prot_L-elsbetiae_contig13902.2935.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig13902.2935.1
Unique Name	prot_L-elsbetiae_contig13902.2935.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	111

Homology

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: D7FP55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP55_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 6.330e-66
Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGGEASEQA 110
            PPTPDPLSTTTAVKVLIDQFVQAP+FTVVIFGVLGLLEGK VADIREQL+QDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKG GEA E+A
Sbjct:   88 PPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLNQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA 197

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A6H5L0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V0_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.160e-65
Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGGEASEQA 110
            PPTPDPLSTTTAVKVLIDQFVQAP+FTVVIFGVLGLLEGK VADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKG GEA E+A
Sbjct:  163 PPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA 272

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A7S3PZB9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.360e-43
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGGEASEQ 109
            PPT DPLS TT +KV+IDQFVQAP+FTV+IF  LGLLEGK+ +D++EQLD+DYK TM ANW ++VPA  VN+AFCPP LRVLFLN VFF W+IFLS  ++  G EA ++
Sbjct:  151 PPTEDPLSATTGIKVVIDQFVQAPIFTVIIFFFLGLLEGKSASDVKEQLDRDYKDTMFANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNSDGEEAPKE 259

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: B8BXV6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV6_THAPS)

HSP 1 Score: 148 bits (373), Expect = 5.030e-43
Identity = 69/101 (68.32%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 101
            PPTPDP + TT +KVL+DQF+QAP+FTV+IF  LG LEGKTV +I++QLD DY  TMLANW ++VPA  VN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:   91 PPTPDPFTATTGIKVLVDQFIQAPIFTVIIFAFLGFLEGKTVEEIKKQLDDDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 191

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A7S1YNW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNW0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 6.160e-42
Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 101
            PPT DP ++TTA+KV+IDQF+QAP+FTV+IFG LG+LEGK++  I+EQLD+DY  TMLANW ++VPA  VN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:  171 PPTEDPFTSTTAIKVIIDQFIQAPIFTVIIFGFLGVLEGKSLDSIKEQLDEDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 271

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A7R9W596_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W596_9STRA)

HSP 1 Score: 147 bits (370), Expect = 9.500e-42
Identity = 76/110 (69.09%), Postives = 90/110 (81.82%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGGGEASEQA 110
            PPT +P +TTT VKV+IDQFVQAP+FTV+IF  LGLLEGKT   I+ QLD+DYK TMLANW ++VPA VVN+AFCPP LRVLFLNVVFF W+IFLS  ++K   E S+QA
Sbjct:  154 PPTVEPWTTTTGVKVVIDQFVQAPIFTVLIFIFLGLLEGKTTDAIKSQLDEDYKDTMLANWKLWVPATVVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNKNE-EPSQQA 262

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A7S2GUW6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GUW6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.290e-41
Identity = 70/101 (69.31%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 101
            PPT DP +TTT VKV+IDQF+QAP+FTV+IFG LG LEGKT+  I++QLD DY  TMLANW ++VPA VVN+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:  150 PPTEDPFTTTTGVKVVIDQFIQAPIFTVLIFGFLGALEGKTLDSIKKQLDDDYTDTMLANWKLWVPATVVNIAFCPPVLRVLFLNCVFFFWSIFLSLKLNK 250

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A7S2W2E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2E8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 8.720e-41
Identity = 69/101 (68.32%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 101
            PPT DP +TTT +KV IDQFVQAPVFTV+IF  LGLLEGKT+  +++QLD DYK TM+ANW ++VPA  VN+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:  136 PPTADPFTTTTGIKVAIDQFVQAPVFTVLIFYFLGLLEGKTMESVKQQLDNDYKDTMIANWKLWVPATAVNIAFCPPLLRVLFLNCVFFFWSIFLSLKLNK 236

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: K0R1J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1J6_THAOC)

HSP 1 Score: 144 bits (363), Expect = 1.020e-40
Identity = 69/101 (68.32%), Postives = 82/101 (81.19%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 101
            PPT DP + TT VKVLIDQFVQAP+FTV+IF  LG LEGKT  +I++QLD DYK TM+ANW ++VPA  VN+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:  151 PPTEDPFTATTGVKVLIDQFVQAPIFTVIIFAFLGFLEGKTSEEIKQQLDDDYKDTMIANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNK 251

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BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Match: A0A7S2XVN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN5_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.650e-39
Identity = 70/101 (69.31%), Postives = 82/101 (81.19%), Query Frame = 0

Query:    1 PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 101
            PPT D  +TTTAVKV IDQFVQAPVFTV+IF  LGLLEGK ++ IR QL  DY ST+ ANW ++VPAA  NLAFCPP+LRVLF N+VFF W+IF+S VV+K
Sbjct:  139 PPTEDAFTTTTAVKVFIDQFVQAPVFTVLIFVALGLLEGKALSSIRTQLKDDYWSTLQANWKLWVPAATFNLAFCPPQLRVLFTNLVFFFWSIFISLVVNK 239

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig13902.2935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FP55_ECTSI	6.330e-66	94.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L0V0_9PHAE	1.160e-65	95.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3PZB9_9STRA	1.360e-43	66.06	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
B8BXV6_THAPS	5.030e-43	68.32	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
A0A7S1YNW0_9STRA	6.160e-42	68.32	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A7R9W596_9STRA	9.500e-42	69.09	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S2GUW6_9STRA	2.290e-41	69.31	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S2W2E8_9STRA	8.720e-41	68.32	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
K0R1J6_THAOC	1.020e-40	68.32	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2XVN5_9STRA	4.650e-39	69.31	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 35..96 e-value: 4.9E-21 score: 74.7
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 10..100
None	No IPR available	PANTHER	PTHR11266:SF80	PEROXISOMAL MEMBRANE PROTEIN 2	coord: 10..100
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..57
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 75..79
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..37
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 58..74
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 100..110
None	No IPR available	TMHMM	TMhelix		coord: 57..76
None	No IPR available	TMHMM	TMhelix		coord: 81..100
None	No IPR available	TMHMM	TMhelix		coord: 15..37

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig13902	contig	L-elsbetiae_contig13902:1..2207 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig13902.2935.1	mRNA_L-elsbetiae_contig13902.2935.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig13902 1..2207 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig13902.2935.1 ID=prot_L-elsbetiae_contig13902.2935.1|Name=mRNA_L-elsbetiae_contig13902.2935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
PPTPDPLSTTTAVKVLIDQFVQAPVFTVVIFGVLGLLEGKTVADIREQLD
QDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVS
KGGGEASEQA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007248	Mpv17_PMP22