prot_L-elsbetiae_contig1423.3142.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1423.3142.1
Unique Nameprot_L-elsbetiae_contig1423.3142.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1064
Homology
BLAST of mRNA_L-elsbetiae_contig1423.3142.1 vs. uniprot
Match: A0A6H5K005_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K005_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.360e-95
Identity = 212/458 (46.29%), Postives = 264/458 (57.64%), Query Frame = 0
Query:    3 LGSWQATLQGQQPH---KSSDSLRRTSTHADLEPRSVSTPVARLSKWPKNIFFASDFIAKKTASPTSARR------KGPRRRTRTSTTDAREADSSRRTTMGVRELPTHHRINKDTAARGSSDARKRAVPQSIQGHIEREESGPDAARSGERGTFLEESASGLLLLHSRFFGGVRQEEDIVCRLCMLCREAGWMANPLRACPGLDPLVLEKMAVSRLRNTGCCDVVSRQRNSANDHSKNNLSHPEEV-FSFEIFYRILADIATLVYPREE----------KAMHRLLLEGVLPLAADNEPRIWSPRPELLYGRPALAALRMQRDALHHLYCTYESIARTENGSGGITRGIFLK----MLIDLGIAPVPVSAQHAASVFNDVLRNGLVGAESPFVRKQR-EETRAAHMVDEGGDVFMEAENGRRVPCPSREPWGDRLCWSIFLEAMAALAVGAVKKGYT 435
            L S QATLQ QQ      S++S R T T++     + S PVA LSKWPKN+FFASDFIA K A+    +R      +G   R R +  + +E     R  +G +   T    N+ T    +S   +     S++     E S   +    E   FLEESAS LLLLHSRFFG  R  +D+V  LC LCREAGWM NPL  C  LDPLV+E++ + RLR     DV  ++ N+ +  S     H E+  FSFE FY+ILAD+A LVY  E           +AMHRLL EGVLPLA DN+PR WSPR E+L+GRPALAALRMQRD L  LYCTY    R  +G+ G+ R  FL+    ML DLG++PV V+ QHAASVF+D++RNGL        R+Q   E         G    M  E    +P  S +P G RLCWS+FLEAMAALAVGAVK G +
Sbjct:   33 LASKQATLQSQQSQDVGNSANSRRPTPTYSKTGSGAFSKPVAHLSKWPKNVFFASDFIADKAAAAACRKRSTVKSSRGAAPRCRRNAGEGKEMGRGSRV-LGEKAPVTRMNENRSTTVFCTSGGGRAFQQNSVRSSENGEGSTGASVACDEEALFLEESASALLLLHSRFFGRARHPDDVVSSLCTLCREAGWMGNPLVVC-SLDPLVVEEIVIERLRRNHHTDVGWQRHNNNSGGSSTPAQHYEDYDFSFEDFYQILADVAGLVYSIEAHEERQRAKPGRAMHRLLTEGVLPLAEDNQPRRWSPRSEMLFGRPALAALRMQRDTLRELYCTYNKDTRARDGASGLNRNQFLEASVGMLTDLGVSPVSVTEQHAASVFDDIIRNGLPVTGPSIGRRQSWGEGTVLGASGRGDHCLMAGERYSGLPSSSNKPGGGRLCWSLFLEAMAALAVGAVKNGQS 488          
BLAST of mRNA_L-elsbetiae_contig1423.3142.1 vs. uniprot
Match: D7G6P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P3_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.850e-93
Identity = 203/455 (44.62%), Postives = 255/455 (56.04%), Query Frame = 0
Query:    7 QATLQGQQPHKSSDSLRRTSTHADLEPRSVSTPVARLSKWPKNIFFASDFIAKKTASPTSARRK-------GPRRRTRTSTTDAREADSSRRTTMGVRELPTHHRINKDTA----ARGSSDARKRAVPQSIQGHIEREESGPDAARSGERGTFLEESASGLLLLHSRFF-GGVRQEEDIVCRLCMLCREAGWMANPLRACPGLDPLVLEKMAVSRLRNTGCCDVV-SRQRNSANDHSKNNLSHPEEVFSFEIFYRILADIATLVYPREE----------KAMHRLLLEGVLPLAADNEPRIWSPRPELLYGRPALAALRMQRDALHHLYCTYESIARTENGSGGITRGIFLKMLIDLGIAPVPVSAQHAASVFNDVLRNGL-VGAESPFVRKQREETRAAHMVDEGGDVFMEAENGRRVPCPSREPWGDRLCWSIFLEAMAALAVGAVKKGYTTT 437
