prot_L-elsbetiae_contig14276.3172.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14276.3172.1
Unique Nameprot_L-elsbetiae_contig14276.3172.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length48
Homology
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Match: UPI0004596B05 (nitronate monooxygenase n=1 Tax=Bordetella bronchiseptica TaxID=518 RepID=UPI0004596B05)

HSP 1 Score: 49.7 bits (117), Expect = 9.480e-6
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0
Query:    1 NDTATTEIYTLSLHDALPICVFSAG 25
            NDTATTEIYTLSLHDALPIC+ +AG
Sbjct:    5 NDTATTEIYTLSLHDALPICIAAAG 29          
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Match: UPI001F402FF6 (integrase core domain-containing protein n=1 Tax=Bordetella holmesii TaxID=35814 RepID=UPI001F402FF6)

HSP 1 Score: 47.0 bits (110), Expect = 1.480e-5
Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0
Query:    1 NDTATTEIYTLSLHDALPICVFSAGFVGFGGMYVHILSPSPHQ 43
            NDTATTEIYTLSLHDALPIC   +    +   Y H    S H+
Sbjct:    1 NDTATTEIYTLSLHDALPICFIQSALREWA--YAHTYQNSQHR 41          
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Match: A0A357VKS7_9FIRM (Uncharacterized protein (Fragment) n=1 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A357VKS7_9FIRM)

HSP 1 Score: 46.6 bits (109), Expect = 3.180e-5
Identity = 27/46 (58.70%), Postives = 29/46 (63.04%), Query Frame = 0
Query:    1 NDTATTEIYTLSLHDALPICV-----FSAGFVGFGGMYVHILSPSP 41
            NDTATTEIYTLSLHDALPI +      S+G  GFG    H  S  P
Sbjct:    6 NDTATTEIYTLSLHDALPIYIQPGLALSSGEGGFGPFPKHSGSQQP 51          
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Match: X1Q312_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1Q312_9ZZZZ)

HSP 1 Score: 45.1 bits (105), Expect = 3.380e-5
Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = 0
Query:    1 NDTATTEIYTLSLHDALPIC 20
            NDTATTEIYTLSLHDALPIC
Sbjct:    4 NDTATTEIYTLSLHDALPIC 23          
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Match: UPI001CC4E4FB (hypothetical protein n=1 Tax=Burkholderia diffusa TaxID=488732 RepID=UPI001CC4E4FB)

HSP 1 Score: 45.1 bits (105), Expect = 5.840e-5
Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = 0
Query:    1 NDTATTEIYTLSLHDALPIC 20
            NDTATTEIYTLSLHDALPIC
Sbjct:    6 NDTATTEIYTLSLHDALPIC 25          
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Match: UPI0006645EA1 (hypothetical protein n=1 Tax=Pedobacter sp. V48 TaxID=509635 RepID=UPI0006645EA1)

HSP 1 Score: 45.1 bits (105), Expect = 6.820e-5
Identity = 23/39 (58.97%), Postives = 25/39 (64.10%), Query Frame = 0
Query:    1 NDTATTEIYTLSLHDALPICVFSAGFVGFGGMYVHILSP 39
            NDTATTEIYTLSLHDALPI +        GG+  H   P
Sbjct:   12 NDTATTEIYTLSLHDALPISMI------IGGLVYHTFGP 44          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14276.3172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI0004596B059.480e-688.00nitronate monooxygenase n=1 Tax=Bordetella bronchi... [more]
UPI001F402FF61.480e-555.81integrase core domain-containing protein n=1 Tax=B... [more]
A0A357VKS7_9FIRM3.180e-558.70Uncharacterized protein (Fragment) n=1 Tax=Peptoco... [more]
X1Q312_9ZZZZ3.380e-5100.00Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
UPI001CC4E4FB5.840e-5100.00hypothetical protein n=1 Tax=Burkholderia diffusa ... [more]
UPI0006645EA16.820e-558.97hypothetical protein n=1 Tax=Pedobacter sp. V48 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..36
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14276contigL-elsbetiae_contig14276:3..634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14276.3172.1mRNA_L-elsbetiae_contig14276.3172.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14276 3..634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14276.3172.1 ID=prot_L-elsbetiae_contig14276.3172.1|Name=mRNA_L-elsbetiae_contig14276.3172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=48bp
NDTATTEIYTLSLHDALPICVFSAGFVGFGGMYVHILSPSPHQDYEHI
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