mRNA_L-elsbetiae_contig1423.3142.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1423.3142.1
Unique NamemRNA_L-elsbetiae_contig1423.3142.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1423.3142.1 vs. uniprot
Match: A0A6H5K005_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K005_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.360e-95
Identity = 212/458 (46.29%), Postives = 264/458 (57.64%), Query Frame = 1 
Query:    7 LGSWQATLQGQQPH---KSSDSLRRTSTHADLEPRSVSTPVARLSKWPKNIFFASDFIAKKTASPTSARR------KGPRRRTRTSTTDAREADSSRRTTMGVRELPTHHRINKDTAARGSSDARKRAVPQSIQGHIEREESGPDAARSGERGTFLEESASGLLLLHSRFFGGVRQEEDIVCRLCMLCREAGWMANPLRACPGLDPLVLEKMAVSRLRNTGCCDVVSRQRNSANDHSKNNLSHPEEV-FSFEIFYRILADIATLVYPREE----------KAMHRLLLEGVLPLAADNEPRIWSPRPELLYGRPALAALRMQRDALHHLYCTYESIARTENGSGGITRGIFLK----MLIDLGIAPVPVSAQHAASVFNDVLRNGLVGAESPFVRKQR-EETRAAHMVDEGGDVFMEAENGRRVPCPSREPWGDRLCWSIFLEAMAALAVGAVKKGYT 1305
            L S QATLQ QQ      S++S R T T++     + S PVA LSKWPKN+FFASDFIA K A+    +R      +G   R R +  + +E     R  +G +   T    N+ T    +S   +     S++     E S   +    E   FLEESAS LLLLHSRFFG  R  +D+V  LC LCREAGWM NPL  C  LDPLV+E++ + RLR     DV  ++ N+ +  S     H E+  FSFE FY+ILAD+A LVY  E           +AMHRLL EGVLPLA DN+PR WSPR E+L+GRPALAALRMQRD L  LYCTY    R  +G+ G+ R  FL+    ML DLG++PV V+ QHAASVF+D++RNGL        R+Q   E         G    M  E    +P  S +P G RLCWS+FLEAMAALAVGAVK G +
Sbjct:   33 LASKQATLQSQQSQDVGNSANSRRPTPTYSKTGSGAFSKPVAHLSKWPKNVFFASDFIADKAAAAACRKRSTVKSSRGAAPRCRRNAGEGKEMGRGSRV-LGEKAPVTRMNENRSTTVFCTSGGGRAFQQNSVRSSENGEGSTGASVACDEEALFLEESASALLLLHSRFFGRARHPDDVVSSLCTLCREAGWMGNPLVVC-SLDPLVVEEIVIERLRRNHHTDVGWQRHNNNSGGSSTPAQHYEDYDFSFEDFYQILADVAGLVYSIEAHEERQRAKPGRAMHRLLTEGVLPLAEDNQPRRWSPRSEMLFGRPALAALRMQRDTLRELYCTYNKDTRARDGASGLNRNQFLEASVGMLTDLGVSPVSVTEQHAASVFDDIIRNGLPVTGPSIGRRQSWGEGTVLGASGRGDHCLMAGERYSGLPSSSNKPGGGRLCWSLFLEAMAALAVGAVKNGQS 488
[Close]
BLAST of mRNA_L-elsbetiae_contig1423.3142.1 vs. uniprot
Match: D7G6P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P3_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.850e-93
Identity = 203/455 (44.62%), Postives = 255/455 (56.04%), Query Frame = 1 
Query:   19 QATLQGQQPHKSSDSLRRTSTHADLEPRSVSTPVARLSKWPKNIFFASDFIAKKTASPTSARRK-------GPRRRTRTSTTDAREADSSRRTTMGVRELPTHHRINKDTA----ARGSSDARKRAVPQSIQGHIEREESGPDAARSGERGTFLEESASGLLLLHSRFF-GGVRQEEDIVCRLCMLCREAGWMANPLRACPGLDPLVLEKMAVSRLRNTGCCDVV-SRQRNSANDHSKNNLSHPEEVFSFEIFYRILADIATLVYPREE----------KAMHRLLLEGVLPLAADNEPRIWSPRPELLYGRPALAALRMQRDALHHLYCTYESIARTENGSGGITRGIFLKMLIDLGIAPVPVSAQHAASVFNDVLRNGL-VGAESPFVRKQREETRAAHMVDEGGDVFMEAENGRRVPCPSREPWGDRLCWSIFLEAMAALAVGAVKKGYTTT 1311
