mRNA_L-elsbetiae_contig1419.3113.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 8.830e-20 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 28 EVKPSTHLGCFTDRGGEERIFADKARSSSQMTSERCNSECAGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVYRF 312 E S+ +GC+ D + RI +S MT E C +EC+G +Y+GMQY T+C+CGG D QHGEST C CPG+ ++ CGG +++ VY + Sbjct: 185 ETSTSSLVGCYQDES-DARIMEFALTDTSSMTMEMCEAECSGNTYFGMQYGTECFCGGESTDLLQHGESTACDYECPGDSEQVCGGFYAMSVYSY 278
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.290e-19 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 40 STHLGCFTDRGGEERIFADKARSSSQMTSERCNSECAGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVYRF 312 S+ +GC+ D + RI SS MT ERC +EC G +Y+GMQY +C+CGG+ D QHGEST C CPG+ D+ CGG +++ VY + Sbjct: 839 SSFVGCYQDES-DARIMELALTDSSSMTKERCEAECTGNTYFGMQYGRECFCGGSSTDLLQHGESTSCDYECPGDSDQVCGGFYAMSVYSY 928
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 1.690e-17 Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 16 YRSREVKPSTHLGCFTDRGGEERIFADKARSSSQMTSERCNSECAGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVYRF 312 Y + S+ +GC+ D + R+ SS MT E C +EC G Y+GMQY ++C+CGG+ + ++GES+ C CPG+ ++ CGG +++ VY + Sbjct: 65 YTNESTPTSSFVGCYQDES-DARMMELALTDSSSMTKEMCEAECTGNRYFGMQYGSECFCGGSSTNLLENGESSACDYECPGDSEQECGGFYAMSVYSY 162
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: UPI000444A20B (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A20B) HSP 1 Score: 86.7 bits (213), Expect = 1.870e-17 Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 43 THLGCFTD---RGGEERIFADKARSSSQMTSERCNSEC--AGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVYRFG 315 TH+GC+TD R IF+D SS +T E C S C AG++Y G++Y QCWCG + + STGCT CPGN +E CGG W++DVYR G Sbjct: 610 THIGCYTDSDTRVLSTNIFSD----SSSLTIESCASSCTSAGWTYSGVEYGQQCWCGASISS--SASASTGCTYTCPGNSNELCGGNWAIDVYRAG 699
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: A0A6H5JVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT8_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 1.120e-13 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 1 WKMSIYRSR--EVKPSTHLGCFTDRGGEERIFADKARSSSQMTSERCNSECA--GFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVYRF 312 + MS+Y + EV PS + GCF D + R+F + S +T+E C C+ GFS+YG+QY QCWCG + ++ +G+ C PC G+ + CGG +S+D+Y Sbjct: 212 YAMSVYENDNVEVDPS-YRGCFADTA-DNRVF-HQTTSDFDLTTEHCGLLCSIEGFSFYGLQYSIQCWCGDHNTEYSANGDGV-CDMPCGGDAYDMCGGFYSMDIYSI 315
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: A0A165ABE4_XYLHT (WSC-domain-containing protein n=1 Tax=Xylona heveae (strain CBS 132557 / TC161) TaxID=1328760 RepID=A0A165ABE4_XYLHT) HSP 1 Score: 75.1 bits (183), Expect = 2.100e-13 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 7 MSIYRSREVKPS-THLGCFTDRGGEERIFADKARSSSQMTSERCNSECAGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVY 306 +++Y+ P +GC+T+ G R DK+ + S T E C + C+G+SY+G++Y +C+CG + GCT PC GN E CGG +D+Y Sbjct: 913 LNMYQKNSTTPGYVFMGCYTE-GTNARALPDKSTAGSSNTVESCYTFCSGYSYFGVEYSDECYCGNTLSTGSVPATDNGCTMPCAGNSTEMCGGPNRLDLY 1012
