prot_L-elsbetiae_contig1029.331.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1029.331.1
Unique Nameprot_L-elsbetiae_contig1029.331.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length238
Homology
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BLAST of mRNA_L-elsbetiae_contig1029.331.1 vs. uniprot
Match: D8LLL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL4_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 6.340e-85
Identity = 161/250 (64.40%), Postives = 175/250 (70.00%), Query Frame = 0 
Query:    1 MAEVFSSNSPCMLGKRVLSPHSHSSTLLGGQLDFSSKKRRLGQGTE-GSFDRVESDHQRQRS---PSPMRSGKRARPLSPLQPSAHFLGGDARGSSASA---------GSFSWSQQXXXRAQRAAAEDSELASLRLEVGALRAHAVEKDTGLNMAREENARLKEGMGMYQKELERLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGEYMKRLEQTNYALSVRVQAMGNSGPSDFMGGQRPPDVF 237
            MAEVFSSNSPCMLGKRVLSPHSH  TL+GGQLDFSSKKRRLGQG + GSFDR ESD         PSP+R+GKRARPLSPLQPSAHF  G A G +ASA         GSFS   Q   RAQR  AED ELA+LR EV  L+AHA EK++GLNMAREEN RLKEG+GM+QKELERL++                               QA EY+KRLEQTNYALSVRVQAMGNSG SDFMGGQRPPDVF
Sbjct:    1 MAEVFSSNSPCMLGKRVLSPHSHG-TLMGGQLDFSSKKRRLGQGLDQGSFDRSESDQXXXXXXXXPSPVRAGKRARPLSPLQPSAHFSSGGA-GEAASASRGSGLFGGGSFSQQHQHQQRAQRTGAEDGELAALRREVAVLQAHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGASDFMGGQRPPDVF 248
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1029.331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLL4_ECTSI6.340e-8564.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..173
NoneNo IPR availablePANTHERPTHR31245:SF1UBIQUITIN SYSTEM COMPONENT CUE PROTEINcoord: 130..237
NoneNo IPR availablePANTHERPTHR31245FAMILY NOT NAMEDcoord: 130..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1029contigL-elsbetiae_contig1029:6122..8985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1029.331.1mRNA_L-elsbetiae_contig1029.331.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1029 6122..9179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1029.331.1 ID=prot_L-elsbetiae_contig1029.331.1|Name=mRNA_L-elsbetiae_contig1029.331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MAEVFSSNSPCMLGKRVLSPHSHSSTLLGGQLDFSSKKRRLGQGTEGSFD
RVESDHQRQRSPSPMRSGKRARPLSPLQPSAHFLGGDARGSSASAGSFSW
SQQQQQRAQRAAAEDSELASLRLEVGALRAHAVEKDTGLNMAREENARLK
EGMGMYQKELERLASENRILKRAVGIQNTKGKELENQLHGLQQAAGQAGE
YMKRLEQTNYALSVRVQAMGNSGPSDFMGGQRPPDVF*
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