            QATLQ Q    S++S R +  ++     + STPV RLSKWPKN+FFASDFIA K A+    +R        G   R R +  + +      R  MG     T  + N  T     + G    ++ +V  S+ G   R     DA+ +G+                     GG R EED+VC LC LCREAGWM NPL  CPGLDPL +E++ + RLR     DV   R  N++   S+    + ++ FSFE FY+ LAD+A LVYPRE           +AM+RLL EGVLPLA DN+PR WSPR E+L+GRPALAALRMQRD LH LYC Y    R  +G+ G+ R  FLKML DLG++PV V+ QHAASVF+D++RNGL V   S   R    E       D G    M  E    V   SR+P G RLCWS+FLEAMAALAVGAVK G + +
Sbjct:    9 QATLQSQDVENSTNSRRPSPKYSKTGSGAFSTPVVRLSKWPKNVFFASDFIADKAAAAACRKRSTGKSSRGGAAPRCRRNAGEGKTMGRGSRA-MGEEAPVTRMKENSSTTVFRTSGGGGAFQQHSVRSSVDGEARR-----DASVAGDXXXXXXXXXXXXXXXXXXXXXGGARHEEDVVCSLCTLCREAGWMGNPLGVCPGLDPLAVEEIVMERLRRNHHTDVAWKRHSNNSGGSSRPAKHYTDDGFSFEDFYQTLADVAGLVYPREAQEERRRAKPGRAMYRLLTEGVLPLAEDNQPRHWSPRSEMLFGRPALAALRMQRDTLHELYCIYNKDTRARDGASGLNRNQFLKMLTDLGVSPVSVTEQHAASVFDDIIRNGLPVTGPSSDGRHSWGEGAIHEASDRGDYCLMGGERNNGVSSSSRKPGGGRLCWSLFLEAMAALAVGAVKNGQSVS 457
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1423.3142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K005_9PHAE6.360e-9546.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6P3_ECTSI1.850e-9344.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1423contigL-elsbetiae_contig1423:20832..25525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-26_000160.1
Exons6
Model size3192
Cds size3192
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1423.3142.1prot_L-elsbetiae_contig1423.3142.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1423 20832..25525 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815567.733312-CDS-L-elsbetiae_contig1423:20831..216941622815567.733312-CDS-L-elsbetiae_contig1423:20831..21694Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 20832..21694 +
1691682964.2906618-CDS-L-elsbetiae_contig1423:20831..216941691682964.2906618-CDS-L-elsbetiae_contig1423:20831..21694Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 20832..21694 +
1622815567.74371-CDS-L-elsbetiae_contig1423:22029..221711622815567.74371-CDS-L-elsbetiae_contig1423:22029..22171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 22030..22171 +
1691682964.2995431-CDS-L-elsbetiae_contig1423:22029..221711691682964.2995431-CDS-L-elsbetiae_contig1423:22029..22171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 22030..22171 +