            QATLQ Q    S++S R +  ++     + STPV RLSKWPKN+FFASDFIA K A+    +R        G   R R +  + +      R  MG     T  + N  T     + G    ++ +V  S+ G   R     DA+ +G+                     GG R EED+VC LC LCREAGWM NPL  CPGLDPL +E++ + RLR     DV   R  N++   S+    + ++ FSFE FY+ LAD+A LVYPRE           +AM+RLL EGVLPLA DN+PR WSPR E+L+GRPALAALRMQRD LH LYC Y    R  +G+ G+ R  FLKML DLG++PV V+ QHAASVF+D++RNGL V   S   R    E       D G    M  E    V   SR+P G RLCWS+FLEAMAALAVGAVK G + +
Sbjct:    9 QATLQSQDVENSTNSRRPSPKYSKTGSGAFSTPVVRLSKWPKNVFFASDFIADKAAAAACRKRSTGKSSRGGAAPRCRRNAGEGKTMGRGSRA-MGEEAPVTRMKENSSTTVFRTSGGGGAFQQHSVRSSVDGEARR-----DASVAGDXXXXXXXXXXXXXXXXXXXXXGGARHEEDVVCSLCTLCREAGWMGNPLGVCPGLDPLAVEEIVMERLRRNHHTDVAWKRHSNNSGGSSRPAKHYTDDGFSFEDFYQTLADVAGLVYPREAQEERRRAKPGRAMYRLLTEGVLPLAEDNQPRHWSPRSEMLFGRPALAALRMQRDTLHELYCIYNKDTRARDGASGLNRNQFLKMLTDLGVSPVSVTEQHAASVFDDIIRNGLPVTGPSSDGRHSWGEGAIHEASDRGDYCLMGGERNNGVSSSSRKPGGGRLCWSLFLEAMAALAVGAVKNGQSVS 457          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1423.3142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K005_9PHAE6.360e-9546.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6P3_ECTSI1.850e-9344.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1423contigL-elsbetiae_contig1423:20832..25525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1423.3142.1mRNA_L-elsbetiae_contig1423.3142.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1423 20832..25525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1423.3142.1 ID=prot_L-elsbetiae_contig1423.3142.1|Name=mRNA_L-elsbetiae_contig1423.3142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1064bp
MNLGSWQATLQGQQPHKSSDSLRRTSTHADLEPRSVSTPVARLSKWPKNI
FFASDFIAKKTASPTSARRKGPRRRTRTSTTDAREADSSRRTTMGVRELP
THHRINKDTAARGSSDARKRAVPQSIQGHIEREESGPDAARSGERGTFLE
ESASGLLLLHSRFFGGVRQEEDIVCRLCMLCREAGWMANPLRACPGLDPL
VLEKMAVSRLRNTGCCDVVSRQRNSANDHSKNNLSHPEEVFSFEIFYRIL
ADIATLVYPREEKAMHRLLLEGVLPLAADNEPRIWSPRPELLYGRPALAA
LRMQRDALHHLYCTYESIARTENGSGGITRGIFLKMLIDLGIAPVPVSAQ
HAASVFNDVLRNGLVGAESPFVRKQREETRAAHMVDEGGDVFMEAENGRR
VPCPSREPWGDRLCWSIFLEAMAALAVGAVKKGYTTTATIKGRNRKRVPN
PNRRRKADLYCSPREAGEDVREVRRPVRSPGEDRYPERRVLYHTSEEDEA
GETNSGKMENSGSCEVPPSGGNAREDPFSEIHHQATYGGGCYHDSRREVE
LMPTLREVDTLLEYPGSPERSRPPSRLQQAPQREESSVSVSVKLEPTARR
TATQLSPEAVARRAEKEEAATARHFGGTASRALENVDNHARGAVERPSME
HWRTMKEDTRASSSGRNHRAVDITPPGAARDNNVWVEHCSTATKAGKTKE
KTGRVPTIRATADIGCSIPQELVVFEQAPSPPLAVARPKGDERRQGTSSN
DFRRTPTARATAREEVPNTVVARCREISRPKVVASGTAMEVIDDAVLCGR
DEVGLPRRRGTLGVRKATASIGAPADNQPTVTHPPASLVSRGDGMDNREV
GGLSAAPYHGGPSFAVQAPSSTTPAASEGSRGPPRRARARSRKQPAEPLP
GLGSRTDKPASLHPPYCHSTGFASDTPSGGGGGGGGGGQNVKRIGTISCK
EGLHGSGSVPLREDCSERREERLDHEADIDDVSMSFEAASTTIFEELLEP
RVAAVYSSHRKELLKLYQRYSSVGPGGEQFKYITESGIWRLVGDFPVLGR
WAEGHSTLQWIIR*
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