prot_L-elsbetiae_contig1372.2832.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1372.2832.1
Unique Nameprot_L-elsbetiae_contig1372.2832.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length103
Homology
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 8.790e-35
Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 0
Query:    3 NSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 98
            N I YS  YVDG FEYRH+ LP   A  LPQSRLL+E E + LGVQQSRGW+HY++H PEP+ILLFRR LGT+PVTG VD E  R A++ + ++LS
Sbjct:    2 NRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELS 97          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7R9U1M9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.090e-33
Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    5 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLSQD 100
            I YS  Y D  FEYRH+ LP  +A RL +++LLS+AE + LGVQQSRGWEHY+IHRPEP+ILLFRR LGTDP TG VD E  R A++A+++ L+++
Sbjct:   41 IEYSEKYNDQDFEYRHVILPKELAKRLSKTKLLSDAEWRELGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDPEAQREAKEAYMRSLTEN 136          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.290e-33
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    1 MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAF 93
            M + I YS  Y D  FEYRH+ LP  +A  LP++RLL E E + +GVQQSRGW+HY+IHRPEP+ILLFRR LGTDPVTG VD E  R A+ A+
Sbjct:   20 MASRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAY 112          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A812N3A3_9DINO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812N3A3_9DINO)

HSP 1 Score: 118 bits (296), Expect = 1.230e-32
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    1 MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAF 93
            M + I YS  Y DG FEYRH+ LP  +A  + + RLLSEAE + +GVQQSRGWEHY+IH+PEP+ILLFRRALGTDP TG V+      A++AF
Sbjct:    1 MASRIEYSEKYSDGDFEYRHVILPKELAKSMARGRLLSEAEWRGIGVQQSRGWEHYAIHKPEPHILLFRRALGTDPTTGKVNAAAAAAAREAF 93          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO)

HSP 1 Score: 116 bits (291), Expect = 7.070e-32
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    5 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQ 96
            I YS  Y D   EYRH+ LP  +A  LP+SRLL+E+E +S+GVQQSRGW+HY+IHRPEP+ILLFRR LGTDP +G VD E L+ A++ +  Q
Sbjct:    7 IEYSEKYADEVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEYKDQ 98          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 116 bits (291), Expect = 7.280e-32
Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    1 MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 98
            M + I YS  Y+D   EYRH+ LP  IA  LP+ RLL+E+E + +GVQQSRGW+HY+IHRPEP+ILLFRR LGTDPVTG V+ E  R A++ + + ++
Sbjct:    1 MASRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMN 98          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.270e-31
Identity = 54/96 (56.25%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    5 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLSQD 100
            I YS  Y D  FEYRH+ LP  +A  +P++R+L+E E ++LGVQQSRGWEHY+IHRPEP+ILLFRR LGTDP TG VD +  R A++++++ L ++
Sbjct:   38 IEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLREN 133          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S3P5A6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5A6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.300e-31
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 0
Query:    5 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQ 96
            I YS  Y D   EYRH+ LP  +A  LP+SRLL+E+E +S+GVQQSRGW+HY+IHRPEP+ILLFRR LGTDP +G +D E  R A+  +  Q
Sbjct:   38 IEYSEKYADDVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRIDPELARAARDEYKNQ 129          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 8.450e-31
Identity = 54/94 (57.45%), Postives = 71/94 (75.53%), Query Frame = 0
Query:    5 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 98
            I YS  Y DG +EYRH+ LP   A  LP++R L+E E +++GVQQSRGWEHY+ H+PEP+ILLFRR LGTDPV+G VD E  R A++ + Q+L+
Sbjct:    6 IEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99          
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.230e-30
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    5 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAF 93
            I YS  Y D  +EYRH+ LP  +A  LP++RLLSE E + +GVQQSRGW HY+IHRPEP+ILLFRR LGTDPVTG +D    R A+ A+
Sbjct:   23 IEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAY 111          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2I6_9PHAE8.790e-3562.50Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7R9U1M9_9STRA2.090e-3360.42Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S2BWV6_9STRA5.290e-3361.29Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A812N3A3_9DINO1.230e-3260.22Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A1Z5K5B7_FISSO7.070e-3259.78Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
W7T145_9STRA7.280e-3256.12Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S1UE56_9STRA1.270e-3156.25Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S3P5A6_9STRA7.300e-3158.70Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S3MEH0_9STRA8.450e-3157.45Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S2BBH9_9STRA1.230e-3060.67Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000789Cyclin-dependent kinase, regulatory subunitPRINTSPR00296CYCLINKINASEcoord: 4..18
score: 50.77
coord: 19..33
score: 37.95
coord: 41..55
score: 64.62
coord: 56..70
score: 74.36
IPR000789Cyclin-dependent kinase, regulatory subunitSMARTSM01084CKS_2coord: 4..73
e-value: 2.1E-32
score: 123.6
IPR000789Cyclin-dependent kinase, regulatory subunitPFAMPF01111CKScoord: 5..71
e-value: 3.7E-28
score: 97.6
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilyGENE3D3.30.170.10coord: 1..77
e-value: 7.4E-30
score: 104.6
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilySUPERFAMILY55637Cell cycle regulatory proteinscoord: 3..75
NoneNo IPR availablePANTHERPTHR23415CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7coord: 4..74
NoneNo IPR availablePANTHERPTHR23415:SF31CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 2coord: 4..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1372contigL-elsbetiae_contig1372:11852..14561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1372.2832.1mRNA_L-elsbetiae_contig1372.2832.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1372 11799..15776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1372.2832.1 ID=prot_L-elsbetiae_contig1372.2832.1|Name=mRNA_L-elsbetiae_contig1372.2832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp
MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQS
RGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLSQD
HH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000789Cyclin-dep_kinase_reg-sub
IPR036858Cyclin-dep_kinase_reg-sub_sf