1622815567.7536497-CDS-L-elsbetiae_contig1423:22421..226821622815567.7536497-CDS-L-elsbetiae_contig1423:22421..22682Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 22422..22682 +
1691682964.308318-CDS-L-elsbetiae_contig1423:22421..226821691682964.308318-CDS-L-elsbetiae_contig1423:22421..22682Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 22422..22682 +
1622815567.7645392-CDS-L-elsbetiae_contig1423:23016..245941622815567.7645392-CDS-L-elsbetiae_contig1423:23016..24594Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 23017..24594 +
1691682964.3173459-CDS-L-elsbetiae_contig1423:23016..245941691682964.3173459-CDS-L-elsbetiae_contig1423:23016..24594Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 23017..24594 +
1622815567.775248-CDS-L-elsbetiae_contig1423:24708..248871622815567.775248-CDS-L-elsbetiae_contig1423:24708..24887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 24709..24887 +
1691682964.326333-CDS-L-elsbetiae_contig1423:24708..248871691682964.326333-CDS-L-elsbetiae_contig1423:24708..24887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 24709..24887 +
1622815567.7855487-CDS-L-elsbetiae_contig1423:25356..255251622815567.7855487-CDS-L-elsbetiae_contig1423:25356..25525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 25357..25525 +
1691682964.3371785-CDS-L-elsbetiae_contig1423:25356..255251691682964.3371785-CDS-L-elsbetiae_contig1423:25356..25525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 25357..25525 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1423.3142.1

>prot_L-elsbetiae_contig1423.3142.1 ID=prot_L-elsbetiae_contig1423.3142.1|Name=mRNA_L-elsbetiae_contig1423.3142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1064bp
MNLGSWQATLQGQQPHKSSDSLRRTSTHADLEPRSVSTPVARLSKWPKNI
FFASDFIAKKTASPTSARRKGPRRRTRTSTTDAREADSSRRTTMGVRELP
THHRINKDTAARGSSDARKRAVPQSIQGHIEREESGPDAARSGERGTFLE
ESASGLLLLHSRFFGGVRQEEDIVCRLCMLCREAGWMANPLRACPGLDPL
VLEKMAVSRLRNTGCCDVVSRQRNSANDHSKNNLSHPEEVFSFEIFYRIL
ADIATLVYPREEKAMHRLLLEGVLPLAADNEPRIWSPRPELLYGRPALAA
LRMQRDALHHLYCTYESIARTENGSGGITRGIFLKMLIDLGIAPVPVSAQ
HAASVFNDVLRNGLVGAESPFVRKQREETRAAHMVDEGGDVFMEAENGRR
VPCPSREPWGDRLCWSIFLEAMAALAVGAVKKGYTTTATIKGRNRKRVPN
PNRRRKADLYCSPREAGEDVREVRRPVRSPGEDRYPERRVLYHTSEEDEA
GETNSGKMENSGSCEVPPSGGNAREDPFSEIHHQATYGGGCYHDSRREVE
LMPTLREVDTLLEYPGSPERSRPPSRLQQAPQREESSVSVSVKLEPTARR
TATQLSPEAVARRAEKEEAATARHFGGTASRALENVDNHARGAVERPSME
HWRTMKEDTRASSSGRNHRAVDITPPGAARDNNVWVEHCSTATKAGKTKE
KTGRVPTIRATADIGCSIPQELVVFEQAPSPPLAVARPKGDERRQGTSSN
DFRRTPTARATAREEVPNTVVARCREISRPKVVASGTAMEVIDDAVLCGR
