCGGAGTTCTGCTCTGCAC
ACAAGATGGACGGGATGGTGGACGTGAAGAGCAAGAGGTGCGGCCAACAA
GGTTGCACCAAGCAACCGTCATTTGGCGTGGGCGGTAGCGGCAGGCCGGA
GTTCTGCTCTGAGCACAAGAAGGACGGGATGATGAACGCGAAGAGCAGGA
GGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCATTTGGCGTGGGCGGT
AGCGGCAGGCCGGAGTTCTGCTCTGCACACAAGAAAGACGGGATGATAAA
CGTGAAGAACATGAGGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCAT
TTGGCGTAGATGGTGGCGGCAGGCCGGAGTTCTGCTCTGAGCACAAGATG
GACGGGATGGTGGACGTGAAGAGCAAGAGGCGCGGCCAACAAGTGCCTCC
AAGGAATATGGGGAGCATTAAGCGGGCCCGCCGGGCTCCCGCCGACTCGG
TTGTGGCTCCAATTCCAGTAGAAGCACCGCGTAATGAGATCACCATCCCA
TCAGAGCCGGACGAACCATTTCGGGAGCCAGACGGCGTGAAGACGGAACC
GGGGGCATTTCGCATTGGGAGGCGAGGAAGCTGGAGATGACGAACGCGAA
GAGCAGGAGGTGCGGCCAACAAGGTTGCACCAAGCACCCGTTATTTGGCG
TGGGGGGTAGCGGCAGGCCGGAGTTCTGCTCTGCACACAAGATGGACGGG
ATGGTGGACGTGAAGAGCAAGAGGTGCGGCCAACAAGGTTGCACCAAGCA
ACCGTCATTTGGCGTGGGCGGTAGCGGCAGGCCGGAGTTCTGCTCTGAGC
ACAAGAAGGACGGGATGATGAACGCGAAGAGCAGGAGGTGCGGCCAACAA
GGTTGCACCAAGCACCCGTCATTTGGCGTGGGCGGTAGCGGCAGGCCGGA
GTTCTGCTCTGCACACAAGAAAGACGGGATGATAAACGTGAAGAACATGA
GGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCATTTGGCGTAGATGGT
GGCGGCAGGCCGGAGTTCTGCTCTGAGCACAAGATGGACGGGATGGTGGA
CGTGAAGAGCAAGAGGCGCGGCCAACAAGTGCCTCCAAGGAATATGGGGA
GCATTAAGCGGGCCCGCCGGGCTCCCGCCGACTCGGTTGTGGCTCCAATT
CCAGTAGAAGCACCGCGTAATGAGATCACCATCCCATCAGAGCCGGACGA
ACCATTTCGGGAGCCAGACGGCGTGAAGACGGAACCGGGGGCATTTCGCA
TTGGGAGGCGAGGAAGCTGGAGGTGAGTGA back to top
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