prot_L-elsbetiae_contig13814.2886.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13814.2886.1
Unique Nameprot_L-elsbetiae_contig13814.2886.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length81
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig13814.2886.1 vs. uniprot
Match: A0A6H5L5K6_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K6_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 8.620e-7
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:   18 SNPWDVFGSDSDEEPSAXXXXXXXXXXXXXXXXXXXHLSAAKKKQRRYAWEALLPTFRFPAGFD 81
            ++PWDVFGSDSDE+  A  XXXXXXXXXXX       L  A++K+  YAWE+LLP F+FP GFD
Sbjct:    2 ADPWDVFGSDSDEDQPAAIXXXXXXXXXXXPAAVS--LPTARRKKILYAWESLLPRFQFPPGFD 63
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13814.2886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5K6_9PHAE8.620e-760.94SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13814contigL-elsbetiae_contig13814:1372..3044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13814.2886.1mRNA_L-elsbetiae_contig13814.2886.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13814 1372..3044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13814.2886.1 ID=prot_L-elsbetiae_contig13814.2886.1|Name=mRNA_L-elsbetiae_contig13814.2886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=81bp
RSPLRRQDVRETRKSMASNPWDVFGSDSDEEPSAATPTPTLAAAAAAAAA
AAAHLSAAKKKQRRYAWEALLPTFRFPAGFD
back to top