DEVGLPRRRGTLGVRKATASIGAPADNQPTVTHPPASLVSRGDGMDNREV
GGLSAAPYHGGPSFAVQAPSSTTPAASEGSRGPPRRARARSRKQPAEPLP
GLGSRTDKPASLHPPYCHSTGFASDTPSGGGGGGGGGGQNVKRIGTISCK
EGLHGSGSVPLREDCSERREERLDHEADIDDVSMSFEAASTTIFEELLEP
RVAAVYSSHRKELLKLYQRYSSVGPGGEQFKYITESGIWRLVGDFPVLGR
WAEGHSTLQWIIR*
back to top

mRNA from alignment at L-elsbetiae_contig1423:20832..25525+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1423.3142.1 ID=mRNA_L-elsbetiae_contig1423.3142.1|Name=mRNA_L-elsbetiae_contig1423.3142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4694bp|location=Sequence derived from alignment at L-elsbetiae_contig1423:20832..25525+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACTTGGGCTCGTGGCAGGCAACGCTTCAAGGCCAGCAACCTCACAA
GTCCAGCGACTCATTACGACGCACATCAACGCACGCCGATCTTGAACCAA
GATCTGTCTCAACGCCAGTGGCTCGGCTATCTAAGTGGCCAAAGAACATA
TTTTTCGCCAGCGACTTCATCGCTAAAAAGACTGCTAGTCCCACTAGCGC
CAGACGTAAGGGACCCCGCCGGCGTACACGTACAAGTACTACCGATGCAA
GAGAGGCCGACAGCAGCCGGCGGACAACCATGGGGGTTCGTGAGCTCCCC
ACTCATCATCGGATCAACAAGGACACCGCAGCACGCGGGTCGTCGGATGC
AAGGAAGAGAGCGGTGCCGCAGAGCATTCAAGGGCATATTGAGCGTGAAG
AGAGCGGACCTGATGCTGCGAGGAGTGGGGAAAGAGGAACCTTTCTCGAG
GAATCTGCTTCAGGGCTACTGCTTCTACACTCACGCTTCTTCGGCGGAGT
GAGGCAGGAAGAAGACATCGTGTGTCGGTTGTGTATGCTGTGCAGAGAGG
CGGGATGGATGGCCAACCCTCTCAGGGCTTGCCCTGGCCTCGATCCTCTT
GTTCTGGAAAAAATGGCGGTGTCACGACTACGAAATACGGGTTGCTGTGA
CGTCGTGAGCCGGCAGCGCAACAGTGCTAACGATCACTCGAAGAACAATC
TCTCACATCCTGAGGAGGTGTTTTCTTTCGAGATTTTTTACAGGATTCTT
GCCGACATAGCCACTCTGGTATACCCACGCGAGGAGAAAGCGATGCATAG
GCTGCTGTTGGAAGGAGTTCTGCCTTTGGCCGCGGACAATGAACCACGCA
TATGGTCGCCAAGGTAGGCAAGCCAGCTTTACTCCACGGAGCTTTGAGCC
TCGTGCTCTCCTCTCTTCAAGTTGTTTTAGATGCCATGCTTCCGAAGTGA
TGACTGCCCAATCATTGGCAGAACTGCCGACGTTCTGTCGTCGTGGTAAG
CCCGGTGTTTTCTGAAAAACTACCGGTACGCTCTTTCTTTGAAATATCAG
TGTCGTTTTTTGCAAGATGCGTGCGACGGGGATTTTGATGAAGCCATTTG
GTCGACCTGCCGGAATCTGCAGATATCCCGGCAAGCTTGATGTAAACACG
TGGTGGTTTTCGTCGGTGTTGCACCTTGAAATGTTTTTGCCTTGCCAGAC
CCGAGTTGCTGTACGGCCGTCCCGCCTTGGCAGCCTTGCGCATGCAACGT
GACGCACTGCATCACCTCTACTGTACTTACGAAAGCATTGCGAGGACAGA
AAACGGTTCAGGCGGTATCACCAGAGGTATATTTTTAAAGGTGAGCGAGT
TAGGACACAGGCAAGGAGCGTAGGTGTTCGAAACTGATGTCGCGCACAGA
CCCGATTCCGAACGCCTCCTGGTACAGCTACTACAGTACGGTGTTGAATT
GCATCGTGTCGTTTTTTCAACTTTGGAGGTTATGCGCGCACCATGTGAGT
CTAAATATAGCATCGACAAAAACTAAAGACTGGTGTAGTAGAGTCCAGCC
GTTGACAGCGACGTGCCCACTACCTCGCGCTGTTTGGCAGATGTTGATAG
ATCTAGGCATTGCCCCGGTGCCCGTTTCGGCACAACACGCTGCATCGGTC
TTCAACGATGTCTTACGGAACGGTCTGGTGGGTGCTGAGTCCCCATTTGT
CCGTAAGCAGCGGGAGGAAACCAGAGCTGCCCACATGGTTGATGAAGGCG
GTGACGTTTTTATGGAGGCTGAAAATGGCAGACGGGTGCCTTGCCCTTCA
AGGGAGCCTTGGGGAGATCGGCTATGCTGGAGTATTTTTCTGGAAGCGAT
GGTGAGTGCCTTGTACACAACAGGCTCGGTTGTGCCTGATTACGACGACG
TTGCACACTGGTCATCTATTTTCCCATCAAACGAGAGCTCTTGCGCTATG
TGTGTGGTGCGTCGGTGTGGTCGCCATTTGCAACGCAATCTGTCGATTTT
TAGATATTGCGCACGTGATTTAACCTGAATCGGTGATCGTCTTTCTCCCG
TATGAAACCCTCAAAGTACGCGCCTGATTGGCCCGCAAGATCCCGTTTCT
GATGCCGCTCTCCGATCGATCACACTGCTTTGACGAATCACCAATCGTCG
GTCTTTACGTTGGTTCCTTCAATACATATATGTAGGCGGCTCTTGCTGTC
GGGGCCGTAAAAAAAGGGTACACTACTACTGCCACCATCAAGGGCCGGAA
TCGCAAGCGGGTGCCTAATCCGAACCGCAGGAGAAAGGCAGACCTCTACT
GCAGCCCCAGAGAGGCGGGAGAGGACGTTCGAGAAGTCAGACGACCTGTG
CGCTCGCCGGGTGAGGATCGGTATCCCGAACGGCGTGTGTTATACCACAC
ATCCGAAGAAGACGAGGCCGGTGAGACAAATTCAGGCAAAATGGAGAACT
CGGGGTCCTGCGAAGTGCCACCTTCAGGCGGGAATGCTCGCGAAGACCCG
TTCTCGGAGATACATCACCAGGCAACGTACGGCGGAGGCTGCTACCACGA
TTCAAGAAGGGAGGTGGAGCTTATGCCAACACTCCGAGAAGTAGACACTC
TCCTAGAGTATCCAGGCTCGCCAGAGCGCTCTCGGCCACCTTCTCGTCTG
CAGCAGGCGCCCCAAAGAGAAGAGTCCAGCGTCAGCGTCAGCGTCAAGCT
AGAACCAACGGCCCGCCGAACGGCCACTCAACTCTCGCCGGAAGCGGTTG
CCAGGAGAGCAGAGAAAGAAGAAGCGGCGACGGCGAGACACTTTGGTGGC
ACCGCCTCTCGAGCTCTTGAAAACGTTGACAACCATGCTCGGGGGGCGGT
AGAGCGCCCCTCGATGGAGCACTGGCGCACGATGAAGGAGGACACGCGCG
CCTCTTCAAGTGGGAGGAATCATCGAGCAGTGGATATCACCCCACCGGGT
GCAGCGCGTGACAACAACGTCTGGGTCGAACACTGTTCCACTGCCACTAA
GGCGGGAAAGACTAAGGAAAAGACGGGCAGGGTCCCGACGATTAGAGCCA
CGGCAGATATTGGGTGTTCGATTCCGCAAGAACTCGTGGTGTTCGAGCAA
GCACCGAGCCCGCCACTCGCCGTTGCTCGGCCGAAAGGGGATGAGCGGCG
TCAAGGCACTTCATCCAACGATTTTCGACGAACCCCAACGGCACGGGCAA
CGGCGAGGGAGGAAGTCCCCAACACCGTCGTTGCTCGGTGTCGGGAAATT
TCGAGGCCCAAGGTGGTCGCGTCGGGCACCGCTATGGAAGTCATCGACGA
CGCCGTGCTCTGTGGCCGAGACGAGGTCGGCTTGCCGAGACGTCGCGGAA
CGCTCGGAGTCCGCAAAGCGACCGCAAGTATTGGCGCGCCTGCTGACAAT
CAGCCGACGGTGACCCACCCCCCTGCTTCGCTTGTATCGAGGGGGGATGG
TATGGATAACAGAGAAGTGGGTGGGCTATCGGCGGCGCCGTATCACGGGG
GCCCGTCGTTTGCTGTGCAAGCGCCCTCGTCCACGACACCGGCTGCTTCG
GAGGGCTCGAGGGGGCCGCCCCGTCGTGCGCGTGCTCGCTCGAGAAAACA
ACCAGCGGAGCCTCTCCCGGGCCTGGGAAGTCGCACCGATAAACCCGCTT
CCCTTCACCCGCCATATTGTCATTCGACTGGCTTTGCTTCGGACACGCCT
TCCGGCGGCGGCGGCGGCGGTGGGGGTGGTGGCCAGAATGTTAAAAGGAT
TGGCACCATTTCAGTTGCCAGAACTGCACCTGAGAGCTACCGGGAGGAAG
ATTCAACCCTTCGTCGTGGTCAGGAGATGGTCCTAGAGGAACCGTTGCGT
CCAGGCTGGGGTGGGGGTGGACGCAAGTGCAAGGAAGGGCTCCACGGCAG
TGGAAGCGTCCCGCTGCGCGAAGACTGCAGCGAGAGGAGGGAGGAGAGGC
TCGACCACGAGGCAGACATCGACGACGTTTCCATGAGCTTTGAGGCGGCG
AGCACCACCATATTTGAGGAATTGCTCGAACCTAGGGTTGCAGCCGTTTA
CTCCAGGTGGGACTAAGGCGACAGCGCGAAATAATATCGTAGGATTAGAT
ACACACAATAAATGACTTTTCCAGGGGTGCAGGGGATCAGACTAGCCGCT
GGTGGCATGGTAGTGGCATAGCGCCTGGGTTGTGAAGTGACACGTTGCGT
GCGACTTCAAGAAATTCGATTTACCCGGATGGCGTTCGGTGTCCCCCAAG
TTCAGATATTCAGTCACATGCCATTTCTGTCAGCTCGCTTTGGCAAATTG
CTCCAATAACCCGTTTGCCAAGATAGAACTTCGACTTGCGAACTTATTTT
TTGGCAGTGCTCTCTCCATGTAGCTTCTTGAACTCTACTCGGTGGCGATC
GTGCTTGGAACTATGAGATACTAGCCATAGATAACCATCGAGTCGCGCTG
GAGGAGGCAAATAACCACCACTTTTTGAGCCCTGCCTTTGTTCGATCGAT
CATGTCACGGACACGTTCCATCCAGCCACCGGAAAGAACTACTGAAGTTG
TATCAGCGGTACAGCAGCGTTGGGCCCGGCGGCGAGCAGTTCAAATATAT
CACCGAATCAGGTATCTGGAGACTCGTCGGCGACTTCCCTGTTCTTGGGC
GATGGGCCGAAGGCCACAGCACCCTGCAGTGGATCATACGGTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1423:20832..25525+

>mRNA_L-elsbetiae_contig1423.3142.1 ID=mRNA_L-elsbetiae_contig1423.3142.1|Name=mRNA_L-elsbetiae_contig1423.3142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6384bp|location=Sequence derived from alignment at L-elsbetiae_contig1423:20832..25525+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACTTGGGCTCGTGGCAGGCAACGCTTCAAGGCCAGCAACCTCACAA
GTCCAGCGACTCATTACGACGCACATCAACGCACGCCGATCTTGAACCAA
GATCTGTCTCAACGCCAGTGGCTCGGCTATCTAAGTGGCCAAAGAACATA
TTTTTCGCCAGCGACTTCATCGCTAAAAAGACTGCTAGTCCCACTAGCGC
CAGACGTAAGGGACCCCGCCGGCGTACACGTACAAGTACTACCGATGCAA
GAGAGGCCGACAGCAGCCGGCGGACAACCATGGGGGTTCGTGAGCTCCCC
ACTCATCATCGGATCAACAAGGACACCGCAGCACGCGGGTCGTCGGATGC
AAGGAAGAGAGCGGTGCCGCAGAGCATTCAAGGGCATATTGAGCGTGAAG
AGAGCGGACCTGATGCTGCGAGGAGTGGGGAAAGAGGAACCTTTCTCGAG
GAATCTGCTTCAGGGCTACTGCTTCTACACTCACGCTTCTTCGGCGGAGT
GAGGCAGGAAGAAGACATCGTGTGTCGGTTGTGTATGCTGTGCAGAGAGG
CGGGATGGATGGCCAACCCTCTCAGGGCTTGCCCTGGCCTCGATCCTCTT
GTTCTGGAAAAAATGGCGGTGTCACGACTACGAAATACGGGTTGCTGTGA
CGTCGTGAGCCGGCAGCGCAACAGTGCTAACGATCACTCGAAGAACAATC
TCTCACATCCTGAGGAGGTGTTTTCTTTCGAGATTTTTTACAGGATTCTT
GCCGACATAGCCACTCTGGTATACCCACGCGAGGAGAAAGCGATGCATAG
GCTGCTGTTGGAAGGAGTTCTGCCTTTGGCCGCGGACAATGAACCACGCA
TATGGTCGCCAAGATGAACTTGGGCTCGTGGCAGGCAACGCTTCAAGGCC
AGCAACCTCACAAGTCCAGCGACTCATTACGACGCACATCAACGCACGCC
GATCTTGAACCAAGATCTGTCTCAACGCCAGTGGCTCGGCTATCTAAGTG
GCCAAAGAACATATTTTTCGCCAGCGACTTCATCGCTAAAAAGACTGCTA
GTCCCACTAGCGCCAGACGTAAGGGACCCCGCCGGCGTACACGTACAAGT
ACTACCGATGCAAGAGAGGCCGACAGCAGCCGGCGGACAACCATGGGGGT
TCGTGAGCTCCCCACTCATCATCGGATCAACAAGGACACCGCAGCACGCG
GGTCGTCGGATGCAAGGAAGAGAGCGGTGCCGCAGAGCATTCAAGGGCAT
ATTGAGCGTGAAGAGAGCGGACCTGATGCTGCGAGGAGTGGGGAAAGAGG
AACCTTTCTCGAGGAATCTGCTTCAGGGCTACTGCTTCTACACTCACGCT
TCTTCGGCGGAGTGAGGCAGGAAGAAGACATCGTGTGTCGGTTGTGTATG
CTGTGCAGAGAGGCGGGATGGATGGCCAACCCTCTCAGGGCTTGCCCTGG
CCTCGATCCTCTTGTTCTGGAAAAAATGGCGGTGTCACGACTACGAAATA
CGGGTTGCTGTGACGTCGTGAGCCGGCAGCGCAACAGTGCTAACGATCAC
