prot_L-elsbetiae_contig13803.2876.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13803.2876.1
Unique Nameprot_L-elsbetiae_contig13803.2876.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length170
Homology
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BLAST of mRNA_L-elsbetiae_contig13803.2876.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 2.440e-6
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    1 MSTGKADVPPRSRDCVKAHQGAIKVTQAIAAALRGA 36
            M+TGKADVPPRSRDCVKAH  AI   +AIAAALR A
Sbjct:  332 MTTGKADVPPRSRDCVKAHNSAIDTAKAIAAALRNA 367
[Close]
BLAST of mRNA_L-elsbetiae_contig13803.2876.1 vs. uniprot
Match: A0A6H5JQJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ4_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.920e-6
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    1 MSTGKADVPPRSRDCVKAHQGAIKVTQAIAAALRGA 36
            M+TGKADVPPRSRDCVKAH  A+   +AIAAALR A
Sbjct:  210 MNTGKADVPPRSRDCVKAHNSAVDTAKAIAAALRNA 245
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13803.2876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP86_ECTSI2.440e-677.78Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JQJ4_9PHAE2.920e-675.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13803contigL-elsbetiae_contig13803:197..2000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13803.2876.1mRNA_L-elsbetiae_contig13803.2876.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13803 197..2000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13803.2876.1 ID=prot_L-elsbetiae_contig13803.2876.1|Name=mRNA_L-elsbetiae_contig13803.2876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp
MSTGKADVPPRSRDCVKAHQGAIKVTQAIAAALRGANDGAPAEGSTGDKR
ASAPSSPTTTPEQRAAAPPAVDEQETEQRPEAPTPSATTPVGAGGEDAAA
AATATATAAAAAPFAAGDSSGASSAGGSSAGVSDGGGASVVVVGQKKGGE
SGGGGRGARPVLTLMQHLCV
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