prot_L-elsbetiae_contig13863.2910.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13863.2910.1
Unique Nameprot_L-elsbetiae_contig13863.2910.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length242
Homology
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BLAST of mRNA_L-elsbetiae_contig13863.2910.1 vs. uniprot
Match: A0A6H5KQ06_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ06_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.080e-25
Identity = 55/162 (33.95%), Postives = 96/162 (59.26%), Query Frame = 0 
Query:    1 MAKAGLCGILLKDYVPNV-------TVSNSGASDSKPTTRPGEKKTNGIVNYIFASYSYAFIGDTKKQFSDGEEPTEHNNILLAIAKKIYPQARAGHKNWMSSLIGGIGTGRSYMHVDTRGAVAGICIKVLQ-AVDDEGGYLFITDIFRGAREYLQKMDVND 154
            + KA LCG+L+    P++       + + SG + S+   + GE+ TNG++N I  +YSYAF+GD KK+FS+G+ P+  NN  +A+   +YP+A++G K W    I G+ T R+ +H D R A+  +C+ +++ A         + D+FR A+  ++ M++ D
Sbjct:  104 LVKAALCGMLMYKTAPSMYSAIKPDSDNGSGNNGSREKVK-GERSTNGVINRIMVTYSYAFVGDAKKRFSEGKLPSARNNPFVAVGAMVYPKAQSGAKTWEREFIDGVTTARAGVHSDARKAMVTLCLHLVRIAAKSHPDLRHLPDLFRAAKAAMRDMELKD 264
[Close]
BLAST of mRNA_L-elsbetiae_contig13863.2910.1 vs. uniprot
Match: A0A6H5KJF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.420e-15
Identity = 38/100 (38.00%), Postives = 64/100 (64.00%), Query Frame = 0 
Query:    1 MAKAGLCGILLKDYVPNV-------TVSNSGASDSKPTTRPGEKKTNGIVNYIFASYSYAFIGDTKKQFSDGEEPTEHNNILLAIAKKIYPQARAGHKNW 93
            + KA LCG+L+ +   ++       + + SG + S+   + GE+ TNG++N I  +YSYAF+GD KK+FS+G+ P+  NN  +A+   +YP+A++G K W
Sbjct:  236 LVKAALCGMLMYETAHSMYSAIKPDSDNGSGNNGSREKVK-GERSTNGVINRIMVTYSYAFVGDAKKRFSEGKLPSARNNPFVAVGAMVYPKAQSGAKTW 334
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13863.2910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQ06_9PHAE3.080e-2533.95Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJF6_9PHAE1.420e-1538.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 227..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13863contigL-elsbetiae_contig13863:1400..2724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13863.2910.1mRNA_L-elsbetiae_contig13863.2910.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13863 532..3543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13863.2910.1 ID=prot_L-elsbetiae_contig13863.2910.1|Name=mRNA_L-elsbetiae_contig13863.2910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
MAKAGLCGILLKDYVPNVTVSNSGASDSKPTTRPGEKKTNGIVNYIFASY
SYAFIGDTKKQFSDGEEPTEHNNILLAIAKKIYPQARAGHKNWMSSLIGG
IGTGRSYMHVDTRGAVAGICIKVLQAVDDEGGYLFITDIFRGAREYLQKM
DVNDPASGRSETLIVREYKVWPLTRPLGLQARVQGNAKYTFCEVPECCLP
AYTLIYLFYAALLSTQIGISCFLNNATISPKNTRQQEANGE*
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