TCGAAGAACAATCTCTCACATCCTGAGGAGGTGTTTTCTTTCGAGATTTT
TTACAGGATTCTTGCCGACATAGCCACTCTGGTATACCCACGCGAGGAGA
AAGCGATGCATAGGCTGCTGTTGGAAGGAGTTCTGCCTTTGGCCGCGGAC
AATGAACCACGCATATGGTCGCCAAGACCCGAGTTGCTGTACGGCCGTCC
CGCCTTGGCAGCCTTGCGCATGCAACGTGACGCACTGCATCACCTCTACT
GTACTTACGAAAGCATTGCGAGGACAGAAAACGGTTCAGGCGGTATCACC
AGAGGTATATTTTTAAAGACCCGAGTTGCTGTACGGCCGTCCCGCCTTGG
CAGCCTTGCGCATGCAACGTGACGCACTGCATCACCTCTACTGTACTTAC
GAAAGCATTGCGAGGACAGAAAACGGTTCAGGCGGTATCACCAGAGGTAT
ATTTTTAAAGATGTTGATAGATCTAGGCATTGCCCCGGTGCCCGTTTCGG
CACAACACGCTGCATCGGTCTTCAACGATGTCTTACGGAACGGTCTGGTG
GGTGCTGAGTCCCCATTTGTCCGTAAGCAGCGGGAGGAAACCAGAGCTGC
CCACATGGTTGATGAAGGCGGTGACGTTTTTATGGAGGCTGAAAATGGCA
GACGGGTGCCTTGCCCTTCAAGGGAGCCTTGGGGAGATCGGCTATGCTGG
AGTATTTTTCTGGAAGCGATGATGTTGATAGATCTAGGCATTGCCCCGGT
GCCCGTTTCGGCACAACACGCTGCATCGGTCTTCAACGATGTCTTACGGA
ACGGTCTGGTGGGTGCTGAGTCCCCATTTGTCCGTAAGCAGCGGGAGGAA
ACCAGAGCTGCCCACATGGTTGATGAAGGCGGTGACGTTTTTATGGAGGC
TGAAAATGGCAGACGGGTGCCTTGCCCTTCAAGGGAGCCTTGGGGAGATC
GGCTATGCTGGAGTATTTTTCTGGAAGCGATGGCGGCTCTTGCTGTCGGG
GCCGTAAAAAAAGGGTACACTACTACTGCCACCATCAAGGGCCGGAATCG
CAAGCGGGTGCCTAATCCGAACCGCAGGAGAAAGGCAGACCTCTACTGCA
GCCCCAGAGAGGCGGGAGAGGACGTTCGAGAAGTCAGACGACCTGTGCGC
TCGCCGGGTGAGGATCGGTATCCCGAACGGCGTGTGTTATACCACACATC
CGAAGAAGACGAGGCCGGTGAGACAAATTCAGGCAAAATGGAGAACTCGG
GGTCCTGCGAAGTGCCACCTTCAGGCGGGAATGCTCGCGAAGACCCGTTC
TCGGAGATACATCACCAGGCAACGTACGGCGGAGGCTGCTACCACGATTC
AAGAAGGGAGGTGGAGCTTATGCCAACACTCCGAGAAGTAGACACTCTCC
TAGAGTATCCAGGCTCGCCAGAGCGCTCTCGGCCACCTTCTCGTCTGCAG
CAGGCGCCCCAAAGAGAAGAGTCCAGCGTCAGCGTCAGCGTCAAGCTAGA
ACCAACGGCCCGCCGAACGGCCACTCAACTCTCGCCGGAAGCGGTTGCCA
GGAGAGCAGAGAAAGAAGAAGCGGCGACGGCGAGACACTTTGGTGGCACC
GCCTCTCGAGCTCTTGAAAACGTTGACAACCATGCTCGGGGGGCGGTAGA
GCGCCCCTCGATGGAGCACTGGCGCACGATGAAGGAGGACACGCGCGCCT
CTTCAAGTGGGAGGAATCATCGAGCAGTGGATATCACCCCACCGGGTGCA
GCGCGTGACAACAACGTCTGGGTCGAACACTGTTCCACTGCCACTAAGGC
GGGAAAGACTAAGGAAAAGACGGGCAGGGTCCCGACGATTAGAGCCACGG
CAGATATTGGGTGTTCGATTCCGCAAGAACTCGTGGTGTTCGAGCAAGCA
CCGAGCCCGCCACTCGCCGTTGCTCGGCCGAAAGGGGATGAGCGGCGTCA
AGGCACTTCATCCAACGATTTTCGACGAACCCCAACGGCACGGGCAACGG
CGAGGGAGGAAGTCCCCAACACCGTCGTTGCTCGGTGTCGGGAAATTTCG
AGGCCCAAGGTGGTCGCGTCGGGCACCGCTATGGAAGTCATCGACGACGC
CGTGCTCTGTGGCCGAGACGAGGTCGGCTTGCCGAGACGTCGCGGAACGC
TCGGAGTCCGCAAAGCGACCGCAAGTATTGGCGCGCCTGCTGACAATCAG
CCGACGGTGACCCACCCCCCTGCTTCGCTTGTATCGAGGGGGGATGGTAT
GGATAACAGAGAAGTGGGTGGGCTATCGGCGGCGCCGTATCACGGGGGCC
CGTCGTTTGCTGTGCAAGCGCCCTCGTCCACGACACCGGCTGCTTCGGAG
GGCTCGAGGGGGCCGCCCCGTCGTGCGCGTGCTCGCTCGAGAAAACAACC
