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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 753 |
Cds size | 483 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815579.0293732-UTR-L-elsbetiae_contig14442:2983..3168 | 1622815579.0293732-UTR-L-elsbetiae_contig14442:2983..3168 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14442 2984..3168 - |
1691682970.9142187-UTR-L-elsbetiae_contig14442:2983..3168 | 1691682970.9142187-UTR-L-elsbetiae_contig14442:2983..3168 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14442 2984..3168 - |
1622815579.043475-UTR-L-elsbetiae_contig14442:3191..3276 | 1622815579.043475-UTR-L-elsbetiae_contig14442:3191..3276 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14442 3192..3276 - |
1691682970.9285805-UTR-L-elsbetiae_contig14442:3191..3276 | 1691682970.9285805-UTR-L-elsbetiae_contig14442:3191..3276 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14442 3192..3276 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815579.0603628-CDS-L-elsbetiae_contig14442:3276..3759 | 1622815579.0603628-CDS-L-elsbetiae_contig14442:3276..3759 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14442 3277..3759 - |
1691682970.937512-CDS-L-elsbetiae_contig14442:3276..3759 | 1691682970.937512-CDS-L-elsbetiae_contig14442:3276..3759 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14442 3277..3759 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14442.3278.1 >prot_L-elsbetiae_contig14442.3278.1 ID=prot_L-elsbetiae_contig14442.3278.1|Name=mRNA_L-elsbetiae_contig14442.3278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
YLSPHSEGLDKLYYEQPLTAHHRATSHDTTQRHYQSTAPLPALHPGGGPL STHRVRNLTCSSLGLVSLWTGTYIGHGAGLPAFSICIESNWRLRNNNATS GHRRPVRWVCHRNQSAMSHEFGRVSRQAIVTIRNMLHMKFKTNAGAPWIL QLLGSRNHPK* back to topmRNA from alignment at L-elsbetiae_contig14442:2984..3759- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14442.3278.1 ID=mRNA_L-elsbetiae_contig14442.3278.1|Name=mRNA_L-elsbetiae_contig14442.3278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=776bp|location=Sequence derived from alignment at L-elsbetiae_contig14442:2984..3759- (Laminarionema elsbetiae ELsaHSoW15) TATCTCTCTCCGCACTCGGAAGGCCTGGACAAACTGTACTACGAACAACC
GCTAACGGCGCATCATCGGGCAACGTCACATGACACGACACAACGCCATT
ACCAGAGCACTGCTCCGCTGCCTGCTCTGCACCCCGGTGGTGGGCCGTTA
TCTACACACCGTGTACGTAATCTTACTTGCTCGTCTCTGGGCTTGGTCTC
CTTGTGGACCGGTACATACATAGGGCATGGTGCCGGCCTACCCGCTTTTT
CAATATGCATAGAATCCAACTGGCGGCTCCGAAATAATAACGCCACATCT
GGTCACAGGAGGCCTGTGCGCTGGGTGTGCCACCGCAACCAATCGGCAAT
GTCTCATGAGTTCGGACGTGTCTCTCGGCAGGCTATCGTGACCATCCGCA
ACATGCTCCACATGAAATTCAAAACCAACGCGGGAGCACCATGGATCTTG
CAACTTCTTGGAAGTCGCAATCATCCCAAATAGTATACTAAACACGAACA
ACGCGTATGGAAGCCACTCAAGGACCGACTCCCAGGGCCAACTTATTATG
ACTTTTCCCGCGTGTTGGGTCCCCTAGCACCCCCCATCCAGAACTGGACA
CCGATGTCTGGTATTGGTGCTGGTGCTGATGGTGGCATTTATTGGTTGCT
CTCCGGAGGCCACTGCTGCGCTTGAAGGAACTTGCACTCGACGCTCGCGC
AGGGCGCCGCTGCGTGCTCCGAGCGCGCGCGCTCGCTAAGGAGACCGCCC
CGGCGGATTGTGCGATCCCCTTGCTC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14442:2984..3759- >mRNA_L-elsbetiae_contig14442.3278.1 ID=mRNA_L-elsbetiae_contig14442.3278.1|Name=mRNA_L-elsbetiae_contig14442.3278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=966bp|location=Sequence derived from alignment at L-elsbetiae_contig14442:2984..3759- (Laminarionema elsbetiae ELsaHSoW15) TATCTCTCTCCGCACTCGGAAGGCCTGGACAAACTGTACTACGAACAACC GCTAACGGCGCATCATCGGGCAACGTCACATGACACGACACAACGCCATT ACCAGAGCACTGCTCCGCTGCCTGCTCTGCACCCCGGTGGTGGGCCGTTA TCTACACACCGTGTACGTAATCTTACTTGCTCGTCTCTGGGCTTGGTCTC CTTGTGGACCGGTACATACATAGGGCATGGTGCCGGCCTACCCGCTTTTT CAATATGCATAGAATCCAACTGGCGGCTCCGAAATAATAACGCCACATCT GGTCACAGGAGGCCTGTGCGCTGGGTGTGCCACCGCAACCAATCGGCAAT GTCTCATGAGTTCGGACGTGTCTCTCGGCAGGCTATCGTGACCATCCGCA ACATGCTCCACATGAAATTCAAAACCAACGCGGGAGCACCATGGATCTTG CAACTTCTTGGAAGTCGCAATCATCCCAAATAGTATCTCTCTCCGCACTC GGAAGGCCTGGACAAACTGTACTACGAACAACCGCTAACGGCGCATCATC GGGCAACGTCACATGACACGACACAACGCCATTACCAGAGCACTGCTCCG CTGCCTGCTCTGCACCCCGGTGGTGGGCCGTTATCTACACACCGTGTACG TAATCTTACTTGCTCGTCTCTGGGCTTGGTCTCCTTGTGGACCGGTACAT ACATAGGGCATGGTGCCGGCCTACCCGCTTTTTCAATATGCATAGAATCC AACTGGCGGCTCCGAAATAATAACGCCACATCTGGTCACAGGAGGCCTGT GCGCTGGGTGTGCCACCGCAACCAATCGGCAATGTCTCATGAGTTCGGAC GTGTCTCTCGGCAGGCTATCGTGACCATCCGCAACATGCTCCACATGAAA TTCAAAACCAACGCGGGAGCACCATGGATCTTGCAACTTCTTGGAAGTCG CAATCATCCCAAATAG back to top
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