mRNA_L-elsbetiae_contig1372.2832.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.070e-30 Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 60 NSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 347 N I YS YVDG FEYRH+ LP A LPQSRLL+E E + LGVQQSRGW+HY++H PEP+ILLFRR LGT+PVTG VD E R A++ + ++LS Sbjct: 2 NRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELS 97
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7R9U1M9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M9_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.200e-29 Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 66 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLSQD 353 I YS Y D FEYRH+ LP +A RL +++LLS+AE + LGVQQSRGWEHY+IHRPEP+ILLFRR LGTDP TG VD E R A++A+++ L+++ Sbjct: 41 IEYSEKYNDQDFEYRHVILPKELAKRLSKTKLLSDAEWRELGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDPEAQREAKEAYMRSLTEN 136
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA) HSP 1 Score: 120 bits (302), Expect = 5.000e-29 Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 3 Query: 51 EMNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 347 +M + I YS Y D FEYRH+ LP +A LP++RLL E E + +GVQQSRGW+HY+IHRPEP+ILLFRR LGTDPVTG VD E R A+ A+ L+ Sbjct: 19 KMASRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLA 117
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.020e-28 Identity = 57/115 (49.57%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 9 PTLYTTDSPRLAAQEMNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLSQD 353 P + T + Q+ + I YS Y D FEYRH+ LP +A +P++R+L+E E ++LGVQQSRGWEHY+IHRPEP+ILLFRR LGTDP TG VD + R A++++++ L ++ Sbjct: 19 PCEHRTQAKMPNGQDYASRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLREN 133
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A812N3A3_9DINO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812N3A3_9DINO) HSP 1 Score: 118 bits (296), Expect = 1.980e-28 Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 3 Query: 54 MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAF 332 M + I YS Y DG FEYRH+ LP +A + + RLLSEAE + +GVQQSRGWEHY+IH+PEP+ILLFRRALGTDP TG V+ A++AF Sbjct: 1 MASRIEYSEKYSDGDFEYRHVILPKELAKSMARGRLLSEAEWRGIGVQQSRGWEHYAIHKPEPHILLFRRALGTDPTTGKVNAAAAAAAREAF 93
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO) HSP 1 Score: 117 bits (293), Expect = 5.220e-28 Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 66 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQL 344 I YS Y D EYRH+ LP +A LP+SRLL+E+E +S+GVQQSRGW+HY+IHRPEP+ILLFRR LGTDP +G VD E L+ A++ + Q Sbjct: 7 IEYSEKYADEVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEYKDQF 99
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.380e-28 Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 54 MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 347 M + I YS Y+D EYRH+ LP IA LP+ RLL+E+E + +GVQQSRGW+HY+IHRPEP+ILLFRR LGTDPVTG V+ E R A++ + + ++ Sbjct: 1 MASRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMN 98
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S3P5A6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5A6_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.340e-27 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 30 SPRLAAQEMNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQL 344 +P + + I YS Y D EYRH+ LP +A LP+SRLL+E+E +S+GVQQSRGW+HY+IHRPEP+ILLFRR LGTDP +G +D E R A+ + Q Sbjct: 26 NPPFSTMSSASRIEYSEKYADDVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRIDPELARAARDEYKNQF 130
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.130e-27 Identity = 54/94 (57.45%), Postives = 71/94 (75.53%), Query Frame = 3 Query: 66 IVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQLS 347 I YS Y DG +EYRH+ LP A LP++R L+E E +++GVQQSRGWEHY+ H+PEP+ILLFRR LGTDPV+G VD E R A++ + Q+L+ Sbjct: 6 IEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Match: A0A7S2VEK7_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEK7_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.960e-27 Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 33 PRLAAQ-EMNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSRGWEHYSIHRPEPNILLFRRALGTDPVTGLVDRERLRVAQQAFVQQL 344 PR+ + + +I YS Y D EYRH+ LP +A LP+SRLL+E+E + +GVQQSRGW+HY+IHRPEP+ILLFRR LGTDP +G VD E R A+ + Q Sbjct: 11 PRIKVKMSASRNIEYSEKYADDVNEYRHVILPKELAKTLPKSRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELERAARDEYKNQF 115 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1372.2832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1372.2832.1 >prot_L-elsbetiae_contig1372.2832.1 ID=prot_L-elsbetiae_contig1372.2832.1|Name=mRNA_L-elsbetiae_contig1372.2832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp MNNSIVYSGHYVDGCFEYRHITLPDAIASRLPQSRLLSEAELQSLGVQQSback to top mRNA from alignment at L-elsbetiae_contig1372:11799..15776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1372.2832.1 ID=mRNA_L-elsbetiae_contig1372.2832.1|Name=mRNA_L-elsbetiae_contig1372.2832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3978bp|location=Sequence derived from alignment at L-elsbetiae_contig1372:11799..15776+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1372:11799..15776+ >mRNA_L-elsbetiae_contig1372.2832.1 ID=mRNA_L-elsbetiae_contig1372.2832.1|Name=mRNA_L-elsbetiae_contig1372.2832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=618bp|location=Sequence derived from alignment at L-elsbetiae_contig1372:11799..15776+ (Laminarionema elsbetiae ELsaHSoW15)back to top |