AGCGGAGCCTCTCCCGGGCCTGGGAAGTCGCACCGATAAACCCGCTTCCC
TTCACCCGCCATATTGTCATTCGACTGGCTTTGCTTCGGACACGCCTTCC
GGCGGCGGCGGCGGCGGTGGGGGTGGTGGCCAGAATGTTAAAAGGATTGG
CACCATTTCAGCGGCTCTTGCTGTCGGGGCCGTAAAAAAAGGGTACACTA
CTACTGCCACCATCAAGGGCCGGAATCGCAAGCGGGTGCCTAATCCGAAC
CGCAGGAGAAAGGCAGACCTCTACTGCAGCCCCAGAGAGGCGGGAGAGGA
CGTTCGAGAAGTCAGACGACCTGTGCGCTCGCCGGGTGAGGATCGGTATC
CCGAACGGCGTGTGTTATACCACACATCCGAAGAAGACGAGGCCGGTGAG
ACAAATTCAGGCAAAATGGAGAACTCGGGGTCCTGCGAAGTGCCACCTTC
AGGCGGGAATGCTCGCGAAGACCCGTTCTCGGAGATACATCACCAGGCAA
CGTACGGCGGAGGCTGCTACCACGATTCAAGAAGGGAGGTGGAGCTTATG
CCAACACTCCGAGAAGTAGACACTCTCCTAGAGTATCCAGGCTCGCCAGA
GCGCTCTCGGCCACCTTCTCGTCTGCAGCAGGCGCCCCAAAGAGAAGAGT
CCAGCGTCAGCGTCAGCGTCAAGCTAGAACCAACGGCCCGCCGAACGGCC
ACTCAACTCTCGCCGGAAGCGGTTGCCAGGAGAGCAGAGAAAGAAGAAGC
GGCGACGGCGAGACACTTTGGTGGCACCGCCTCTCGAGCTCTTGAAAACG
TTGACAACCATGCTCGGGGGGCGGTAGAGCGCCCCTCGATGGAGCACTGG
CGCACGATGAAGGAGGACACGCGCGCCTCTTCAAGTGGGAGGAATCATCG
AGCAGTGGATATCACCCCACCGGGTGCAGCGCGTGACAACAACGTCTGGG
TCGAACACTGTTCCACTGCCACTAAGGCGGGAAAGACTAAGGAAAAGACG
GGCAGGGTCCCGACGATTAGAGCCACGGCAGATATTGGGTGTTCGATTCC
GCAAGAACTCGTGGTGTTCGAGCAAGCACCGAGCCCGCCACTCGCCGTTG
CTCGGCCGAAAGGGGATGAGCGGCGTCAAGGCACTTCATCCAACGATTTT
CGACGAACCCCAACGGCACGGGCAACGGCGAGGGAGGAAGTCCCCAACAC
CGTCGTTGCTCGGTGTCGGGAAATTTCGAGGCCCAAGGTGGTCGCGTCGG
GCACCGCTATGGAAGTCATCGACGACGCCGTGCTCTGTGGCCGAGACGAG
GTCGGCTTGCCGAGACGTCGCGGAACGCTCGGAGTCCGCAAAGCGACCGC
AAGTATTGGCGCGCCTGCTGACAATCAGCCGACGGTGACCCACCCCCCTG
CTTCGCTTGTATCGAGGGGGGATGGTATGGATAACAGAGAAGTGGGTGGG
CTATCGGCGGCGCCGTATCACGGGGGCCCGTCGTTTGCTGTGCAAGCGCC
CTCGTCCACGACACCGGCTGCTTCGGAGGGCTCGAGGGGGCCGCCCCGTC
GTGCGCGTGCTCGCTCGAGAAAACAACCAGCGGAGCCTCTCCCGGGCCTG
GGAAGTCGCACCGATAAACCCGCTTCCCTTCACCCGCCATATTGTCATTC
GACTGGCTTTGCTTCGGACACGCCTTCCGGCGGCGGCGGCGGCGGTGGGG
GTGGTGGCCAGAATGTTAAAAGGATTGGCACCATTTCATGCAAGGAAGGG
CTCCACGGCAGTGGAAGCGTCCCGCTGCGCGAAGACTGCAGCGAGAGGAG
GGAGGAGAGGCTCGACCACGAGGCAGACATCGACGACGTTTCCATGAGCT
TTGAGGCGGCGAGCACCACCATATTTGAGGAATTGCTCGAACCTAGGGTT
GCAGCCGTTTACTCCAGTGCAAGGAAGGGCTCCACGGCAGTGGAAGCGTC
CCGCTGCGCGAAGACTGCAGCGAGAGGAGGGAGGAGAGGCTCGACCACGA
GGCAGACATCGACGACGTTTCCATGAGCTTTGAGGCGGCGAGCACCACCA
TATTTGAGGAATTGCTCGAACCTAGGGTTGCAGCCGTTTACTCCAGCCAC
CGGAAAGAACTACTGAAGTTGTATCAGCGGTACAGCAGCGTTGGGCCCGG
CGGCGAGCAGTTCAAATATATCACCGAATCAGGTATCTGGAGACTCGTCG
GCGACTTCCCTGTTCTTGGGCGATGGGCCGAAGGCCACAGCACCCTGCAG
TGGATCATACGGTAACCACCGGAAAGAACTACTGAAGTTGTATCAGCGGT
ACAGCAGCGTTGGGCCCGGCGGCGAGCAGTTCAAATATATCACCGAATCA
GGTATCTGGAGACTCGTCGGCGACTTCCCTGTTCTTGGGCGATGGGCCGA
AGGCCACAGCACCCTGCAGTGGATCATACGGTAA
back to top