mRNA_L-elsbetiae_contig14127.3077.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: D7G4E7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E7_ECTSI) HSP 1 Score: 179 bits (453), Expect = 9.110e-57 Identity = 86/92 (93.48%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 22 MSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 297 MS LD GRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPD+HLPSCSTCQVYLKLPAYTS+ ALEAKLKHAITEGQDHFALD Sbjct: 1 MSDLDTEGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSRAALEAKLKHAITEGQDHFALD 92
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE) HSP 1 Score: 191 bits (484), Expect = 2.990e-54 Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 297 VKWLA VMS LD GRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPD+HLPSCSTCQVYLKLPAYTS+ ALEAKLKHAITEGQDHFALD Sbjct: 2260 VKWLARVMSELDTEGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSRAALEAKLKHAITEGQDHFALD 2358
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A835Z7D6_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D6_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.100e-33 Identity = 64/99 (64.65%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 297 V L V+S LD RR FL FVTG+PRLP+GGF AL+PRLTVV+K+ PD HLPSCSTCQVYLKLPAYT K L AKL AI EG++HFALD Sbjct: 245 VAALVEVLSELDAAQRRAFLSFVTGSPRLPLGGFAALQPRLTVVRKDTP-----RPDEHLPSCSTCQVYLKLPAYTCKAVLRAKLLQAINEGREHFALD 338
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A2R5GSN0_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSN0_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.710e-28 Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 297 ++ L V+S LD RR F++F+TG+PRLP+GGFG LRPRLTVV+K V PD LPSCSTCQVYLKLP Y+S+ L+ +L A+ EGQ HFALD Sbjct: 2700 IRDLVHVLSELDGSDRRLFMQFLTGSPRLPVGGFGELRPRLTVVRKNV----ADDPDGILPSCSTCQVYLKLPPYSSREVLKRRLLQAVREGQGHFALD 2794
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A7S1CCF7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCF7_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.170e-25 Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFAL 294 V+ L V+S LDP RRQFL F TG+PRLP+GGF AL PRLT+V+K+ LPG +PD LPS STC YLKLP YTSK + +L AIT+G F L Sbjct: 2026 VQMLVEVLSDLDPVLRRQFLLFTTGSPRLPVGGFNALLPRLTIVQKKP--LPGRSPDASLPSASTCTNYLKLPQYTSKEIMHERLVRAITDGAGAFHL 2121
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A482RGR4_9ARCH (HECT domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RGR4_9ARCH) HSP 1 Score: 99.4 bits (246), Expect = 3.100e-24 Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVK------KEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 297 V+ L V+ RR F+RF+TG PRLP GGFGAL+P LT+V+ +E D L LP+CSTC VYLKLPAY+SK L AKL AI EGQ+ FA D Sbjct: 79 VRALLEVLHEFSAAERRLFMRFITGAPRLPSGGFGALQPPLTIVRTAAHDREEADAL--------LPTCSTCHVYLKLPAYSSKTQLRAKLLLAIREGQEVFAFD 175
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: UPI001C918089 (E3 ubiquitin-protein ligase TRIP12-like n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C918089) HSP 1 Score: 102 bits (254), Expect = 3.070e-23 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 10 LAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFAL 294 L V+S LDP RRQFL F TG+PRLP+GGF AL P LTVV+K V+ PG +PDT+LPS TC YLKLP Y+S +L AI+EGQ F L Sbjct: 978 LVTVLSELDPRQRRQFLSFATGSPRLPVGGFRALTPPLTVVRKAVE--PGHSPDTYLPSVMTCVNYLKLPEYSSVEVTRRQLTLAISEGQLSFML 1070
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A6A4X1F7_AMPAM (E3 ubiquitin-protein ligase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4X1F7_AMPAM) HSP 1 Score: 101 bits (252), Expect = 5.780e-23 Identity = 55/95 (57.89%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 10 LAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFAL 294 L V+S LDP RRQFL F TG+PRLP+GGF AL P LTVV+K V+ PG PDT+LPS TC YLKLP Y+S +L AI+EGQ F L Sbjct: 1362 LVTVLSELDPRQRRQFLSFATGSPRLPVGGFRALTPPLTVVRKAVE--PGHCPDTYLPSVMTCVNYLKLPEYSSVEVTRRQLTLAISEGQLSFML 1454
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A0C4ESY2_PUCT1 (HECT-type E3 ubiquitin transferase n=3 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4ESY2_PUCT1) HSP 1 Score: 100 bits (249), Expect = 1.480e-22 Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFAL 294 ++ L +MSS D RRQFL+F+TG P+LPIGGF L P LTVV+K + PG +PD +LPS TC YLKLP Y+S+ KL AI EG D F L Sbjct: 1892 IRGLINIMSSYDVPSRRQFLQFITGAPKLPIGGFRGLHPALTVVRKAAE--PGHSPDEYLPSVMTCVNYLKLPEYSSQDVAAEKLTIAIKEGADSFHL 1987
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Match: A0A7S1G2E8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G2E8_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.490e-22 Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 1 VKWLAGVMSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDTHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 297 V+ L +MS RR FLRFVTG PRLP+GGF +LRP LT+VK PG D +P+C C VYLKLPAYT V L KL AI +GQ+ F +D Sbjct: 2812 VQQLVSIMSEFTTQERRLFLRFVTGAPRLPMGGFASLRPPLTIVKTVPP--PGRIADEMMPTCMVCSVYLKLPAYTEPVVLRDKLHMAIRDGQESFEMD 2908 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14127.3077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14127.3077.1 >prot_L-elsbetiae_contig14127.3077.1 ID=prot_L-elsbetiae_contig14127.3077.1|Name=mRNA_L-elsbetiae_contig14127.3077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp MSSLDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDback to top mRNA from alignment at L-elsbetiae_contig14127:2751..4563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14127.3077.1 ID=mRNA_L-elsbetiae_contig14127.3077.1|Name=mRNA_L-elsbetiae_contig14127.3077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1813bp|location=Sequence derived from alignment at L-elsbetiae_contig14127:2751..4563- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14127:2751..4563- >mRNA_L-elsbetiae_contig14127.3077.1 ID=mRNA_L-elsbetiae_contig14127.3077.1|Name=mRNA_L-elsbetiae_contig14127.3077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig14127:2751..4563- (Laminarionema elsbetiae ELsaHSoW15)back to top |