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: A0A4Q4Q087_9PLEO (WSC domain-containing protein n=1 Tax=Alternaria gaisen TaxID=167740 RepID=A0A4Q4Q087_9PLEO) HSP 1 Score: 72.8 bits (177), Expect = 2.880e-13 Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 4 KMSIYRSREVKPSTHLGCFTDRGGEERIFADKAR-SSSQMTSERCNSECAGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVY 306 ++S Y+ K +T+LGC D R+ DK+ S + +T ERC + CAGF Y+G+Q+ +C+CG QH + C+ PC G+ ++ CGG+ +VY Sbjct: 127 QLSTYQK---KTTTYLGCLVDSNN--RVLGDKSFVSEANLTVERCETLCAGFKYFGIQWGQECYCGNTFKYATQHKPESDCSLPCTGDKNQRCGGSLRSNVY 223
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: A0A8E2JB36_9PEZI (WSC-domain-containing protein n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2JB36_9PEZI) HSP 1 Score: 70.5 bits (171), Expect = 8.070e-13 Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 43 THLGCFTDRGGEERIFADKARSSSQMTSERCNSECAGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVY 306 T+ GC TD G R+ A++ + MT E C + CAG++Y+G +Y TQC+CG + A+ T C+ CPGN E CG + +Y Sbjct: 81 TYAGCHTDSVGA-RVLAEQYTYDNAMTVEECATFCAGYTYFGTEYGTQCFCGNSFANPTSEAAETDCSFLCPGNSQEYCGAGNRLTMY 167
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: A0A409YDM9_9AGAR (Uncharacterized protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409YDM9_9AGAR) HSP 1 Score: 70.9 bits (172), Expect = 2.090e-12 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 43 THLGCFTDRGGEERIFADKARSSSQMTS-ERCNSEC--AGFSYYGMQYETQCWCGGADADHDQHGESTGCTTPCPGNDDETCGGAWSVDVYRFG 315 T+LGCFTD G R+ ++ S+ S E C + C AGF+ G++Y +C+CG A +D +G S GCTTPCPG++ TCGG+ ++ +Y G Sbjct: 35 TNLGCFTDGGP--RVLREEQTSNLDAESFEYCGNICYDAGFALAGVEYGHECFCGNAIL-YD-YGTSEGCTTPCPGDESNTCGGSLAIQIYSTG 124
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Match: C3YQZ5_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YQZ5_BRAFL) HSP 1 Score: 71.2 bits (173), Expect = 4.740e-12 Identity = 40/102 (39.22%), Postives = 54/102 (52.94%), Query Frame = 1 Query: 28 EVKPSTHLGCFTDRGGEERIFADKARSSSQMTSERCNSECA--GFSYYGMQYETQCWCGGADADHDQHGE--STGCTTPCPGNDDETCGGAWSVDVYRFGDP 321 E HLGC+ D ERI + SSQ T C C G+S G++ +C+CG + D + E S GCT PC GN +ETCGG W++D+Y+ P Sbjct: 488 EASELVHLGCYVDYN--ERILKYERHISSQQTVVHCGYWCRKNGYSLAGVEGGEECYCGTSTHFVDLNSETPSGGCTMPCSGNSEETCGGGWAIDIYQVSAP 587 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1419.3113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1419.3113.1 >prot_L-elsbetiae_contig1419.3113.1 ID=prot_L-elsbetiae_contig1419.3113.1|Name=mRNA_L-elsbetiae_contig1419.3113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp MSIYRSREVKPSTHLGCFTDRGGEERIFADKARSSSQMTSERCNSECAGFback to top mRNA from alignment at L-elsbetiae_contig1419:18089..19637- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1419.3113.1 ID=mRNA_L-elsbetiae_contig1419.3113.1|Name=mRNA_L-elsbetiae_contig1419.3113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1549bp|location=Sequence derived from alignment at L-elsbetiae_contig1419:18089..19637- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1419:18089..19637- >mRNA_L-elsbetiae_contig1419.3113.1 ID=mRNA_L-elsbetiae_contig1419.3113.1|Name=mRNA_L-elsbetiae_contig1419.3113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig1419:18089..19637- (Laminarionema elsbetiae ELsaHSoW15)back to top |