prot_L-elsbetiae_contig13914.2945.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13914.2945.1
Unique Nameprot_L-elsbetiae_contig13914.2945.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
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BLAST of mRNA_L-elsbetiae_contig13914.2945.1 vs. uniprot
Match: A0A6H5KLK6_9PHAE (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK6_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.110e-13
Identity = 52/99 (52.53%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:    1 MAVGDFTEFKGMMVAHRKGRENGLVLTAAPVAIEAAMEARGGRQEQAKRGDAGVPSTG--VSGAGGIPTRG---------AGRRREVSGA-ANTAESKW 87
            MAVGDF EFKGMMVAHRKGR+NGLV+T+A    E   EA+ G     +RG  G PS G   SG GG   +          AGRRR  S A + TAESKW
Sbjct:  131 MAVGDFAEFKGMMVAHRKGRDNGLVVTSASAGEE---EAKTGWHRHVERGGVGDPSAGSTASGKGGSARQTCTVAGVGETAGRRRGTSDAFSTTAESKW 226
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BLAST of mRNA_L-elsbetiae_contig13914.2945.1 vs. uniprot
Match: D7FPD1_ECTSI (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD1_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.380e-10
Identity = 50/99 (50.51%), Postives = 57/99 (57.58%), Query Frame = 0 
Query:    1 MAVGDFTEFKGMMVAHRKGRENGLVLTAAPVAIEAAMEARGGRQEQAKRGDAGVPSTG--VSGAGGIPTRG---------AGRRREVSGAANTA-ESKW 87
            MAVGDF EFKGMMVAHRKGR+NGLV+T++ V  E   EA+ G  + A RG    PS G   S  GG   +          AG RR    A NTA ESKW
Sbjct:  140 MAVGDFAEFKGMMVAHRKGRDNGLVVTSSSVGEE---EAKTGWHQHAGRGGVVDPSAGPTASAEGGSARQTCTVAGVGETAGIRRGTPDAFNTAAESKW 235
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13914.2945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLK6_9PHAE1.110e-1352.53ADP-ribosylation factor-like protein 2-binding pro... [more]
D7FPD1_ECTSI1.380e-1050.51ADP-ribosylation factor-like protein 2-binding pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13914contigL-elsbetiae_contig13914:1601..1864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13914.2945.1mRNA_L-elsbetiae_contig13914.2945.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13914 1303..2888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13914.2945.1 ID=prot_L-elsbetiae_contig13914.2945.1|Name=mRNA_L-elsbetiae_contig13914.2945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
MAVGDFTEFKGMMVAHRKGRENGLVLTAAPVAIEAAMEARGGRQEQAKRG
DAGVPSTGVSGAGGIPTRGAGRRREVSGAANTAESKW*
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