prot_L-elsbetiae_contig1389.2924.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1389.2924.1
Unique Nameprot_L-elsbetiae_contig1389.2924.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length324
Homology
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BLAST of mRNA_L-elsbetiae_contig1389.2924.1 vs. uniprot
Match: D8LAV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV7_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.680e-41
Identity = 118/218 (54.13%), Postives = 131/218 (60.09%), Query Frame = 0 
Query:    2 PKRSRPP---VAELALRPPARCDDEVSEEFEAKARRRSATRAALAAGPFSTAGGGXXXXXXXXGR---IFDSGGSGDGRWRKLHARGGGGEDGPPRLKLSVETA----GDGDEVLLSPSDHHQGAPRELEGGAPPARSYCSSPVSLSSGSERTPG------LRDGRDRNDQLVSSVDSAWSMGSIDETAARELRNTREEDRTSGADPVARVLLCQSDD 203
            PKR R P    A L L PP  CD+ VS EFEAKARRRSA R A  A     +           G    + DSGGS  GRWRKL ARGGGG  GPPRLKLSVE+A    G+ DEVLLSP  H    P +L     PA  +C+SP+ + S   R+ G      LR G + N  L SSVDSAWSMGSIDETAARE  NTR  DR SG DPVAR+LL QSDD
Sbjct:  248 PKRGRSPSVAAAGLTLLPPISCDEAVSWEFEAKARRRSAVRNAKTAAELFDSNSSTCCVTPAGGDGDGVGDSGGSVGGRWRKLQARGGGGSAGPPRLKLSVESAVAAAGEDDEVLLSPCCH---GPVDL-----PA--FCASPILVPSSGVRSGGGGGGRPLRGGAEEN-VLTSSVDSAWSMGSIDETAAREPSNTRNNDRASGGDPVARMLLSQSDD 454
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BLAST of mRNA_L-elsbetiae_contig1389.2924.1 vs. uniprot
Match: A0A6H5JPD1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD1_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 3.770e-37
Identity = 109/219 (49.77%), Postives = 125/219 (57.08%), Query Frame = 0 
Query:    2 PKRSRPP---VAELALRPPARCDDEVSEEFEAKARRRSATRAALAAGPFSTAGGGXXXXXXXXGR-IFDSGGSGDGRWRKLHARGGGGEDGPPRLKLSVETA----GDGDEVLLSPSDHHQGAPRELEGGAPPARSYCSSPVSLSSGSERTPG---------LRDGRDRNDQLVSSVDSAWSMGSIDETAARELRNTREEDRTSGADPVARVLLCQSDD 203
            PKR R P    A L   PP  CD+ +S EFEA+ARRRSA R +  A     +           G  +  SGGS DGRWRKL ARGGGG  GPPRLKLSVE+A    G+ DEVLLSP  H          G     ++C+SPV ++S   R            LR G +  D L SSVDSAWS+GSIDETAARE   TR  DR SG+DPVAR LLCQ DD
Sbjct:  246 PKRGRSPSVVAAGLTPLPPVSCDEALSWEFEARARRRSAVRKSKTATELLDSNSSTCCVTPAGGDDVSHSGGSMDGRWRKLQARGGGGPAGPPRLKLSVESAVVAAGEDDEVLLSPCCH----------GPVDVPAFCTSPVLVASSGVRNGXXXXXXXXRPLRGGPEE-DVLTSSVDSAWSIGSIDETAAREPSCTRHNDRASGSDPVARTLLCQPDD 453
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1389.2924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAV7_ECTSI1.680e-4154.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPD1_9PHAE3.770e-3749.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1389contigL-elsbetiae_contig1389:5346..7846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1389.2924.1mRNA_L-elsbetiae_contig1389.2924.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1389 5206..9235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1389.2924.1 ID=prot_L-elsbetiae_contig1389.2924.1|Name=mRNA_L-elsbetiae_contig1389.2924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp
MPKRSRPPVAELALRPPARCDDEVSEEFEAKARRRSATRAALAAGPFSTA
GGGGSGGSGGSGRIFDSGGSGDGRWRKLHARGGGGEDGPPRLKLSVETAG
DGDEVLLSPSDHHQGAPRELEGGAPPARSYCSSPVSLSSGSERTPGLRDG
RDRNDQLVSSVDSAWSMGSIDETAARELRNTREEDRTSGADPVARVLLCQ
SDDCGINAAVLTAAAAEGEDGGENNNDGVRSSAGGDGGSPSPPAAVGDAA
GVDASSPRAFEAAGGGGGGAAAASVFGWPAAKGGRFDAPRSGLFSLGSRS
AGIGDAGAVPRTRLFKPVACPPP*
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