prot_L-elsbetiae_contig13890.2929.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13890.2929.1
Unique Nameprot_L-elsbetiae_contig13890.2929.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length207
Homology
BLAST of mRNA_L-elsbetiae_contig13890.2929.1 vs. uniprot
Match: D7FVG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG5_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 9.550e-13
Identity = 73/181 (40.33%), Postives = 88/181 (48.62%), Query Frame = 0
Query:    1 MFHVQSAASSGAPS-LIPHCWDAYP----------VRSEGAXXXXXXXXXXXARLLRCFLSLPSSSPLSLSPSCSANEGRGTRRRRGRHANNKRMVHTVGSRVQVTSNSXXXXXXXXXXXXXXXXASSPEVLPEWLGRLGLDKEEEDNLVAAFAALPXXXXXXXADAKLMHAARDLVVSMK 170
            MF VQS  SSG P  LI + WDA P          +R                RLLRCFLSLPSSS LS  PS + ++ R +   R R A  +  VH   +  QV+S+                 A +PE  P W+GRLGLD+              XXXXXXXADAKL+ A R+LVVSMK
Sbjct:    1 MFAVQSVPSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHGSSIGGSTRLLRCFLSLPSSS-LS-PPSAAVDDSRNSXXXRSRSAKERHPVHGAVACQQVSSSGPTTASAA---------APAPETPPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXXXADAKLVQATRELVVSMK 170          
BLAST of mRNA_L-elsbetiae_contig13890.2929.1 vs. uniprot
Match: A0A6H5JCT3_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT3_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 7.020e-11
Identity = 69/182 (37.91%), Postives = 86/182 (47.25%), Query Frame = 0
Query:    1 MFHVQSAASS-GAPSLIPHCWDAYP----------VRSEGAXXXXXXXXXXXARLLRCFLSLPSSSPLSLSPSCSANEGRGTRRRRGRHANNKRMVHTVGSRVQVTSNSXXXXXXXXXXXXXXXXASSPEVLPEWLGRLGLDKEEEDNLVAAFAALPXXXXXXXADAKLMHAARDLVVSMKK 171
            MF +QSA +S     LI + WDA P          +R                RLLRCFLSLPSSS LS  PS + ++ R       R A  +  VH   +  QV+S+S                A +PE LP W+GRLGLD+              XXXXX  ADAKL+ A R+LVVSMK+
Sbjct:    1 MFALQSAPTSCPLRPLIANFWDACPFLGERGGAEGIRGGIGDGRHGSSIGGSTRLLRCFLSLPSSS-LS-PPSAAVDDSRNXXXXXSRSAEERHPVHGAQACQQVSSSSPTTASAT---------APAPETLPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXSAADAKLVQATRELVVSMKR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13890.2929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVG5_ECTSI9.550e-1340.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCT3_9PHAE7.020e-1137.91Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13890contigL-elsbetiae_contig13890:3703..4323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13890.2929.1mRNA_L-elsbetiae_contig13890.2929.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13890 2882..4323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13890.2929.1 ID=prot_L-elsbetiae_contig13890.2929.1|Name=mRNA_L-elsbetiae_contig13890.2929.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MFHVQSAASSGAPSLIPHCWDAYPVRSEGAGAGGGGGGASSARLLRCFLS
LPSSSPLSLSPSCSANEGRGTRRRRGRHANNKRMVHTVGSRVQVTSNSSS
GGGSGGAALAAAATASSPEVLPEWLGRLGLDKEEEDNLVAAFAALPEPPP
PAAADAKLMHAARDLVVSMKKQERAVTKAKAKAGSPNGGIAVEAEKKIRT
REQANKA
back to top