prot_L-elsbetiae_contig10236.284.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10236.284.1
Unique Nameprot_L-elsbetiae_contig10236.284.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length534
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10236.284.1 vs. uniprot
Match: D7FTG1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTG1_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 2.180e-31
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0 
Query:  449 VDPLLEKRNAVDEVTRQLQDILREDALQDDGTHDYSAAFELFDVDHDGNATTDELHSIFLRLGMGNLLDEEGIAMVVDRVPRNASG 534
            VDPL E RN +DEVTR+LQ +LREDALQDDG+ DYSAAFE+FDVDHDGNAT DELHSIF+RLGMG+LL EEGIA++VDRVPR+ SG
Sbjct:   93 VDPLFEARNKIDEVTRELQRLLREDALQDDGSLDYSAAFEIFDVDHDGNATPDELHSIFIRLGMGSLLSEEGIAVIVDRVPRDPSG 178
[Close]
BLAST of mRNA_L-elsbetiae_contig10236.284.1 vs. uniprot
Match: A0A6H5L2T5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T5_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.020e-20
Identity = 67/144 (46.53%), Postives = 77/144 (53.47%), Query Frame = 0 
Query:  449 VDPLLEKRNAVDEVTRQLQDILREDALQDDGTH---DYSAAFELFDVDHDGNATTDELHSIFLR-------------------------------------------------------LGMGNLLDEEGIAMVVDRVPRNASG 534
            VDPL E RN +DEVTR+LQ +LREDALQDDG     DYSAAFE+FD+D+DGNAT DELHSIF+R                                                       LGMGNLL EEGIA++VDRVPR+ SG
Sbjct:   93 VDPLFEARNKIDEVTRELQRLLREDALQDDGGEGSLDYSAAFEIFDMDNDGNATPDELHSIFIRCTLHLGSESHVARARPKAPLDLWWQDRGRVSAVRLALTLGVEVSSDGRSSWCSRRLGMGNLLSEEGIAVIVDRVPRDPSG 236
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10236.284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTG1_ECTSI2.180e-3179.07EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L2T5_9PHAE1.020e-2046.53EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 452..472
NoneNo IPR availableGENE3D1.10.238.10coord: 449..534
e-value: 3.0E-6
score: 29.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..132
e-value: 1.3E-5
score: 26.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 478..513
score: 10.692
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 476..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10236contigL-elsbetiae_contig10236:1273..4814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10236.284.1mRNA_L-elsbetiae_contig10236.284.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10236 1273..4814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10236.284.1 ID=prot_L-elsbetiae_contig10236.284.1|Name=mRNA_L-elsbetiae_contig10236.284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp
RQLFDVAKSGDVRSLKSLLRQSRTTTVGGINFQYSAKVAEGAGINLWPWY
WCIDTRDDITRCWGAPAGIEPEAGDTLLMITLKIGMEDHVQIILDHGALN
LGIRNSSGRDAAGIAATHGRESLIPRLRARFDDQQQGPKASTLGRRRRRE
QRHIRLAKHFPRNSIYPDVPSSCYQVASKGAFGAAGAPGVILCKRIIDDE
HADEEISPPGGQQQVDSERKSSVRVGGATSHLSESCDVHPSPGETMAVAV
QTDPERVCARDATAPSTVPSKAQHTRGCQTPGALSPMPLVGSTDNARLQR
RSTAPGDMLSHSLGAWHSALPSTKSGEFGRRKLPNTWESVHNTDPFASTS
LHRKMMEQRRPEASTADENLAGSISGSAFSSELHRKGPETPPTAKVDERE
PSPCDNGGETGNPVVRGQGDFVLRQQGTPRPGGGSSADSGDDSSPPGAVD
PLLEKRNAVDEVTRQLQDILREDALQDDGTHDYSAAFELFDVDHDGNATT
DELHSIFLRLGMGNLLDEEGIAMVVDRVPRNASG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair